BLASTX nr result

ID: Cimicifuga21_contig00009051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009051
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD56622.1| predicted protein [Gossypium raimondii]                 60   1e-07
ref|XP_002522262.1| DNA binding protein, putative [Ricinus commu...    59   4e-07
ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002331701.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002285516.1| PREDICTED: ubiquitin domain-containing prote...    57   2e-06

>gb|ACD56622.1| predicted protein [Gossypium raimondii]
          Length = 114

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = +2

Query: 224 MGCAGSSQTKGDENAKKIRKPKPWKHSQPI 313
           MGC GS +T+GDEN KKIRKPKPWKHS+PI
Sbjct: 1   MGCTGSKRTRGDENVKKIRKPKPWKHSEPI 30


>ref|XP_002522262.1| DNA binding protein, putative [Ricinus communis]
           gi|223538515|gb|EEF40120.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 219

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/30 (76%), Positives = 29/30 (96%)
 Frame = +2

Query: 224 MGCAGSSQTKGDENAKKIRKPKPWKHSQPI 313
           MGC+GSS+ KGD+++KKIRKPKPWKHS+PI
Sbjct: 1   MGCSGSSRAKGDDHSKKIRKPKPWKHSEPI 30


>ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/30 (83%), Positives = 25/30 (83%)
 Frame = +2

Query: 224 MGCAGSSQTKGDENAKKIRKPKPWKHSQPI 313
           MGCAGSSQ K D N KKIRKPKPWKH QPI
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPI 30


>ref|XP_002331701.1| predicted protein [Populus trichocarpa] gi|222874307|gb|EEF11438.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +2

Query: 224 MGCAGSSQTKGDENAKKIRKPKPWKHSQPI 313
           MGCAGSSQ K D +AKKIRKPKPWKH QPI
Sbjct: 1   MGCAGSSQAKADGSAKKIRKPKPWKHPQPI 30


>ref|XP_002285516.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera]
           gi|147767244|emb|CAN66729.1| hypothetical protein
           VITISV_025684 [Vitis vinifera]
           gi|302142875|emb|CBI20170.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +2

Query: 224 MGCAGSSQTKGDENAKKIRKPKPWKHSQPI 313
           MGCAGSSQTKGD   KKIRKPKPWK+ QP+
Sbjct: 1   MGCAGSSQTKGDGTVKKIRKPKPWKNPQPL 30


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