BLASTX nr result
ID: Cimicifuga21_contig00009216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00009216
(1771 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 124 8e-26
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554... 122 4e-25
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 120 2e-24
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-23
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera] 113 1e-22
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 124 bits (311), Expect = 8e-26
Identities = 135/473 (28%), Positives = 214/473 (45%), Gaps = 44/473 (9%)
Frame = -3
Query: 1643 SDATDRISSLPESILLHILSFLEMKEVMRTSLVSRNWRYLWSSLPTLTFNYACWRSIHGF 1464
S D IS L +SIL+ ILSFL MK V+ TS++S+ W++LW+ +P L F + R F
Sbjct: 70 SSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFRFR--RRDEHF 127
Query: 1463 MDSIQRALHL-GNSHIHKLSICLDYKPDECRRLNDCINIAVARHVEDFSLRIFSCKNLE- 1290
++SI + L L NS I K I Y+ +N I A ++VE+ L+ +++
Sbjct: 128 VNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRS 187
Query: 1289 --------LPHFLF-TSPIKAFDLRSERFRPVQLPDTICSAAHLKTLRLGSAMFPKGDSK 1137
LP FL+ S I L +P + S LKTL +GS D
Sbjct: 188 SPMDYAHALPQFLYANSSIVKLSLWFCNIKPT----WVISWPSLKTLSIGSVEL-CDDLI 242
Query: 1136 RELSLSCPVLENLVINDCEYGHLKVINVCAPMLKNFVIS---NDYHGPRKCSCKITVCTP 966
E+ CP LE+L ++ C +G + +N+ + LK VI+ + H + KI+ P
Sbjct: 243 EEILSGCPALESLELHHC-FG-INSLNITSASLKKLVINRYWDSSHSHHRSVLKIS--AP 298
Query: 965 NLKSIESNGYIY-GDIVLENLYSLVSVKMAL-----------HVPPIAKCLTVFLKGLHN 822
N++S+ G +Y + ++N+ SL + H K + LK +++
Sbjct: 299 NVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNH 358
Query: 821 ATSLKLATWNFENSSSFRALLNQLSVTFRNLRCLELGRWCDNSWISVMANLLRSSPFIET 642
+L + TW + S F LS NL+CL L + + +ANLL+SS +ET
Sbjct: 359 VKALTVGTWCIQVLSIFEG--KDLSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLET 416
Query: 641 LVLREIE------------AYCDSMKEEEDR----GEDLSSESLFYHLKFVKVDVHYCKG 510
V+ I ++ D +E++ E + + SL +LK VK+
Sbjct: 417 FVINMISPCSQQISVEVGFSFTDLHNFDEEKYWSSREGVLANSLI-NLKTVKIIGVIWNQ 475
Query: 509 SANELKF--LEFLIKNSPILENITITATVQLSRDKERKLAIFGKKLHSLPRAS 357
EL F ++FL+KN+ +LE + I A + L S PRAS
Sbjct: 476 PGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRWSSLNSAQSLLSFPRAS 528
>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
F-box family-3 [Medicago truncatula]
Length = 642
Score = 122 bits (305), Expect = 4e-25
Identities = 124/466 (26%), Positives = 217/466 (46%), Gaps = 33/466 (7%)
Frame = -3
Query: 1703 RIQ*KKLISSNMKKRKKMTTSDATDRISSLPESILLHILSFLEMKEVMRTSLVSRNWRYL 1524
R+ + S+++ K ++ D D IS LPE++LLHILS L K+V+RTS++++ W++L
Sbjct: 158 RVMAGPISSTDVHKIQRHNMDDMIDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHL 217
Query: 1523 WSSLPTLTFNYACWRSIHG------------FMDSIQRALHLGNSHIHKLSICLDYKPDE 1380
W+ L F++ +R ++ +D + R +H ++ I +L + + +
Sbjct: 218 WTYLS--AFHFETFRRLNESSLQNQKNKANCLLDLVGRLMH-KSTRIERLGVQIFRSSID 274
Query: 1379 CRRLNDCINIAVARHVEDFSLRIFSCK-NLELPHFLFTSPIKAFDLRSERFRPVQLPDTI 1203
+++ I+ A ++ L + N LPH F + +LR + +P I
Sbjct: 275 TDKVSSIISSAANHKLQYLDLSLGDRNDNFVLPH-SFPAFESLNELRLGLQFTLHIPSGI 333
Query: 1202 CSAAHLKTLRLGSAMFPKGDSKRELSLSCPVLENLVINDCEYGHLKVINVCAPMLKNFVI 1023
