BLASTX nr result

ID: Cimicifuga21_contig00009177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009177
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21425.1| putative translation elongation factor P [Oryza s...   190   2e-46
gb|ACG41065.1| elongation factor P [Zea mays]                         185   5e-45
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   185   5e-45
ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [S...   185   7e-45
ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachyp...   184   9e-45

>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  190 bits (483), Expect = 2e-46
 Identities = 87/112 (77%), Positives = 105/112 (93%)
 Frame = +3

Query: 303 AAPWSAIQHRGAKVLGTDVRFGNVIQRKGRIYQVLKSQHTQHGRGGATIQVELRDVDSGN 482
           AAPW+AIQ RGAK+LG++V+ GNVIQR+GRIYQV+K+QH+  GRGGATIQVELRDVD+GN
Sbjct: 51  AAPWAAIQRRGAKMLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDTGN 110

Query: 483 KVTERFRTDEAIEKVFVEEKPFTFLYSDGDNVTIMEPNTFEQMEISKELFGK 638
           K+TERFRTDEA+E+VFVEEK FT+LY +GDNVT+MEP TFEQ+E+SKELFGK
Sbjct: 111 KITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELFGK 162


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  185 bits (470), Expect = 5e-45
 Identities = 87/116 (75%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
 Frame = +3

Query: 294 GTLA-APWSAIQHRGAKVLGTDVRFGNVIQRKGRIYQVLKSQHTQHGRGGATIQVELRDV 470
           G+LA APW+A Q RGAK+LG+DV+ GNVIQR+G IYQV+K+QH+  GRGGATIQVELRDV
Sbjct: 46  GSLATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDV 105

Query: 471 DSGNKVTERFRTDEAIEKVFVEEKPFTFLYSDGDNVTIMEPNTFEQMEISKELFGK 638
           D+GNK+TERFRTDEA+E+VFVEEK FT+LY +GD VT+MEP TFEQ+E+SKELFGK
Sbjct: 106 DTGNKITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGK 161


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  185 bits (470), Expect = 5e-45
 Identities = 87/116 (75%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
 Frame = +3

Query: 294 GTLA-APWSAIQHRGAKVLGTDVRFGNVIQRKGRIYQVLKSQHTQHGRGGATIQVELRDV 470
           G+LA APW+A Q RGAK+LG+DV+ GNVIQR+G IYQV+K+QH+  GRGGATIQVELRDV
Sbjct: 46  GSLATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDV 105

Query: 471 DSGNKVTERFRTDEAIEKVFVEEKPFTFLYSDGDNVTIMEPNTFEQMEISKELFGK 638
           D+GNK+TERFRTDEA+E+VFVEEK FT+LY +GD VT+MEP TFEQ+E+SKELFGK
Sbjct: 106 DTGNKITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGK 161


>ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [Sorghum bicolor]
           gi|241917550|gb|EER90694.1| hypothetical protein
           SORBIDRAFT_01g004430 [Sorghum bicolor]
          Length = 246

 Score =  185 bits (469), Expect = 7e-45
 Identities = 84/112 (75%), Positives = 102/112 (91%)
 Frame = +3

Query: 303 AAPWSAIQHRGAKVLGTDVRFGNVIQRKGRIYQVLKSQHTQHGRGGATIQVELRDVDSGN 482
           AAPW+A Q RG K+LG+DV+ GN+IQR+GRIYQV+K+QH+  GRGGATIQVELRDVD+GN
Sbjct: 50  AAPWAATQRRGVKMLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDTGN 109

Query: 483 KVTERFRTDEAIEKVFVEEKPFTFLYSDGDNVTIMEPNTFEQMEISKELFGK 638
           K+TERFRTDEA+E+VFVEEK FT+LY +GD VT+MEP TFEQ+E+SKELFGK
Sbjct: 110 KLTERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGK 161


>ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachypodium distachyon]
          Length = 248

 Score =  184 bits (468), Expect = 9e-45
 Identities = 84/112 (75%), Positives = 101/112 (90%)
 Frame = +3

Query: 303 AAPWSAIQHRGAKVLGTDVRFGNVIQRKGRIYQVLKSQHTQHGRGGATIQVELRDVDSGN 482
           A PW+A Q RGAK+LG+DV+ GNVIQRKG IYQV+K+QH+  GRGGATIQVELRDVD+GN
Sbjct: 53  ATPWAATQRRGAKMLGSDVKLGNVIQRKGHIYQVIKAQHSHQGRGGATIQVELRDVDTGN 112

Query: 483 KVTERFRTDEAIEKVFVEEKPFTFLYSDGDNVTIMEPNTFEQMEISKELFGK 638
           K+ ERFRTDEA+E+VFVEEK FT+LY +GDNV +MEPNTFEQ+E+SK+LFGK
Sbjct: 113 KIVERFRTDEALERVFVEEKSFTYLYQEGDNVALMEPNTFEQIEVSKDLFGK 164


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