BLASTX nr result

ID: Cimicifuga21_contig00009101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009101
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   147   3e-33
ref|XP_002283861.1| PREDICTED: uncharacterized protein LOC100264...   143   4e-32
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]       142   7e-32
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  135   9e-30
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   132   8e-29

>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  147 bits (370), Expect = 3e-33
 Identities = 77/132 (58%), Positives = 94/132 (71%), Gaps = 10/132 (7%)
 Frame = -2

Query: 631 MLKGEMGNLVHSLSCRRWIH-SALPALLDSAFSHR-SETSFVLPEFNQEVENNP-----R 473
           MLK   GN  ++L   RW H +A+P  LD + ++  +    VLPEFN   +N+       
Sbjct: 7   MLKAASGNNGYTLGFLRWTHVAAMPPPLDGSINNAIAPPQMVLPEFNPNHDNSNSSYDNN 66

Query: 472 LE---VPSFSFGGCMELMAVPKKKVSRHKRGIRNGPRALKPIPVIMRCRCCGRVKLPHFF 302
           LE   +PSFSFGG M+LMAVPKKKVSRHKRGIRNGP+ALKP PVI+RCR CGRVKLPHF+
Sbjct: 67  LEFGFLPSFSFGGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFY 126

Query: 301 CCSGDRGTVGER 266
           CCSG+RG  GE+
Sbjct: 127 CCSGERGNAGEQ 138


>ref|XP_002283861.1| PREDICTED: uncharacterized protein LOC100264586 [Vitis vinifera]
          Length = 128

 Score =  143 bits (360), Expect = 4e-32
 Identities = 72/124 (58%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = -2

Query: 634 TMLKGEMGNLVHSLSCRRWI--HSALPALLDSAFSHRSETSFVLPEFNQEVENNPRLEVP 461
           TMLK    NL   L   R +  H+A+ A L       +   FVLPE N E + +P++E+P
Sbjct: 3   TMLKCAADNLRCRLISSRGLSHHAAISAPLGRMMDCTTGLQFVLPESNNESQEDPKIELP 62

Query: 460 SFSFGGCMELMAVPKKKVSRHKRGIRNGPRALKPIPVIMRCRCCGRVKLPHFFCCSGDRG 281
           +  F G MELMAVPK+KVSRHKRGIRNGP+ALKP+PVI+RC+ CGRVKLPHF+CCSGDRG
Sbjct: 63  NPYFSGSMELMAVPKRKVSRHKRGIRNGPKALKPVPVIIRCKSCGRVKLPHFYCCSGDRG 122

Query: 280 TVGE 269
             GE
Sbjct: 123 GSGE 126


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score =  142 bits (358), Expect = 7e-32
 Identities = 74/131 (56%), Positives = 87/131 (66%), Gaps = 9/131 (6%)
 Frame = -2

Query: 631 MLKGEMGNLVHSLSCRRWIHSA-LPALLDSAFSHRSET-SFVLPEF-------NQEVENN 479
           MLK  +G    +LS  RW H A +P+ LD +    +     VLPEF       N    NN
Sbjct: 7   MLKTAVGKYGCTLSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSSYRNN 66

Query: 478 PRLEVPSFSFGGCMELMAVPKKKVSRHKRGIRNGPRALKPIPVIMRCRCCGRVKLPHFFC 299
                PSFSFGG +E+MAVPKKKVS HKRGIRNGP+ALKP PVI+RCR CGR+KLPHF+C
Sbjct: 67  LEFGFPSFSFGGSIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCRSCGRIKLPHFYC 126

Query: 298 CSGDRGTVGER 266
           CSGDRG  GE+
Sbjct: 127 CSGDRGKAGEQ 137


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  135 bits (340), Expect = 9e-30
 Identities = 75/136 (55%), Positives = 87/136 (63%), Gaps = 7/136 (5%)
 Frame = -2

Query: 652 MAFRTTTMLKGEMGNLVHSLSCRRWIHS-ALPALLDSAF-SHRSETSFVLPEF--NQEVE 485
           MA R   +     GN    L  R+W H  A+   LD A  S  +   F LPEF  NQ+  
Sbjct: 1   MALRLGMLKCAAEGNNGCRLGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTS 60

Query: 484 NNPR---LEVPSFSFGGCMELMAVPKKKVSRHKRGIRNGPRALKPIPVIMRCRCCGRVKL 314
            N        P FSFGG MELMAVPK+KV+ HKRGIRNGP+ALKPIPVI+RC+ CG+VKL
Sbjct: 61  KNSSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKL 120

Query: 313 PHFFCCSGDRGTVGER 266
           PHF+CCSGDRG  GER
Sbjct: 121 PHFYCCSGDRGKNGER 136


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  132 bits (332), Expect = 8e-29
 Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 7/117 (5%)
 Frame = -2

Query: 595 LSCRRWIHS-ALPALLDSAF-SHRSETSFVLPEF--NQEVENNPR---LEVPSFSFGGCM 437
           L  R+W H  A+   LD A  S  +   F LPEF  NQ+  NN        P FSFGG M
Sbjct: 20  LGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTSNNSSDFGFTFPGFSFGGSM 79

Query: 436 ELMAVPKKKVSRHKRGIRNGPRALKPIPVIMRCRCCGRVKLPHFFCCSGDRGTVGER 266
           ELMAVPK+KV+ HKRGIRNGP+ALKP PVI+RC+ CG+VKLPHF+CCSGDRG  G+R
Sbjct: 80  ELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVKLPHFYCCSGDRGKNGKR 136


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