BLASTX nr result

ID: Cimicifuga21_contig00009039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009039
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520493.1| Transcription elongation factor B polypeptid...   178   9e-43
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   176   3e-42
ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin...   176   6e-42
ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycin...   173   3e-41

>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  178 bits (452), Expect = 9e-43
 Identities = 88/98 (89%), Positives = 92/98 (93%)
 Frame = +1

Query: 154 MKKEETVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGSFSETQHGVVKFPEISTPILEK 333
           M+KE+TVKLISAEGFEFVIDK AAMVSQTIRNMLTSPGSF+ETQHG V FPEIST ILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60

Query: 334 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 447
           ICQYFYWSLQ+A GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYAKGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  176 bits (447), Expect = 3e-42
 Identities = 87/98 (88%), Positives = 92/98 (93%)
 Frame = +1

Query: 154 MKKEETVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGSFSETQHGVVKFPEISTPILEK 333
           M+KE+TVKLISAEGFEFVIDK AAMVSQTIRNMLTSPGSF+E +HG V FPEIST ILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60

Query: 334 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 447
           ICQYFYWSLQFASGK+TEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLHT 98


>ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max]
           gi|255626357|gb|ACU13523.1| unknown [Glycine max]
          Length = 98

 Score =  176 bits (445), Expect = 6e-42
 Identities = 87/98 (88%), Positives = 90/98 (91%)
 Frame = +1

Query: 154 MKKEETVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGSFSETQHGVVKFPEISTPILEK 333
           MKKE+TVKLISAEGFEFV+DK AAMVSQTI NMLTSPGSF+E QHG V FPEIST ILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 334 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 447
           ICQYFYW LQFASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWHLQFASGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  175 bits (443), Expect = 1e-41
 Identities = 86/98 (87%), Positives = 92/98 (93%)
 Frame = +1

Query: 154 MKKEETVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGSFSETQHGVVKFPEISTPILEK 333
           M+KE+TVKLISAEGFEFVI K AAMVSQTIRNMLTSPGSF+ET+HG V FPEIST ILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60

Query: 334 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 447
           ICQYFYWSLQ+A+GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYANGKETEFPIEPELTLELMMAANYLHT 98


>ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycine max]
           gi|255629123|gb|ACU14906.1| unknown [Glycine max]
          Length = 98

 Score =  173 bits (439), Expect = 3e-41
 Identities = 85/98 (86%), Positives = 90/98 (91%)
 Frame = +1

Query: 154 MKKEETVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGSFSETQHGVVKFPEISTPILEK 333
           MKKE+TVKLIS+EGFEFV+DK AA+VSQTI NMLTSPGSF+E QHG V FPEIST ILEK
Sbjct: 1   MKKEDTVKLISSEGFEFVVDKEAAIVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 334 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 447
           ICQYFYW LQFASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWHLQFASGKETEFSIEPELTLELMMAANYLHT 98


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