BLASTX nr result

ID: Cimicifuga21_contig00009071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009071
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...    97   8e-29
ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [...    91   3e-28
emb|CBI37215.3| unnamed protein product [Vitis vinifera]               91   3e-28
emb|CAN70732.1| hypothetical protein VITISV_040379 [Vitis vinifera]    91   3e-28
ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|2...    90   7e-28

>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 523

 Score = 97.4 bits (241), Expect(2) = 8e-29
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -3

Query: 398 DLAVTPDGEHLISICSEKDIRIYNFQAKTERVIKEEHPITSLSISRDSKFLNVNLNSQEI 219
           DLAVTPDG HLIS+ S+KDIRI+N     E+VI EEHPITSLS+S DSKF  VNLNSQEI
Sbjct: 358 DLAVTPDGVHLISVFSDKDIRIFNLVTNAEQVISEEHPITSLSVSIDSKFFIVNLNSQEI 417

Query: 218 HLW 210
           HLW
Sbjct: 418 HLW 420



 Score = 54.7 bits (130), Expect(2) = 8e-29
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -1

Query: 121 AGTGNKPLKYLGHKQGKYVIWSCFGEVDCILIASGSENSQ 2
           AG   K L+Y+GHKQ KYVI SCFG ++   IASGSENSQ
Sbjct: 423 AGNWEKALRYMGHKQHKYVIRSCFGGLNSSFIASGSENSQ 462


>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 520

 Score = 91.3 bits (225), Expect(2) = 3e-28
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = -3

Query: 398 DLAVTPDGEHLISICSEKDIRIYNFQAKTERVIKEEHPITSLSISRDSKFLNVNLNSQEI 219
           DLAVTPDGE+LISI SEK+IRI N     E VI E++ ITSLS+SRDSKFL VNLNS+EI
Sbjct: 358 DLAVTPDGENLISIFSEKEIRILNVGTNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEI 417

Query: 218 HLW 210
           H+W
Sbjct: 418 HMW 420



 Score = 58.9 bits (141), Expect(2) = 3e-28
 Identities = 28/39 (71%), Positives = 28/39 (71%)
 Frame = -1

Query: 121 AGTGNKPLKYLGHKQGKYVIWSCFGEVDCILIASGSENS 5
           AG   KPLKY GHKQ KYVI SCFG   C  IASGSENS
Sbjct: 423 AGKWEKPLKYTGHKQNKYVIRSCFGGFHCTFIASGSENS 461


>emb|CBI37215.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 91.3 bits (225), Expect(2) = 3e-28
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = -3

Query: 398 DLAVTPDGEHLISICSEKDIRIYNFQAKTERVIKEEHPITSLSISRDSKFLNVNLNSQEI 219
           DLAVTPDGE+LISI SEK+IRI N     E VI E++ ITSLS+SRDSKFL VNLNS+EI
Sbjct: 298 DLAVTPDGENLISIFSEKEIRILNVGTNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEI 357

Query: 218 HLW 210
           H+W
Sbjct: 358 HMW 360



 Score = 58.9 bits (141), Expect(2) = 3e-28
 Identities = 28/39 (71%), Positives = 28/39 (71%)
 Frame = -1

Query: 121 AGTGNKPLKYLGHKQGKYVIWSCFGEVDCILIASGSENS 5
           AG   KPLKY GHKQ KYVI SCFG   C  IASGSENS
Sbjct: 363 AGKWEKPLKYTGHKQNKYVIRSCFGGFHCTFIASGSENS 401


>emb|CAN70732.1| hypothetical protein VITISV_040379 [Vitis vinifera]
          Length = 362

 Score = 91.3 bits (225), Expect(2) = 3e-28
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = -3

Query: 398 DLAVTPDGEHLISICSEKDIRIYNFQAKTERVIKEEHPITSLSISRDSKFLNVNLNSQEI 219
           DLAVTPDGE+LISI SEK+IRI N     E VI E++ ITSLS+SRDSKFL VNLNS+EI
Sbjct: 222 DLAVTPDGENLISIFSEKEIRILNVGTNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEI 281

Query: 218 HLW 210
           H+W
Sbjct: 282 HMW 284



 Score = 58.9 bits (141), Expect(2) = 3e-28
 Identities = 28/39 (71%), Positives = 28/39 (71%)
 Frame = -1

Query: 121 AGTGNKPLKYLGHKQGKYVIWSCFGEVDCILIASGSENS 5
           AG   KPLKY GHKQ KYVI SCFG   C  IASGSENS
Sbjct: 287 AGKWEKPLKYTGHKQNKYVIRSCFGGFHCTFIASGSENS 325


>ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|222862074|gb|EEE99616.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 90.1 bits (222), Expect(2) = 7e-28
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = -3

Query: 398 DLAVTPDGEHLISICSEKDIRIYNFQAKTERVIKEEHPITSLSISRDSKFLNVNLNSQEI 219
           DLAVTPDGE+LIS+ S+ +IRI N +   E+VI EE PITSLS+S DSKF  VNLNSQEI
Sbjct: 97  DLAVTPDGENLISVMSDLEIRILNVRTNAEQVIPEEQPITSLSVSADSKFFIVNLNSQEI 156

Query: 218 HLW 210
           HLW
Sbjct: 157 HLW 159



 Score = 58.9 bits (141), Expect(2) = 7e-28
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 AGTGNKPLKYLGHKQGKYVIWSCFGEVDCILIASGSENSQ 2
           AG   KPLKY+GH+Q KYVI SCFG +D   IASGSENSQ
Sbjct: 162 AGKWKKPLKYIGHQQHKYVIRSCFGGLDSSFIASGSENSQ 201


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