C LKTL + + F +S ++L CPVL+ L +++C + H+ I++ L+ I
Sbjct: 334 CFPI-LKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTI 392
Query: 1022 SN-----DYHGPRKCSCKITVCTPNLKSIESNGYIYGDIVLENLYSLVSVKMAL------ 876
S DY K+ + NL S+ +++ NL SLV + L
Sbjct: 393 SYLMLCVDYDH----IMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPH 448
Query: 875 HVPPIAKCLTVFLKGLHNATSLKLATWNFENSSSFRALLNQLSV------TFRNLRCLEL 714
P A+C LKGL + SLKL N SF L+ L + TF NL L +
Sbjct: 449 DEPYAAQCSIELLKGLGSVKSLKL---NDIILMSFYHTLDNLHLHLLPLPTFYNLTHLYV 505
Query: 713 GRWCDNSWISVMANLLRSSPFIETLVLREIEA-YCDSMKEEEDRGEDLSSESL--FYHLK 543
+ +++ ++LR +P +E L + + Y DS +DL SL +
Sbjct: 506 CSVSPGNACALVMDILRKTPKLEDLTIPGVVLNYLDS--------DDLILNSLPCCFKSS 557
Query: 542 FVKVDVHYCKGSANELKFLEFLIKNSPILENITITATVQLSRDKER 405
++ G+ +E+KF+ F+++N+P LE I I + LS D E+
Sbjct: 558 LKRLCFLNFHGNVHEIKFVTFILENAPYLEEIKIHCSRHLSADMEK 603
>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 467
Score = 120 bits (300), Expect = 2e-24
Identities = 130/467 (27%), Positives = 207/467 (44%), Gaps = 26/467 (5%)
Frame = -3
Query: 1679 SSNMKKRKKMTTSDATDRISSLPESILLHILSFLEMKEVMRTSLVSRNWRYLWSSLPTLT 1500
SSN K ++ D D IS LPE IL +ILS L +E +RTS+++ WRYLW+ LP
Sbjct: 7 SSNSHKLQRYHMVDMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFD 66
Query: 1499 FNYAC----WRSIHGFMDSIQRALHLGNSHIHKLSICLDYKPDECRRLNDCINIAVARHV 1332
F + +S +D + + LH N I KL I L + +++ ++ A+ V
Sbjct: 67 FRDSSPKRNSKSPDCLVDLVDQLLHKSN-RIKKLFIELPVTIVDAGKVSSMLSSALMHDV 125
Query: 1331 EDFSLRIFSCKNLELPHFLFTSPIKAFDLRSERFRPV------QLPDTICSAAHLKTLRL 1170
D +L NLE + F P RS + +PD IC + LK L
Sbjct: 126 HDLTL------NLESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPS-LKILSF 178
Query: 1169 GSAMFPKGDSKRELSLSCPVLENLVINDCEYGHLKVINVCAPMLKNFVISNDYHGPRKCS 990
F S + L CPVL++L C + ++ I+V P LK I + S
Sbjct: 179 AHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNIN-ISVAIPTLKKLDIFFRSSSLDRNS 237
Query: 989 CKITVCTPNLKSIESNGYIYGDIVLENLYSLVSVKM----------ALHVPPIAKCLTVF 840
C + NL S+ + L N S+V + LHV A + +F
Sbjct: 238 CMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFA--IELF 295
Query: 839 LKGLHNATSLKLATWNFENSSSFRALLNQLSVTFRNLRCLELGRWCDNSWISVMANLLRS 660
+ L + SL+L+ + + ++ L+ L +F+NL LE+ D+ V+A++LR
Sbjct: 296 SR-LGSVESLRLSDQTIQCLNYAKSALHLLP-SFKNLTRLEV--HFDDPSCEVLADILRK 351
Query: 659 SPFIETLVLREIEAYCDSMKEEED----RGEDLSSESL--FYHLKFVKVDVHYCKGSANE 498
SP +E L + + S ED +S+SL + D+ +G E
Sbjct: 352 SPKLEFLHIYGVHLVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAE 411
Query: 497 LKFLEFLIKNSPILENITITATVQLSRDKERKLAIFGKKLHSLPRAS 357
++ ++FL++N +L + I T LS+ K +KLA +L +L S
Sbjct: 412 IRLVKFLLENVTLLREMNIYCTGYLSK-KSKKLADVRNQLQALGMGS 457
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 116 bits (290), Expect = 2e-23
Identities = 136/462 (29%), Positives = 208/462 (45%), Gaps = 19/462 (4%)
Frame = -3
Query: 1664 KRKKMTTSDATDR----ISSLPESILLHILSFLEMKEVMRTSLVSRNWRYLWSSLPTLTF 1497
KRKK+ TD I +LP+++L HILSFL + +RTS++S+ W +LW S LTF
Sbjct: 11 KRKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF 70
Query: 1496 NYACWRSIHGFMDSIQRALHL-GNSHIHKLSICLDYKPDECRRLNDCINIAVARHVEDFS 1320
FMD + R L L G S+I + + + K D+ R+ I+ AV R+V+D
