BLASTX nr result

ID: Cimicifuga21_contig00009105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009105
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   270   3e-70
emb|CBI27906.3| unnamed protein product [Vitis vinifera]              270   3e-70
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici...   246   3e-63
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin...   246   4e-63
ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2...   239   4e-61

>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis
            vinifera]
          Length = 607

 Score =  270 bits (690), Expect = 3e-70
 Identities = 130/201 (64%), Positives = 157/201 (78%)
 Frame = -1

Query: 817  ILCVGENFYCTLAKGPLVEDHSLIIPIEHSPTVLGVEPEVDMELDRFKNALKMYFKNQGK 638
            I+ +GE++YC LAKGPLVED  L+IP+EHS   L + PE ++ELDRF+ +LKMYF+ QGK
Sbjct: 408  IISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGK 467

Query: 637  EVVFFAWIAKHISHTNIQAIPIPLSKASIVRGFFTLAAEKLGFKFVEINSNKNDSEGRKS 458
            EVVFF WI K  +H NIQA+PIPLS+AS V+  F LAAEKLGF+FV   SN NDSEGRKS
Sbjct: 468  EVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSN-NDSEGRKS 526

Query: 457  LMTLFNKNLGIFYVELPDGIILSHAVENNEDFLVQFGRQVLAGLLNVPDRADWRSCTLSK 278
            L   F+  +  FYVELPDG ILSHA+E+NE F VQFGR+VLAGLLN+ DRADWR+C  SK
Sbjct: 527  LRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSK 586

Query: 277  EDEVKATEAFKKRFENFDPTQ 215
            EDE+K  E FK +F+ FDP Q
Sbjct: 587  EDEMKMAEVFKNQFKKFDPYQ 607


>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  270 bits (690), Expect = 3e-70
 Identities = 130/201 (64%), Positives = 157/201 (78%)
 Frame = -1

Query: 817 ILCVGENFYCTLAKGPLVEDHSLIIPIEHSPTVLGVEPEVDMELDRFKNALKMYFKNQGK 638
           I+ +GE++YC LAKGPLVED  L+IP+EHS   L + PE ++ELDRF+ +LKMYF+ QGK
Sbjct: 394 IISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGK 453

Query: 637 EVVFFAWIAKHISHTNIQAIPIPLSKASIVRGFFTLAAEKLGFKFVEINSNKNDSEGRKS 458
           EVVFF WI K  +H NIQA+PIPLS+AS V+  F LAAEKLGF+FV   SN NDSEGRKS
Sbjct: 454 EVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSN-NDSEGRKS 512

Query: 457 LMTLFNKNLGIFYVELPDGIILSHAVENNEDFLVQFGRQVLAGLLNVPDRADWRSCTLSK 278
           L   F+  +  FYVELPDG ILSHA+E+NE F VQFGR+VLAGLLN+ DRADWR+C  SK
Sbjct: 513 LRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSK 572

Query: 277 EDEVKATEAFKKRFENFDPTQ 215
           EDE+K  E FK +F+ FDP Q
Sbjct: 573 EDEMKMAEVFKNQFKKFDPYQ 593


>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223546571|gb|EEF48069.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 606

 Score =  246 bits (629), Expect = 3e-63
 Identities = 112/201 (55%), Positives = 151/201 (75%)
 Frame = -1

Query: 817  ILCVGENFYCTLAKGPLVEDHSLIIPIEHSPTVLGVEPEVDMELDRFKNALKMYFKNQGK 638
            I+ +GEN+YC LAKGPLV+DH L++PIEHSP  L +  E + EL R + +LK+Y+  QGK
Sbjct: 407  IISIGENYYCALAKGPLVQDHILLVPIEHSPNTLSLPQECESELVRLRKSLKLYYNKQGK 466

Query: 637  EVVFFAWIAKHISHTNIQAIPIPLSKASIVRGFFTLAAEKLGFKFVEINSNKNDSEGRKS 458
            E + F W +K  +H N+QA+P+P S+A+ V+  F +AAEKLGFKFV +  N N+S+GRK 
Sbjct: 467  ETILFEWASKRGTHANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKFN-NNSDGRKW 525

