BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008871
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868919.1| hypothetical protein ARALYDRAFT_912437 [Arab...    64   1e-07
ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-07
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...    62   3e-07
ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis t...    60   1e-06
ref|XP_002888726.1| hypothetical protein ARALYDRAFT_894748 [Arab...    60   1e-06

>ref|XP_002868919.1| hypothetical protein ARALYDRAFT_912437 [Arabidopsis lyrata subsp.
           lyrata] gi|297314755|gb|EFH45178.1| hypothetical protein
           ARALYDRAFT_912437 [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
 Frame = +3

Query: 159 YICIQNPDNISYSWFSITTHSGGISIEQIHEISSTYPPNLQDLMSYAFAILQQSM----- 323
           Y+C+  P + +  WF +  H GG +++    ++++    L+ + S+     + S      
Sbjct: 77  YVCLSIPPDPTPRWFIL--HRGGPTLDDAAAVNNSVNQRLRPIPSHPCQPPESSSFVELD 134

Query: 324 --IFFIGGEIRDSDREFSNKVFAFDINSRIWVENIKSMKASRAFHTAVAVRNKIYVF-GC 494
             I+ IGG I  S    +++V  FD  S  W   ++SM+ +RA   A  V  KIYVF GC
Sbjct: 135 YGIYIIGGIINGSP---TSEVLRFDCLSHTW-RRVRSMRVARASAAANVVDGKIYVFGGC 190

Query: 495 SSVRKNLTPEQWGECYDHHTNTWVYLPKP---PQEVYDVSDISSHAVCESR 638
             V  +     W E +D  T TW  LP P   P+   + S I    V E +
Sbjct: 191 EEVDSS----NWAEVFDPKTQTWDTLPLPDDDPEIRKNTSMIDKSVVMEGK 237


>ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|222852932|gb|EEE90479.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 3/295 (1%)
 Frame = +3

Query: 156  IYICIQNPDNISYSWFSITTHSGGISIEQIHEISSTYPPNLQDLMSYAFAILQQSMIFFI 335
            +Y+ ++ P   S  WF++         +Q         P    L+  AFA +    I+ I
Sbjct: 71   LYLSLRIPTTTSLQWFTLYP-------DQTKNSLIPLTPAPSPLVGSAFAAVGPK-IYVI 122

Query: 336  GGEIRDSDREFSNKVFAFDINSRIWVENIKSMKASRAFHTAVAVRNKIYVFGCSSVRKNL 515
            GG I D     S  V+A D  S  W E + SM+ SR F  A  V  +IYV G   V    
Sbjct: 123  GGSINDIP---SPHVWALDCRSHTW-EAVPSMRISREFAAAGVVDGRIYVIGGCVVDTWA 178

Query: 516  TPEQWGECYDHHTNTWVYLPKPPQEVYDVSDISSHAVCESRTLILLWVFSLGVYLFDFSL 695
                W E +D  T  W  +     ++     +   AV   R  ++         +++   
Sbjct: 179  KSRNWAEVFDPKTERWDSVDSGKDDLLREKWMHGSAVVNERIYVMA---DRNGVVYEPKT 235

Query: 696  NVWLSSIHTPISQGPRWSNRVAVVKDVIF-WHYFGTIYAYDLFKGLTLELYTFDDAHEKF 872
              W  S+ + +  G  W  R  VV  +++ + Y G I  +D+  G   EL   +    +F
Sbjct: 236  KRW-ESVESELDLG--WRGRACVVNGILYCYDYVGNIRGFDVRNGAWKELRGVEKELPRF 292

Query: 873  GQRLAPDPDGYPGPTFLVHLGAESLCLVW--LDFFHQDKLHCSMFRVEREGDGSL 1031
                        G T + ++G + L +VW       + ++ C+   VE  G+G L
Sbjct: 293  ----------LCGAT-MANVGGK-LVVVWERKGNVKEMEVWCAEIEVEENGEGEL 335


>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
           gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
           SKIP6 [Medicago truncatula]
          Length = 356

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 3/228 (1%)
 Frame = +3

Query: 198 WFSITTHSGGISIEQIHEISSTYP--PNLQDLMSYAFAILQQSMIFFIGGEIRDSDREFS 371
           + S+ T S  +    +H      P  P     +  A+A++    I+ IGG + D     S
Sbjct: 64  YLSLRTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHK-IYLIGGSVNDVP---S 119

Query: 372 NKVFAFDINSRIWVENIKSMKASRAFHTAVAVRNKIYVFGCSSVRKNLTPEQWGECYDHH 551
             V+  D     W+    SM+ +R F  A  +  KIYV G            W E +D  
Sbjct: 120 RHVWILDCRFHRWLPG-PSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPV 178

Query: 552 TNTWVYLPKPPQEVYDVSDISSHAVCESRTLILLWVFSLGVYLFDFSLNVWLSSIHTPIS 731
            N W  +P PP+       + + AV + +   +      G   FD     W  S+   + 
Sbjct: 179 NNRWESVPSPPE--IREKWMHASAVVDGKVYAMA---DRGGVSFDPYNGAW-ESVGRELD 232