Sbjct: 71 FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVK-DDPSRVGTWISAAVNRNVKDLY 129
Query: 1319 LRIFSCK-NLELPHFLFTSPIKAFDLRSERFRPVQLPDTICSAAHLKTLRLGSAMFPKGD 1143
L + + + LPH LF +L ++LP +I S + LK L L +F
Sbjct: 130 LELRDFEASFVLPHCLFNCETLT-ELEINMPYILKLPSSI-SLSCLKILNLYEVIFTDDH 187
Query: 1142 SKRELSLSCPVLENLVINDCEYGHLKVINVCAPMLKNFVISNDYHGPRKCS------CKI 981
S ++L S P L L I++C + +L +++ AP L+ S D H P + S C +
Sbjct: 188 STQQL-FSLPNLVELEIHECNWMNLVAVSISAPKLQ----SLDIHEPCQSSPASLGGCHV 242
Query: 980 TVCTPNLKSIE-----SNGY-IYGDIVLENLYSLVSVKMALHVPPIAKCLTVFLKGLHNA 819
+ +L SN Y +Y V+E S+ S A A + L+G+ +A
Sbjct: 243 RIFGTHLADFTIIGTLSNDYCLYESSVVETCISIFSA--ADKPRQTAYRASKLLEGISSA 300
Query: 818 TSLKLATWNFENSSSFRALLNQLSVTFRNLRCLELGRWCDNSWISVMANLLRSSPFIETL 639
SL L T N + L + FRNL L N +++ +SP + L
Sbjct: 301 QSLCLTT-NVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIAL 359
Query: 638 VLREIEAYCDSMKEEEDRGEDLSSESLFYHLKFVKVDVHYCKGSANELKFLEFLIKNSPI 459
+ ED D S LKF++V G EL + FL+KN+
Sbjct: 360 QFYGVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVG--RFGGDEKELDAVGFLLKNATA 417
Query: 458 LENITITATVQLSRDK-ERKLAIFGKKLHSLPRASSSFKVNF 336
LE++ I + RD+ K ++L +LPR S +NF
Sbjct: 418 LESMDIIYSGSARRDQGVDKTNEIHQQLLALPRWSEIGNINF 459
>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
Length = 526
Score = 113 bits (283), Expect = 1e-22
Identities = 137/511 (26%), Positives = 221/511 (43%), Gaps = 65/511 (12%)
Frame = -3
Query: 1685 LISSNMKKRKKMTTSDATDRISSLPESILLHILSFLEMKEVMRTSLVSRNWRYLWSSLPT 1506
L S++ ++ +K DRIS LP+ +L+HILSFL M +RT ++S+ + Y W+S P
Sbjct: 17 LASTDGERSRKNPRESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPN 76
Query: 1505 LTFNYACWRSIHGFMDSIQRA--LHLGNSHIHKLSICLDYKPD--ECRRLNDCINI---- 1350
L F+ I F+ + RA LH N + K +I +D E DC+ +
Sbjct: 77 LVFDQDSEWEIDDFITFVNRALLLHBPNCKVQKFTIYMDCMDQVIENSLQEDCVTLWLRF 136
Query: 1349 AVARHVEDFSLRI-------------FSCKNLELPHFLFTSPIKAFDLRSERFRPVQLPD 1209
A + VE +L + LP F+F +F + RF +
Sbjct: 137 ATRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRH--SSFRKLATRFCNF-VTY 193
Query: 1208 TICSAAHLKTLRLGSAMFPKGDSKRELSLSCPVLENLVINDCEYGHLKVINVCAPMLKNF 1029
+ S A LK+L +G A + ++ R + + P LE L + C +G + IN+C+ LK
Sbjct: 194 GVVSWAWLKSLSIGYAELNE-ETIRNILMGSPALECLEFHRC-HGFAR-INICSESLKKL 250
Query: 1028 VI-----SNDYHGPRKCSCKITVCTPNLKSIESNGYIYGDIVLENLYSLVSVKMALHV-- 870
I ND G + V PN++S+E +G L ++ SLV+ K+ + +
Sbjct: 251 SILEPWAPNDAEG----ETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMH 306
Query: 869 ---------PPIAKCLTVFLKGLHNATSLKLATWNFENSSSFRALLNQLSVTFRNLRCLE 717
+ L LK L + +L + TW E S + + R L
Sbjct: 307 QDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVLE--MKSMPSPLSKHRYLI 364
Query: 716 LGRWCDNSWISVMANLLRSSPFIETL--------VLR--EIEAYCDSMKEEEDRG----- 582
L + +A+LL+SSP +E L VL+ E + + + K +D G
Sbjct: 365 LNTLPKKWDLPGIASLLKSSPDLEKLHIDVNPLNVLKFWEXQVFNNYYKYGDDHGESFWE 424
Query: 581 -EDLSSESLFYHLKFVKV---DVHYCKGSANELKFLEFLIKNSPILENITITATVQLSRD 414
E+ S + L +LK +K+ D YC + F+EFL+KN+ +LE + I R
Sbjct: 425 SEEKSFKCLLQNLKIIKIVGFDPGYC-DIQFAIAFIEFLLKNAQVLEKMVINV-----RK 478
Query: 413 KERKLAIFGK---------KLHSLPRASSSF 348
+R+ + + KLH SSSF
Sbjct: 479 VKRQTSYAAQELPSGSKIVKLHKSVSTSSSF 509