BLASTX nr result

ID: Cimicifuga21_contig00009135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009135
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
emb|CBI15799.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...    99   5e-19
ref|XP_002531806.1| ATP binding protein, putative [Ricinus commu...    99   5e-19
ref|XP_002533344.1| protein with unknown function [Ricinus commu...    96   4e-18

>ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|222867728|gb|EEF04859.1|
           predicted protein [Populus trichocarpa]
          Length = 959

 Score =  100 bits (249), Expect = 1e-19
 Identities = 41/68 (60%), Positives = 56/68 (82%)
 Frame = +1

Query: 145 AQSTDPAEVRALQVIRRSLEDPMKNLRSWDKGDPCLTNWTGIFCFNMTGNDGNLHIRDLH 324
           AQ T+P+EV AL  ++ +L DPMK L +W+KGDPC +NWTG+FC++ TG DG LH+R+L+
Sbjct: 24  AQVTNPSEVNALLAVKNNLIDPMKQLSNWNKGDPCTSNWTGVFCYDATGTDGYLHVRELY 83

Query: 325 LLNMNLSG 348
           LLN+NLSG
Sbjct: 84  LLNLNLSG 91


>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = +1

Query: 145 AQSTDPAEVRALQVIRRSLEDPMKNLRSWDKGDPCLTNWTGIFCFNMTGNDGNLHIRDLH 324
           A  TDP EV AL+ I+ SLEDPM NL +W++GDPC + WTG+ CFN T ND  LH+++L 
Sbjct: 36  ATVTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQ 95

Query: 325 LLNMNLSGT 351
           LLNM+LSGT
Sbjct: 96  LLNMHLSGT 104


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Vitis vinifera]
          Length = 959

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = +1

Query: 145 AQSTDPAEVRALQVIRRSLEDPMKNLRSWDKGDPCLTNWTGIFCFNMTGNDGNLHIRDLH 324
           A  TDP EV AL+ I+ SLEDPM NL +W++GDPC + WTG+ CFN T ND  LH+++L 
Sbjct: 36  ATVTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQ 95

Query: 325 LLNMNLSGT 351
           LLNM+LSGT
Sbjct: 96  LLNMHLSGT 104


>ref|XP_002531806.1| ATP binding protein, putative [Ricinus communis]
           gi|223528540|gb|EEF30563.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 961

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = +1

Query: 145 AQSTDPAEVRALQVIRRSLEDPMKNLRSWDKGDPCLTNWTGIFCFNMTGNDGNLHIRDLH 324
           AQSTDP+EV AL  +++SL DPMKNL +W+KGDPC +NWTG+ C+  +G D  LH+ +L 
Sbjct: 26  AQSTDPSEVNALLAVKKSLIDPMKNLWNWEKGDPCTSNWTGVVCYETSGTDKYLHVGELQ 85

Query: 325 LLNMNLSG 348
           LLNMNLSG
Sbjct: 86  LLNMNLSG 93


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
           gi|223526824|gb|EEF29043.1| protein with unknown
           function [Ricinus communis]
          Length = 844

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = +1

Query: 142 GAQS--TDPAEVRALQVIRRSLEDPMKNLRSWDKGDPCLTNWTGIFCFNMTGNDGNLHIR 315
           GAQ   T P EV+AL+ +++SL D  KNL +W++GDPC +NWTG+ CFN T +DG LH+R
Sbjct: 25  GAQDAITSPIEVKALREVKKSLVDINKNLSNWNRGDPCTSNWTGVLCFNATMDDGYLHVR 84

Query: 316 DLHLLNMNLSGT 351
           +L LLNMNLSGT
Sbjct: 85  ELQLLNMNLSGT 96


Top