Query: 732 QGPRWSNRVAVVKDVIF-WHYFGTIYAYDLFKGLTLELYTFDDAHEKF 872
            G  W  R  VV  +++ + Y G I  +D+ KGL  EL   D +  +F
Sbjct: 233 IG--WRGRATVVDGILYCYDYLGKIKGFDVKKGLWKELKGLDKSLPRF 278


>ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis thaliana]
           gi|75206206|sp|Q9SJ04.1|SKIP6_ARATH RecName:
           Full=F-box/kelch-repeat protein SKIP6; AltName:
           Full=SKP1-interacting partner 6
           gi|4417287|gb|AAD20412.1| SKP1 interacting partner 6
           (SKIP6), putative [Arabidopsis thaliana]
           gi|20268766|gb|AAM14086.1| putative SKP1 interacting
           partner 6 (SKIP6) [Arabidopsis thaliana]
           gi|21689879|gb|AAM67500.1| putative SKP1 interacting
           partner 6 (SKIP6) [Arabidopsis thaliana]
           gi|330252151|gb|AEC07245.1| F-box/kelch-repeat protein
           SKIP6 [Arabidopsis thaliana]
          Length = 372

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
 Frame = +3

Query: 156 IYICIQNPDNISYSWFSIT--THSGGISIEQIHEISSTYPPNLQDLMSYAFAILQQSMIF 329
           +Y+ I+ P      WF++   T S   + + +  I S   P+L   +  A+ ++  S I+
Sbjct: 74  LYVAIRIPPESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSL---VGSAYVVVD-SEIY 129

Query: 330 FIGGEIRDSDREFSNKVFAFDINSRIWVENIKSMKASRAFHTAVAVRNKIYVFGCSSVRK 509
            IGG IRD     S+ V+  D     W   + +M+  R F  A  +  KIYV G   V  
Sbjct: 130 VIGGSIRDVP---SSSVWVLDCRFHTW-RRVSNMRVGREFAAAGVIDGKIYVIGGCVVDN 185

Query: 510 NLTPEQWGECYDHHTNTWVYLPKPPQEVYDVSDISSHAVCESRTLILLWVFSLGVYLFDF 689
                 W E +D  T TW  +  P  EV +   + + AV E +   +         +++ 
Sbjct: 186 WARSINWAEMFDIKTQTWEPVASPGMEVRE-KWMHASAVMEGKVYAMA---DRNGVVYEP 241

Query: 690 SLNVWLSSIHTPISQGPRWSNRVAVVKDVIF-WHYFGTIYAYD 815
               W       +  G  W  R  V++++++ + Y G I  YD
Sbjct: 242 KEKKW-EMPEKRLDLG--WRGRACVIENILYCYDYLGKIRGYD 281


>ref|XP_002888726.1| hypothetical protein ARALYDRAFT_894748 [Arabidopsis lyrata subsp.
            lyrata] gi|297334567|gb|EFH64985.1| hypothetical protein
            ARALYDRAFT_894748 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
 Frame = +3

Query: 324  IFFIGGEIRDSDREFSNKVFAFDINSRIWVENIKSMKASRAFHTAVAVRNKIYVFGCSSV 503
            I+ IGG   +   + S+ V A D  S  W E   SM  +R FH+  A   KIYV G +  
Sbjct: 94   IYSIGGLEHNMSSKASSNVMAMDCRSHTWCE-APSMHVAREFHSVCAFDGKIYVTGAN-- 150

Query: 504  RKNLTPEQWGECYDHHTNTWVYLPKPPQEVYDVSDISSHAVCESRTLILLWVFSLGVYLF 683
             +NL    W   +D +T TW YL  P +E           +C +  L  +W +   +Y+ 
Sbjct: 151  -ENLDSTNWMGVFDTNTRTWEYLQIPGKE-----------LCRASQLESVW-YEGTLYVR 197

Query: 684  DFSLNV--------WLSSIHTPISQGPRWSNRVAVVKDVIFWHYFG-TIYAYDLFKGLTL 836
                NV        W   +   ++ G   S+   V+++V F+H FG TIY +D  K    
Sbjct: 198  SEKKNVTYKLHKGRW-RKVDYAMNYGWGRSSSYCVIENV-FYHNFGTTIYWFDSQKRSWK 255

Query: 837  ELYTFDDAHEKFGQRLAPDPDGYPGPTFLVHLGAESLCLVWLD-----FFHQDKLHCSMF 1001
             L   +   +    + A          +LV  G + + ++W D     F  +  + C+  
Sbjct: 256  ILKGLESLCKSLCNKSA---------KYLVDYGGK-IAVLWQDYVSLKFPRETSIWCAEI 305

Query: 1002 RVEREGDGSL 1031
             +E+  +G +
Sbjct: 306  AIEKRENGEI 315