BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009021
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1...   308   1e-81
sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig ...   306   4e-81
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   305   7e-81
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   304   2e-80
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   303   5e-80

>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
           unknown [Populus trichocarpa]
           gi|222851421|gb|EEE88968.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  308 bits (788), Expect = 1e-81
 Identities = 144/192 (75%), Positives = 170/192 (88%)
 Frame = +1

Query: 4   PSVGASSSRVFVGYSIYKGKAALTIEPKAPEFASLDSGAYKVSKEGIVLLQFAPAVGTRQ 183
           P VG S  +VFVG+SIYKGKAALT+EP++PEF+ LDSGAYK+ KEG VLLQFAPA   RQ
Sbjct: 74  PPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAASVRQ 133

Query: 184 YDWSRKQVFSLSVAEIGTLMGLGAKGSCEFFHDPNKGKSEEGKVRKVLKAEPLPDGTGYF 363
           YDW+RKQVFSLSV EIG L+ L AKGSCEFFHDPNKGKS+EGKVRK+LK EPLPDG+G+F
Sbjct: 134 YDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHF 193

Query: 364 FNLSVQNKLLNVDESIYIPISKAEFTVMVSAFNYILPFLLGWHAFADSIKPEESVRFNNA 543
           FNLSVQNK+LN+DE+IYIP++KAE+TV+ SAFNYILP+LLGWHA+A+SIKP++S R NNA
Sbjct: 194 FNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNA 253

Query: 544 NSRSGADVEWSR 579
           + R G D EWSR
Sbjct: 254 SPRYGGDYEWSR 265


>sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  306 bits (784), Expect = 4e-81
 Identities = 139/193 (72%), Positives = 174/193 (90%)
 Frame = +1

Query: 1   QPSVGASSSRVFVGYSIYKGKAALTIEPKAPEFASLDSGAYKVSKEGIVLLQFAPAVGTR 180
           Q   GAS+ +VFVGYSIYKGKAALT+EP++PEF+ LDSGA+K+S+EG+V+LQFAPA G R
Sbjct: 82  QQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVR 141

Query: 181 QYDWSRKQVFSLSVAEIGTLMGLGAKGSCEFFHDPNKGKSEEGKVRKVLKAEPLPDGTGY 360
           QYDWSRKQVFSLSV EIG+++ LGAK SCEFFHDPNKG+S+EG+VRKVLK EPLPDG+G+
Sbjct: 142 QYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGH 201

Query: 361 FFNLSVQNKLLNVDESIYIPISKAEFTVMVSAFNYILPFLLGWHAFADSIKPEESVRFNN 540
           FFNLSVQNKL+N+DE+IYIP++KAEF V+VSAFN+++P+LLGWH   +S KPE++ R NN
Sbjct: 202 FFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNN 261

Query: 541 ANSRSGADVEWSR 579
           AN RSGA++EW+R
Sbjct: 262 ANPRSGAELEWNR 274


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  305 bits (782), Expect = 7e-81
 Identities = 142/188 (75%), Positives = 168/188 (89%)
 Frame = +1

Query: 16  ASSSRVFVGYSIYKGKAALTIEPKAPEFASLDSGAYKVSKEGIVLLQFAPAVGTRQYDWS 195
           A+  RV+VG+SIYKGKAALT+EP+APEFA+LDSGA+KV++EG VLLQFAPA G RQYDWS
Sbjct: 84  AAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWS 143

Query: 196 RKQVFSLSVAEIGTLMGLGAKGSCEFFHDPNKGKSEEGKVRKVLKAEPLPDGTGYFFNLS 375
           RKQVFSLSV EIGT++ LGA+ SCEFFHDPNKGKS+EGK+RKVLK EPLPDG+G+FFNLS
Sbjct: 144 RKQVFSLSVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLS 203

Query: 376 VQNKLLNVDESIYIPISKAEFTVMVSAFNYILPFLLGWHAFADSIKPEESVRFNNANSRS 555
           VQNK +N+DESIYIP++KAEF V++SAFNYILP+LLGWH FA+SIKP+ +   NNAN R 
Sbjct: 204 VQNKPMNMDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRF 263

Query: 556 GADVEWSR 579
           G D EWSR
Sbjct: 264 GGDYEWSR 271


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
           gi|296086421|emb|CBI32010.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  304 bits (779), Expect = 2e-80
 Identities = 145/189 (76%), Positives = 169/189 (89%)
 Frame = +1

Query: 13  GASSSRVFVGYSIYKGKAALTIEPKAPEFASLDSGAYKVSKEGIVLLQFAPAVGTRQYDW 192
           GA   RVFVG+SIYKGKAALT+EPKAPEF  LDSGA+KVSKEG VLLQFAPA G RQYDW
Sbjct: 81  GALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKVSKEGFVLLQFAPAAGVRQYDW 140

Query: 193 SRKQVFSLSVAEIGTLMGLGAKGSCEFFHDPNKGKSEEGKVRKVLKAEPLPDGTGYFFNL 372
            RKQVFSLSV EIG+L+ LGA+ SCEFFHDP KG+SEEGKVRKVLK EPLPDG+G+FFNL
Sbjct: 141 GRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNL 200

Query: 373 SVQNKLLNVDESIYIPISKAEFTVMVSAFNYILPFLLGWHAFADSIKPEESVRFNNANSR 552
           SVQNKLLN+DE+IYIP+++AEF V++SAFN+I+P+LLGWHA+A+SIKP+++ R NNAN R
Sbjct: 201 SVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDDTSRVNNANPR 260

Query: 553 SGADVEWSR 579
           SG D EWSR
Sbjct: 261 SG-DFEWSR 268


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
           gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
           Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
           Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
           Structure Of The Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  303 bits (775), Expect = 5e-80
 Identities = 137/192 (71%), Positives = 172/192 (89%)
 Frame = +1

Query: 1   QPSVGASSSRVFVGYSIYKGKAALTIEPKAPEFASLDSGAYKVSKEGIVLLQFAPAVGTR 180
           Q   GAS+ +VFVGYSIYKGKAALT+EP++PEF+ LDSGA+K+S+EG+V+LQFAPA G R
Sbjct: 28  QQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVR 87

Query: 181 QYDWSRKQVFSLSVAEIGTLMGLGAKGSCEFFHDPNKGKSEEGKVRKVLKAEPLPDGTGY 360
           QYDWSRKQVFSLSV EIG+++ LG K SCEFFHDPNKG+S+EG+VRKVLK EPLPDG+G+
Sbjct: 88  QYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGH 147

Query: 361 FFNLSVQNKLLNVDESIYIPISKAEFTVMVSAFNYILPFLLGWHAFADSIKPEESVRFNN 540
           FFNLSVQNKL+N+DE+IYIP++KAEF V+VSAFN+++P+LLGWH   +S KPE++ R NN
Sbjct: 148 FFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNN 207

Query: 541 ANSRSGADVEWS 576
           AN RSGA++EW+
Sbjct: 208 ANPRSGAELEWN 219