Query: 457  LMTLFNKNLGIFYVELPDGIILSHAVENNEDFLVQFGRQVLAGLLNVPDRADWRSCTLSK 278
            L T F++N   FYVELPDG +LSH+V+ NE F  QFGR+VLAGLLN+P+RADWR+CTLSK
Sbjct: 526  LRTQFDRNYSFFYVELPDGTVLSHSVKENESFPAQFGREVLAGLLNMPERADWRTCTLSK 585

Query: 277  EDEVKATEAFKKRFENFDPTQ 215
            E+E K  +  KK+FE  +P +
Sbjct: 586  EEETKMIDELKKQFEELNPAE 606


>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
            [Cucumis sativus] gi|449489882|ref|XP_004158448.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            64-like [Cucumis sativus]
          Length = 606

 Score =  246 bits (628), Expect = 4e-63
 Identities = 116/201 (57%), Positives = 150/201 (74%)
 Frame = -1

Query: 817  ILCVGENFYCTLAKGPLVEDHSLIIPIEHSPTVLGVEPEVDMELDRFKNALKMYFKNQGK 638
            I+ VGE+FYC LAKGPLV DH L+IP+EH P  L + P+ + E++R +N L+ YFK+QGK
Sbjct: 407  IVSVGESFYCALAKGPLVPDHILVIPVEHFPNTLSLGPDYETEINRLQNCLRKYFKSQGK 466

Query: 637  EVVFFAWIAKHISHTNIQAIPIPLSKASIVRGFFTLAAEKLGFKFVEINSNKNDSEGRKS 458
            EVVFF W++K  +H N+QA+PIP S+A +V+  F +AAEKLGFKFV I+ +   SEGRKS
Sbjct: 467  EVVFFEWVSKRSTHANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFV-ISKSDAPSEGRKS 525

Query: 457  LMTLFNKNLGIFYVELPDGIILSHAVENNEDFLVQFGRQVLAGLLNVPDRADWRSCTLSK 278
            L T F+ +   FY ELP+ + LSH +E NE F  QFGR+VLAGLLN+ D+ADWR+C  SK
Sbjct: 526  LRTQFDSDHSFFYAELPECVTLSHVIEENEIFPAQFGREVLAGLLNMADKADWRNCAHSK 585

Query: 277  EDEVKATEAFKKRFENFDPTQ 215
            E+E K  E FK RFENFDP +
Sbjct: 586  EEETKMAEDFKIRFENFDPNK 606


>ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1|
            predicted protein [Populus trichocarpa]
          Length = 606

 Score =  239 bits (611), Expect = 4e-61
 Identities = 113/204 (55%), Positives = 150/204 (73%), Gaps = 3/204 (1%)
 Frame = -1

Query: 817  ILCVGENFYCTLAKGPLVEDHSLIIPIEHSPTVLGVEPEVDMELDRFKNALKMYFKNQGK 638
            I+ +GE +YC L KGPLV+DH L+IPIEH+P  L +  + + EL +F+N+LK+Y+KN+GK
Sbjct: 403  IISIGEFYYCALPKGPLVQDHVLVIPIEHAPCTLSLTQQSNSELVKFQNSLKLYYKNRGK 462

Query: 637  EVVFFAWIAKHISHTNIQAIPIPLSKASIVRGFFTLAAEKLGFKFVE---INSNKNDSEG 467
            E + F WI+K  SH NIQ +P+P +KA+ V+    LAAEKLGFKFV    I +  N S+G
Sbjct: 463  EAILFEWISKRSSHANIQVVPVPSTKAAAVQDICNLAAEKLGFKFVVMKFILAVNNSSDG 522

Query: 466  RKSLMTLFNKNLGIFYVELPDGIILSHAVENNEDFLVQFGRQVLAGLLNVPDRADWRSCT 287
            R+ L T F++N   FYVEL +G ILSH+VE NE+F  QFGR+VLAGLLN+P+RADWR+C 
Sbjct: 523  REWLRTQFDRNYSFFYVELTEGTILSHSVEENENFPAQFGREVLAGLLNMPERADWRNCA 582

Query: 286  LSKEDEVKATEAFKKRFENFDPTQ 215
            L K++E K  E FKK+FE  DP Q
Sbjct: 583  LGKDEETKMAEEFKKQFEELDPNQ 606


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