BLASTX nr result

ID: Cimicifuga21_contig00008979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008979
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC33847.1| putative CuZn-superoxide dismutase [Populus trem...   283   5e-74
gb|AFK41577.1| unknown [Lotus japonicus]                              281   2e-73
ref|XP_002319157.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73
ref|XP_002325843.1| predicted protein [Populus trichocarpa] gi|2...   279   6e-73
emb|CAC33846.2| putative CuZn-superoxide dismutase [Populus trem...   278   1e-72

>emb|CAC33847.1| putative CuZn-superoxide dismutase [Populus tremula x Populus
           tremuloides]
          Length = 158

 Score =  283 bits (723), Expect = 5e-74
 Identities = 132/156 (84%), Positives = 144/156 (92%)
 Frame = +2

Query: 53  TSSIKAVVIINGDNNVRGSLQFIQHPNGITHVKGKVTGLSPGLHGFHIHALGDTTNGCNS 232
           T S+KAV +I GD+NVRGSL FIQ PNG THV G++TGLSPGLHGFHIHALGDTTNGCNS
Sbjct: 3   TGSVKAVALITGDSNVRGSLHFIQEPNGATHVTGRITGLSPGLHGFHIHALGDTTNGCNS 62

Query: 233 TGPHFNPLKRTHGAPSDHERHAGDLGNIIAGPDGIAEVSILDMQIPLSGLHSILGRAVVV 412
           TGPHFNPLK+ HGAPSD+ERHAGDLGNI AG DG+AEVSI D+QIPLSG+HSILGRAVVV
Sbjct: 63  TGPHFNPLKKDHGAPSDNERHAGDLGNITAGSDGVAEVSIKDLQIPLSGMHSILGRAVVV 122

Query: 413 HADPDDLGGGGHELSKTTGNAGARIGCGIIGLQSSV 520
           HADPDDLG GGHELSKTTGNAGAR+GCGIIGL+SSV
Sbjct: 123 HADPDDLGKGGHELSKTTGNAGARVGCGIIGLKSSV 158


>gb|AFK41577.1| unknown [Lotus japonicus]
          Length = 160

 Score =  281 bits (719), Expect = 2e-73
 Identities = 127/158 (80%), Positives = 145/158 (91%)
 Frame = +2

Query: 47  ATTSSIKAVVIINGDNNVRGSLQFIQHPNGITHVKGKVTGLSPGLHGFHIHALGDTTNGC 226
           +T  ++K V +INGDN++RGS+QF+QHP+GITHV G++TGL+PGLHGFHIHALGDTTNGC
Sbjct: 3   STKGTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGC 62

Query: 227 NSTGPHFNPLKRTHGAPSDHERHAGDLGNIIAGPDGIAEVSILDMQIPLSGLHSILGRAV 406
           NSTGPHFNPLK+ HGAPSD ERHAGDLGNI  G DG+AE+SI D+ IPLSG+HSILGRAV
Sbjct: 63  NSTGPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAV 122

Query: 407 VVHADPDDLGGGGHELSKTTGNAGARIGCGIIGLQSSV 520
           VVHADPDDLG GGHELSKTTGNAGAR+GCGIIGLQSSV
Sbjct: 123 VVHADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 160


>ref|XP_002319157.1| predicted protein [Populus trichocarpa] gi|222857533|gb|EEE95080.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  280 bits (716), Expect = 3e-73
 Identities = 131/156 (83%), Positives = 143/156 (91%)
 Frame = +2

Query: 53  TSSIKAVVIINGDNNVRGSLQFIQHPNGITHVKGKVTGLSPGLHGFHIHALGDTTNGCNS 232
           T S+KAV +I GD+ VRGSL FIQ PNG THV G++TGLSPGLHGFHIHALGDTTNGCNS
Sbjct: 3   TGSVKAVALITGDSIVRGSLHFIQEPNGATHVTGRITGLSPGLHGFHIHALGDTTNGCNS 62

