BLASTX nr result

ID: Cimicifuga21_contig00009161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009161
         (1672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267...   454   e-125
emb|CBI28632.3| unnamed protein product [Vitis vinifera]              454   e-125
ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267...   454   e-125
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc...   452   e-124
ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788...   451   e-124

>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
            vinifera]
          Length = 407

 Score =  454 bits (1167), Expect = e-125
 Identities = 218/243 (89%), Positives = 227/243 (93%), Gaps = 3/243 (1%)
 Frame = -2

Query: 1440 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 1261
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIY QVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1260 GPSTAFCLLYKFFTMKLTVNQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1081
            GPSTAFCLLYKFFTMKLTV QMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1080 DDEEFSPGSNGRKTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLERMKLPSTHTG 901
            D+EEFSPGS GR TTMG YVRDLLLGQYYFDTLFPR PVPIMRQIVANLE+MKLPS H G
Sbjct: 121  DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 900  VTGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPIHERNNS 730
            VTGD +RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++RN+S
Sbjct: 181  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 729  DDV 721
            DD+
Sbjct: 241  DDL 243



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 40/58 (68%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
 Frame = -2

Query: 369 SPPRDGSKEKASASSNLAKLRDLYGDAGNSKVDNDVER-IRKDSSSEEVIRLGG-SWK 202
           SP  DGSKEK SAS+NLAKLRDLYGD G+ K  + +ER  R+D+S EEVIRLGG SWK
Sbjct: 350 SPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 407


>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  454 bits (1167), Expect = e-125
 Identities = 218/243 (89%), Positives = 227/243 (93%), Gaps = 3/243 (1%)
 Frame = -2

Query: 1440 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 1261
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIY QVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1260 GPSTAFCLLYKFFTMKLTVNQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1081
            GPSTAFCLLYKFFTMKLTV QMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1080 DDEEFSPGSNGRKTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLERMKLPSTHTG 901
            D+EEFSPGS GR TTMG YVRDLLLGQYYFDTLFPR PVPIMRQIVANLE+MKLPS H G
Sbjct: 121  DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 900  VTGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPIHERNNS 730
            VTGD +RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++RN+S
Sbjct: 181  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 729  DDV 721
            DD+
Sbjct: 241  DDL 243



 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = -2

Query: 357 DGSKEKASASSNLAKLRDLYGDAGNSKVDNDVER-IRKDSSSEEVIRLGG-SWK 202
           +GSKEK SAS+NLAKLRDLYGD G+ K  + +ER  R+D+S EEVIRLGG SWK
Sbjct: 330 NGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 383


>ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267328 isoform 1 [Vitis
            vinifera]
          Length = 433

 Score =  454 bits (1167), Expect = e-125
 Identities = 218/243 (89%), Positives = 227/243 (93%), Gaps = 3/243 (1%)
 Frame = -2

Query: 1440 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 1261
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIY QVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1260 GPSTAFCLLYKFFTMKLTVNQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1081
            GPSTAFCLLYKFFTMKLTV QMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1080 DDEEFSPGSNGRKTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLERMKLPSTHTG 901
            D+EEFSPGS GR TTMG YVRDLLLGQYYFDTLFPR PVPIMRQIVANLE+MKLPS H G
Sbjct: 121  DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 900  VTGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPIHERNNS 730
            VTGD +RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++RN+S
Sbjct: 181  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 729  DDV 721
            DD+
Sbjct: 241  DDL 243



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 40/58 (68%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
 Frame = -2

Query: 369 SPPRDGSKEKASASSNLAKLRDLYGDAGNSKVDNDVER-IRKDSSSEEVIRLGG-SWK 202
           SP  DGSKEK SAS+NLAKLRDLYGD G+ K  + +ER  R+D+S EEVIRLGG SWK
Sbjct: 376 SPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 433


>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
            gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
            [Medicago truncatula]
          Length = 433

 Score =  452 bits (1162), Expect = e-124
 Identities = 210/240 (87%), Positives = 226/240 (94%)
 Frame = -2

Query: 1440 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 1261
            ME+QTSG+PI+SLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIY QVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGRPIESLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 1260 GPSTAFCLLYKFFTMKLTVNQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1081
            GPSTAFCLLYKFFTMKLTV QMHGLLKH DSPYIRAVGFLYLRY ADPKTLW WFEPY K
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYYADPKTLWSWFEPYAK 120

Query: 1080 DDEEFSPGSNGRKTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLERMKLPSTHTG 901
            DDEEFSPGSNGR TTMGVY+RDLLLGQYYFDTLFPR PVP+MRQ+VANLE++KLP+TH G
Sbjct: 121  DDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTTHCG 180

Query: 900  VTGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPIHERNNSDDV 721
             TG+ +RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP+RRT+P  HE+N +DD+
Sbjct: 181  TTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTVPAPHEKNGTDDI 240



 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 43/58 (74%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = -2

Query: 369 SPPRDGSKEKASASSNLAKLRDLYGDAGNSKVDNDVERI-RKDSSSEEVIRLGG-SWK 202
           SP RDGSK K SASSNLAKL+DLYGD G SK D ++ERI R+D+S EEVIRLGG SWK
Sbjct: 376 SPQRDGSK-KTSASSNLAKLKDLYGDLGESKGDANMERIPRRDNSGEEVIRLGGSSWK 432


>ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788237 [Glycine max]
          Length = 428

 Score =  451 bits (1159), Expect = e-124
 Identities = 212/240 (88%), Positives = 227/240 (94%)
 Frame = -2

Query: 1440 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 1261
            ME+QT G+PIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIY QVDHVEPWMTGNCR
Sbjct: 1    MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 1260 GPSTAFCLLYKFFTMKLTVNQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1081
            GPSTAFCLLYKFFTMKLTV QMHGLLKH DSPYIRAVGFLYLRY ADPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAVGFLYLRYCADPKTLWNWFEPYVK 120

Query: 1080 DDEEFSPGSNGRKTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVANLERMKLPSTHTG 901
            DDEEFSPGSNGR TTMGVYVRDLLLGQYYFDTLFPR PVP++RQ+V+NLE++KLP+TH+G
Sbjct: 121  DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG 180

Query: 900  VTGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPIHERNNSDDV 721
             TG+ +RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP+RRTLP  HE+N SDD+
Sbjct: 181  STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS-HEKNGSDDI 239



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
 Frame = -2

Query: 381 ERLPSPPRDGSKEKASASSNLAKLRDLYGDAGNSKVDNDVERI-RKDSSSEEVIRLGGS- 208
           E   SP R+ SK + SASSNLA+L+D+YGD G++K D ++ERI RKDS  EEVIRLGGS 
Sbjct: 367 ESRSSPQREESK-RTSASSNLAQLKDMYGDLGDNKGDANMERIPRKDSGGEEVIRLGGST 425

Query: 207 WK 202
           WK
Sbjct: 426 WK 427