BLASTX nr result

ID: Cimicifuga21_contig00009244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009244
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282088.1| PREDICTED: T-complex protein 1 subunit theta...   211   6e-53
ref|XP_002451006.1| hypothetical protein SORBIDRAFT_05g022470 [S...   209   1e-52
ref|XP_003619011.1| T-complex protein 1 subunit theta [Medicago ...   209   2e-52
gb|ACJ54925.1| TCP-1/cpn60 chaperonin [Oryza sativa Japonica Group]   209   2e-52
ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52

>ref|XP_002282088.1| PREDICTED: T-complex protein 1 subunit theta [Vitis vinifera]
           gi|297739754|emb|CBI29936.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score =  211 bits (536), Expect = 6e-53
 Identities = 103/120 (85%), Positives = 112/120 (93%)
 Frame = -1

Query: 360 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSTAILKLSQPNHNDLGYAESIS 181
           VSG AVGEMALHFCERYKLMVLKISSKFELRRFCRTTG+ A+LKLSQPN +DLGY +S+S
Sbjct: 294 VSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVS 353

Query: 180 VEEVGGARVTIVKSEENGNFVSTLVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRIVPG 1
           VEE+GG RVTIVK+EE GN V T+VLRGSTDSILDDLERAVDDGVNTYKAMC+DSRIVPG
Sbjct: 354 VEEIGGVRVTIVKNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPG 413


>ref|XP_002451006.1| hypothetical protein SORBIDRAFT_05g022470 [Sorghum bicolor]
           gi|241936849|gb|EES09994.1| hypothetical protein
           SORBIDRAFT_05g022470 [Sorghum bicolor]
          Length = 548

 Score =  209 bits (533), Expect = 1e-52
 Identities = 101/120 (84%), Positives = 114/120 (95%)
 Frame = -1

Query: 360 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSTAILKLSQPNHNDLGYAESIS 181
           VSGAAVG+MALHFCERYKLMVLKISSKFELRRFCRTTG+ AILKLSQPN  +LGYA+S+S
Sbjct: 296 VSGAAVGDMALHFCERYKLMVLKISSKFELRRFCRTTGAIAILKLSQPNAEELGYADSVS 355

Query: 180 VEEVGGARVTIVKSEENGNFVSTLVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRIVPG 1
           VEE+GG RVT+VK+EE GN V+T+VLRGSTDSILDDLERAVDDGVNTYK+MC+DSRI+PG
Sbjct: 356 VEEIGGTRVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPG 415


>ref|XP_003619011.1| T-complex protein 1 subunit theta [Medicago truncatula]
           gi|355494026|gb|AES75229.1| T-complex protein 1 subunit
           theta [Medicago truncatula]
          Length = 515

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/120 (85%), Positives = 114/120 (95%)
 Frame = -1

Query: 360 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSTAILKLSQPNHNDLGYAESIS 181
           VSG AVGEMALHFCERYKLMVLKISSKFELRRFCRTTGS A+LKL QPN +DLG+A+S+S
Sbjct: 264 VSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSVAMLKLCQPNPDDLGFADSVS 323

Query: 180 VEEVGGARVTIVKSEENGNFVSTLVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRIVPG 1
           VEE+GGARVTIVK+E +GN V+T+VLRGSTDSILDDLERAVDDGVNTYKAMC+DSRIVPG
Sbjct: 324 VEEIGGARVTIVKNEVDGNSVATVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPG 383


>gb|ACJ54925.1| TCP-1/cpn60 chaperonin [Oryza sativa Japonica Group]
          Length = 546

 Score =  209 bits (532), Expect = 2e-52
 Identities = 100/120 (83%), Positives = 116/120 (96%)
 Frame = -1

Query: 360 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSTAILKLSQPNHNDLGYAESIS 181
           VSGAAVG+MALHFCERYKLMVL+ISSKFELRRFCRTTGS A+LKLS+PN ++LGYA+S+S
Sbjct: 296 VSGAAVGDMALHFCERYKLMVLRISSKFELRRFCRTTGSIALLKLSRPNADELGYADSVS 355

Query: 180 VEEVGGARVTIVKSEENGNFVSTLVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRIVPG 1
           VEE+GGARVT+VK+EE GN V+T+VLRGSTDSILDDLERAVDDGVNTYK+MC+DSRI+PG
Sbjct: 356 VEEIGGARVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPG 415


>ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|222862710|gb|EEF00217.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/120 (85%), Positives = 112/120 (93%)
 Frame = -1

Query: 360 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSTAILKLSQPNHNDLGYAESIS 181
           VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTG+ AILKLS PN +DLGY +SIS
Sbjct: 294 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSPPNPDDLGYVDSIS 353

Query: 180 VEEVGGARVTIVKSEENGNFVSTLVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRIVPG 1
           VEE+GG RVT+V++EE GN V T+VLRGSTDSILDDLERAVDDGVNTYKAMC+DSRIVPG
Sbjct: 354 VEEIGGTRVTVVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPG 413


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