BLASTX nr result

ID: Cimicifuga21_contig00009098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009098
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   676   0.0  
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   668   0.0  
ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putativ...   659   0.0  
ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   658   0.0  
ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|2...   646   0.0  

>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
            sativus]
          Length = 449

 Score =  676 bits (1743), Expect = 0.0
 Identities = 338/395 (85%), Positives = 364/395 (92%)
 Frame = +3

Query: 36   MADDGEEVKTFKDLGLSEQLVEACDNMGWKTPTKIQIEAIPHALEGKDLIGLAQTGSGKT 215
            M  D EEVKTF+ LG+ EQLVEACD++GWK P+KIQ EAIPHALEGKDLIGLAQTGSGKT
Sbjct: 1    MEQDNEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKT 60

Query: 216  GAFALPIIHALLESPQAFFACVLSPTRELAIQIADQFEALGSSIGVKSARLIGGTDMMQQ 395
            GAFALPI+ ALLE+PQAFFACVLSPTRELAIQIA+QFEALGS IG+K A L+GG DM+QQ
Sbjct: 61   GAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQ 120

Query: 396  AILLAKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDDILKAI 575
            AI LAKRPH+VV TPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSID+IL  I
Sbjct: 121  AINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEI 180

Query: 576  PRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYCFVPAKYKDCYLV 755
            PRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQQYCF+PAKYK+CYLV
Sbjct: 181  PRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLV 240

Query: 756  FLLTEMSGSTSMVFTRTCEATRILALILRNLGLNAIPISGQMSQGKRLGALNKFKAGECT 935
            ++LTEMSGSTSMVFTRTC+ATR+L+LILRNLGL AIPISGQM+Q KRLGALNKFKAGEC 
Sbjct: 241  YILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECN 300

Query: 936  TLICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWF 1115
             LICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEW+
Sbjct: 301  ILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 360

Query: 1116 IQIEKLIGKKLPEFPAQXXXXXXXXXRVTEAKRIS 1220
            IQIEKLIGKKLP+F AQ         RV EAKRIS
Sbjct: 361  IQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRIS 395


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
            vinifera]
          Length = 470

 Score =  668 bits (1724), Expect = 0.0
 Identities = 334/395 (84%), Positives = 363/395 (91%)
 Frame = +3

Query: 36   MADDGEEVKTFKDLGLSEQLVEACDNMGWKTPTKIQIEAIPHALEGKDLIGLAQTGSGKT 215
            MA+D +EVK+FKDLG+ EQLVEAC+N+GWKTP+KIQ EAIPHALEGKDLIGLAQTGSGKT
Sbjct: 35   MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 94

Query: 216  GAFALPIIHALLESPQAFFACVLSPTRELAIQIADQFEALGSSIGVKSARLIGGTDMMQQ 395
            GAFALPI+ ALL++PQ  FACVLSPTRELAIQIA+QFEALGS IG+K A L+GG D  QQ
Sbjct: 95   GAFALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQ 154

Query: 396  AILLAKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDDILKAI 575
            AI LAKRPHIVV TPGRL+DHLSNTKGFSLRT+KYLVLDEADRLLN+DFEK+ID+IL  I
Sbjct: 155  AIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVI 214

Query: 576  PRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYCFVPAKYKDCYLV 755
            PRER+TYLFSATMTKKVRKLQRACLRNPVKIE ASKYSTVDTLKQQY FVPAKYK+CYLV
Sbjct: 215  PRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSTVDTLKQQYRFVPAKYKECYLV 274

Query: 756  FLLTEMSGSTSMVFTRTCEATRILALILRNLGLNAIPISGQMSQGKRLGALNKFKAGECT 935
            ++LTE+SGST+MVFTRTC+ATR+LAL+LRNLGL AIPISG MSQ KRLGALNKFKAGEC 
Sbjct: 275  YILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKFKAGECN 334

Query: 936  TLICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWF 1115
             LICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEW+
Sbjct: 335  ILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 394

Query: 1116 IQIEKLIGKKLPEFPAQXXXXXXXXXRVTEAKRIS 1220
            IQIEKLIGKKLPEFPAQ         RVTEAKRIS
Sbjct: 395  IQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRIS 429


>ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 442

 Score =  659 bits (1700), Expect = 0.0
 Identities = 333/401 (83%), Positives = 362/401 (90%), Gaps = 4/401 (0%)
 Frame = +3

Query: 36   MADDGEEVKTFKDLGLSEQLVEACDNMGWKTPTKIQIEAIPHALEGKDLIGLAQTGSGKT 215
            M ++ EEVKTFK+LG+ +QLV ACDN+GWK PTKIQIE+IPHALEGKDLIGLAQTGSGKT
Sbjct: 1    MEEEKEEVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHALEGKDLIGLAQTGSGKT 60

Query: 216  GAFALPIIHALLE----SPQAFFACVLSPTRELAIQIADQFEALGSSIGVKSARLIGGTD 383
            GAFALPI+ +LLE    S QAFFACVLSPTRELAIQIA+QFEALGS IGVK A L+GG D
Sbjct: 61   GAFALPILQSLLEASEKSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGGVD 120

Query: 384  MMQQAILLAKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDDI 563
            M+QQ+I L KRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKS+D+I
Sbjct: 121  MVQQSIALGKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSLDEI 180

Query: 564  LKAIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYCFVPAKYKD 743
            LK IPRERRT+LFSATMTKKV+KLQRACLRNPVKIEAASKYSTVDTLKQ+Y F+PAKYKD
Sbjct: 181  LKVIPRERRTFLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQEYRFIPAKYKD 240

