BLASTX nr result

ID: Cimicifuga21_contig00009096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009096
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001768948.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_001768946.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_001752524.1| predicted protein [Physcomitrella patens sub...    56   3e-06
ref|XP_001764049.1| predicted protein [Physcomitrella patens sub...    56   4e-06
ref|XP_001773804.1| predicted protein [Physcomitrella patens sub...    55   5e-06

>ref|XP_001768948.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679860|gb|EDQ66302.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 542

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 ALQTLHIVRCDGLMSWPNWLGNLTWLRELDISCSSNLPFLPEQIQHLTRLQLLEIA-TGE 43
           +L TL++  C  L S PN LGNLT L  L++ C S+L  LP ++ +LT L +++I     
Sbjct: 93  SLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSS 152

Query: 42  ETTLPGWMSNFTSL 1
            T+LP  + N TSL
Sbjct: 153 LTSLPNELDNLTSL 166


>ref|XP_001768946.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679858|gb|EDQ66300.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 549

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 ALQTLHIVRCDGLMSWPNWLGNLTWLRELDISCSSNLPFLPEQIQHLTRLQLLEIA-TGE 43
           +L TL++  C  L S PN LGNLT L  L++ C S+L  LP ++ +LT L +++I     
Sbjct: 357 SLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSS 416

Query: 42  ETTLPGWMSNFTSL 1
            T+LP  + N TSL
Sbjct: 417 LTSLPNELDNLTSL 430


>ref|XP_001752524.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162696424|gb|EDQ82763.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 539

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 ALQTLHIVRCDGLMSWPNWLGNLTWLRELDISCSSNLPFLPEQIQHLTRLQLLEIAT-GE 43
           +L TL+I  C  L S PN LGNLT L  L IS  SNL  LP ++ +LT L  L+I+    
Sbjct: 363 SLTTLYITNCSSLTSLPNELGNLTSLTTLYISNCSNLTLLPNELGNLTSLTTLDISNCSS 422

Query: 42  ETTLPGWMSNFTSL 1
             +LP  + N TSL
Sbjct: 423 LISLPNELDNLTSL 436


>ref|XP_001764049.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684788|gb|EDQ71188.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 625

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 ALQTLHIVRCDGLMSWPNWLGNLTWLRELDISCSSNLPFLPEQIQHLTRLQLLEI-ATGE 43
           +L T++I  C  L+S PN LGNLT L  LD+S  S+L  LP ++ +LT L  L++     
Sbjct: 21  SLTTMNISNCSSLISLPNELGNLTSLTTLDVSICSSLTSLPNELGNLTSLITLDMWGCSS 80

Query: 42  ETTLPGWMSNFTSL 1
            T+LP  + N TSL
Sbjct: 81  LTSLPNELGNLTSL 94


>ref|XP_001773804.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674919|gb|EDQ61421.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 336

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -2

Query: 219 ALQTLHIVRCDGLMSWPNWLGNLTWLRELDISCSSNLPFLPEQIQHLTRLQLLEIATGEE 40
           +L TL + RC  L S PN LGNLT L  LD+S  S+L  LP ++ +LT L  L I+   E
Sbjct: 83  SLTTLIMWRCSSLTSLPNELGNLTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNE 142

Query: 39  ----TTLPGWMSNFTSL 1
               T LP  ++N TSL
Sbjct: 143 CSSLTLLPNELANLTSL 159


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