Query: 233 TGPHFNPLKRTHGAPSDHERHAGDLGNIIAGPDGIAEVSILDMQIPLSGLHSILGRAVVV 412
           TGPHFNPLK+ HGAPSD ERHAGDLGNIIAG DG+AEVSI D+QIPLSG+HSILGRAVVV
Sbjct: 63  TGPHFNPLKKDHGAPSDKERHAGDLGNIIAGSDGVAEVSIKDLQIPLSGMHSILGRAVVV 122

Query: 413 HADPDDLGGGGHELSKTTGNAGARIGCGIIGLQSSV 520
           HADPDDLG GGHELSKTTGNAGAR+GCGI+GL+SSV
Sbjct: 123 HADPDDLGKGGHELSKTTGNAGARVGCGIVGLKSSV 158


>ref|XP_002325843.1| predicted protein [Populus trichocarpa] gi|222862718|gb|EEF00225.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  279 bits (714), Expect = 6e-73
 Identities = 130/156 (83%), Positives = 142/156 (91%)
 Frame = +2

Query: 53  TSSIKAVVIINGDNNVRGSLQFIQHPNGITHVKGKVTGLSPGLHGFHIHALGDTTNGCNS 232
           T S+KAV +I GD+NVRGSL FIQ PNG THV G++ GLSPGLHGFHIHALGDTTNGCNS
Sbjct: 3   TGSVKAVALITGDSNVRGSLHFIQEPNGATHVTGRIAGLSPGLHGFHIHALGDTTNGCNS 62

Query: 233 TGPHFNPLKRTHGAPSDHERHAGDLGNIIAGPDGIAEVSILDMQIPLSGLHSILGRAVVV 412
           TGPHFNPLK+ HGAP D+ERHAGDLGNIIAG DG+AEVSI D QIPLSG+HSILGRAVVV
Sbjct: 63  TGPHFNPLKKDHGAPCDNERHAGDLGNIIAGSDGVAEVSITDFQIPLSGMHSILGRAVVV 122

Query: 413 HADPDDLGGGGHELSKTTGNAGARIGCGIIGLQSSV 520
           HADPDDLG GGH+LSKTTGNAGAR+GCGIIGL+SSV
Sbjct: 123 HADPDDLGKGGHDLSKTTGNAGARVGCGIIGLKSSV 158


>emb|CAC33846.2| putative CuZn-superoxide dismutase [Populus tremula x Populus
           tremuloides]
          Length = 158

 Score =  278 bits (712), Expect = 1e-72
 Identities = 130/156 (83%), Positives = 143/156 (91%)
 Frame = +2

Query: 53  TSSIKAVVIINGDNNVRGSLQFIQHPNGITHVKGKVTGLSPGLHGFHIHALGDTTNGCNS 232
           T S+KAV +I GD+NVRGSL FIQ P+G THV G++ GLSPGLHGFHIHALGDTTNGCNS
Sbjct: 3   TGSVKAVALITGDSNVRGSLHFIQEPSGATHVTGRIIGLSPGLHGFHIHALGDTTNGCNS 62

Query: 233 TGPHFNPLKRTHGAPSDHERHAGDLGNIIAGPDGIAEVSILDMQIPLSGLHSILGRAVVV 412
           TGPHFNPLK+ HGAPSD+ERHAGDLGNI AG DG+AEVSI D+QIPLSG+HSILGRAVVV
Sbjct: 63  TGPHFNPLKKDHGAPSDNERHAGDLGNITAGSDGVAEVSIKDLQIPLSGMHSILGRAVVV 122

Query: 413 HADPDDLGGGGHELSKTTGNAGARIGCGIIGLQSSV 520
           HADPDDLG GGHELSKTTGNAGAR+GCGIIGL+SSV
Sbjct: 123 HADPDDLGKGGHELSKTTGNAGARVGCGIIGLKSSV 158


Top