Query: 744  CYLVFLLTEMSGSTSMVFTRTCEATRILALILRNLGLNAIPISGQMSQGKRLGALNKFKA 923
            CYLV++LTE SGSTSMVFTRTC+AT  LAL+LRNLGL AIPI+G M+Q KRLGALNKFKA
Sbjct: 241  CYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRLGALNKFKA 300

Query: 924  GECTTLICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYE 1103
            GEC  LICTDVASRGLDIPSVDMVINYDIP NSKDYIHRVGRTARAGRSGVAISLVNQYE
Sbjct: 301  GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYE 360

Query: 1104 LEWFIQIEKLIGKKLPEFPAQXXXXXXXXXRVTEAKRISHT 1226
            +EWFIQIEKLIGKKLPE+PA+          +TEAKRIS T
Sbjct: 361  VEWFIQIEKLIGKKLPEYPAREEEVLLLLEPITEAKRISQT 401


>ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            10-like [Vitis vinifera]
          Length = 436

 Score =  658 bits (1697), Expect = 0.0
 Identities = 330/395 (83%), Positives = 360/395 (91%)
 Frame = +3

Query: 36   MADDGEEVKTFKDLGLSEQLVEACDNMGWKTPTKIQIEAIPHALEGKDLIGLAQTGSGKT 215
            MA+D +EVK+FKDLG+ EQLVEAC+N+GWKTP+KIQ EAIPHALEGKDLIGLAQTGSGKT
Sbjct: 1    MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 60

Query: 216  GAFALPIIHALLESPQAFFACVLSPTRELAIQIADQFEALGSSIGVKSARLIGGTDMMQQ 395
            GAFALPI+ ALL++PQ  FACVLSPTRELAIQIA+QFEALGS IG+K A L+GG D  QQ
Sbjct: 61   GAFALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQ 120

Query: 396  AILLAKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDDILKAI 575
            AI LAKRPHIVV T G L+DHLSNTKGFSLRT+KYLVLDEADRLLN+DFEK+ID+IL  I
Sbjct: 121  AIALAKRPHIVVGTLGXLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVI 180

Query: 576  PRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYCFVPAKYKDCYLV 755
            P+ER+TYLFSATMTKKVRKLQRACLRNPVKIEA SKYSTVDTLKQQY FVPAKYK+CYLV
Sbjct: 181  PQERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSKYSTVDTLKQQYRFVPAKYKECYLV 240

Query: 756  FLLTEMSGSTSMVFTRTCEATRILALILRNLGLNAIPISGQMSQGKRLGALNKFKAGECT 935
            ++LTE+SGST+MVFTRTC+ATR+LAL+LRNLGL AIPISG MSQ KRLGALNKFKAGEC 
Sbjct: 241  YILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECN 300

Query: 936  TLICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWF 1115
             LICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTA AGRSGVAISLVNQYELEW+
Sbjct: 301  ILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWY 360

Query: 1116 IQIEKLIGKKLPEFPAQXXXXXXXXXRVTEAKRIS 1220
            IQIEKLIGKKLPEFPAQ         RVTEAKRIS
Sbjct: 361  IQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRIS 395


>ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|222853576|gb|EEE91123.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  646 bits (1666), Expect = 0.0
 Identities = 322/396 (81%), Positives = 358/396 (90%), Gaps = 4/396 (1%)
 Frame = +3

Query: 51   EEVKTFKDLGLSEQLVEACDNMGWKTPTKIQIEAIPHALEGKDLIGLAQTGSGKTGAFAL 230
            EEVK+FKDLG+ +QLVEACD++GWK PTKIQ+EA+PHALEGKDLIGLAQTGSGKTGAFAL
Sbjct: 23   EEVKSFKDLGICDQLVEACDSLGWKNPTKIQVEAVPHALEGKDLIGLAQTGSGKTGAFAL 82

Query: 231  PIIHALLESPQA----FFACVLSPTRELAIQIADQFEALGSSIGVKSARLIGGTDMMQQA 398
            PI+ ALLES Q     FFACVLSPTRELAIQIA+QFEALGS IG++   L+GG D++QQ 
Sbjct: 83   PILQALLESSQKSVQPFFACVLSPTRELAIQIAEQFEALGSGIGLRCGVLVGGVDIVQQT 142

Query: 399  ILLAKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDDILKAIP 578
            ++LAKRPHIVVATPGRL+DHLSNTKGFSLRTLKYLVLDEADRLLNE+FEKS+D+IL  IP
Sbjct: 143  LILAKRPHIVVATPGRLLDHLSNTKGFSLRTLKYLVLDEADRLLNEEFEKSLDEILNVIP 202

Query: 579  RERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYCFVPAKYKDCYLVF 758
            R+R+TYLFSATMTKKV+KLQRACLRNPVKIEAASKYSTVDTLKQQY FVP+K+KDCYLV+
Sbjct: 203  RDRKTYLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPSKHKDCYLVY 262

Query: 759  LLTEMSGSTSMVFTRTCEATRILALILRNLGLNAIPISGQMSQGKRLGALNKFKAGECTT 938
            +LTEMS ST+MVFTRTC+AT  LAL+LRNLGL AIPI+G MSQ KRLGALNKFKA EC  
Sbjct: 263  ILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPINGHMSQPKRLGALNKFKARECNV 322

Query: 939  LICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWFI 1118
            LICTDVASRGLDIPSVDMVINYD+P+NSKDYIHRVGRTARAGRSGVAISLVNQYELEW++
Sbjct: 323  LICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYL 382

Query: 1119 QIEKLIGKKLPEFPAQXXXXXXXXXRVTEAKRISHT 1226
            QIE LIGKKLPEFPAQ         RV +AKRISHT
Sbjct: 383  QIENLIGKKLPEFPAQEEEVLMLLDRVIDAKRISHT 418


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