BLASTX nr result

ID: Cimicifuga21_contig00009233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009233
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitocho...   187   2e-45
emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]   187   3e-45
ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitocho...   183   4e-44
ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus ...   182   5e-44
ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|1...   179   5e-43

>ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitochondrial [Vitis vinifera]
           gi|297735153|emb|CBI17515.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  187 bits (475), Expect = 2e-45
 Identities = 88/93 (94%), Positives = 93/93 (100%)
 Frame = +2

Query: 191 MEAKFFRFLKIVGVGFKARAEAEGRMLYLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 370
           MEAKFFRFLKIVGVGFKARAE+EGR+L+LKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 60

Query: 371 EKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 469
           +KQRVHQFAAAVRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]
          Length = 102

 Score =  187 bits (474), Expect = 3e-45
 Identities = 87/93 (93%), Positives = 93/93 (100%)
 Frame = +2

Query: 191 MEAKFFRFLKIVGVGFKARAEAEGRMLYLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 370
           MEAKFFRFLKIVGVGFKARAE+EGR+L+LKLGYSHEVELTVPPAVRVFCFKPN+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 60

Query: 371 EKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 469
           +KQRVHQFAAAVRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis
           sativus] gi|449496483|ref|XP_004160146.1| PREDICTED: 60S
           ribosomal protein L6, mitochondrial-like [Cucumis
           sativus]
          Length = 102

 Score =  183 bits (464), Expect = 4e-44
 Identities = 87/93 (93%), Positives = 91/93 (97%)
 Frame = +2

Query: 191 MEAKFFRFLKIVGVGFKARAEAEGRMLYLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 370
           MEAKFFRFLKIVGVG+KARAEA GR+LYLKLGYSHEVELTVPPAVRVFCFK N+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 371 EKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 469
           +KQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 93


>ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus communis]
           gi|223533110|gb|EEF34868.1| 50S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 102

 Score =  182 bits (463), Expect = 5e-44
 Identities = 85/93 (91%), Positives = 92/93 (98%)
 Frame = +2

Query: 191 MEAKFFRFLKIVGVGFKARAEAEGRMLYLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 370
           MEAKFFRFLKIVGVG+KARAE+EGR+LYLKLGYSHEVELTVPPAVRVFCFK N+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 371 EKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 469
           +KQRVHQFAA+VRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|118485475|gb|ABK94593.1|
           unknown [Populus trichocarpa]
           gi|118486815|gb|ABK95242.1| unknown [Populus
           trichocarpa] gi|222853138|gb|EEE90685.1| predicted
           protein [Populus trichocarpa]
          Length = 102

 Score =  179 bits (455), Expect = 5e-43
 Identities = 84/93 (90%), Positives = 91/93 (97%)
 Frame = +2

Query: 191 MEAKFFRFLKIVGVGFKARAEAEGRMLYLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 370
           MEAKFFRFLKIVGVG+KARAEAEGR+L+LKLGYSHEVELTVPPAVRVFCFK N+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAEGRLLFLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 371 EKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 469
           +K RVHQFAA+VRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKGRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


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