BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008590
         (3219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi...   775   0.0  
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]   774   0.0  
ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|2...   739   0.0  
ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containi...   733   0.0  
ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   724   0.0  

>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
            mitochondrial-like [Vitis vinifera]
          Length = 679

 Score =  775 bits (2001), Expect = 0.0
 Identities = 372/496 (75%), Positives = 431/496 (86%), Gaps = 8/496 (1%)
 Frame = -3

Query: 3217 DGDGDGSGVFE--------NPKEVERVCKVIDELFASDRNMEAVLDQCGIDLSHDLVVDV 3062
            DGD +  G F+        +P+EV RVC+VIDELFA DRNMEAVLD+C +DLSH LVV V
Sbjct: 182  DGDENVGGDFDEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGV 241

Query: 3061 LSRFRHAHKPAFRFFCWAGKNPGFEHDSTTYNTMMGILGKTRQFESMVAAMEEMGKKGFL 2882
            L RF+HA KPAFRFFCWAG+  GF H+S TYN MM +LG+TRQFESM+  + EMG+KG L
Sbjct: 242  LERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL 301

Query: 2881 MIETFSIAIRSFAAAREMKKAVGIFELMKKHNYKAEVDTFNYLLDALGRAKLGKEAQILF 2702
             +ETFSIAI++FAAA+E KKAVG+FELMK++N+ A VDT N LLD LGRAKLGKEAQ LF
Sbjct: 302  TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALF 361

Query: 2701 DKLKERFPPDLKTYSVLLAGWCKLKNLIEAGRVWNEMIDKGLKPDIVAHNTMLEGLLTGR 2522
            +KL++RF P+L+TY+VLL GWC++KNL+EAGR WNEMIDKG KPDI+AH+TMLEGLL  +
Sbjct: 362  EKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCK 421

Query: 2521 RESEAIKLFELMKAKGPSPNVRSYTILIRDLCKRNKMEEAVGYFDEMLNVGSEPDPAVYT 2342
            ++S+AIKLFE+MKAKGPSPNVR+YTILIRDLCK+ KM+EAV YFDEM++ G +PD AVYT
Sbjct: 422  KKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYT 481

Query: 2341 CLMVGFGNQKKMDKVYGLLKEMKEKGCAPDGRTYNALIKLMTNRQMPDDAVRIYKKMIQN 2162
            CL+ GFGNQKKMDKVY LLKEMKEKGC  DGRTYNALIKLMTNRQMPDDAVRIYKKMIQN
Sbjct: 482  CLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQN 541

Query: 2161 GHKPTIHTYNMMMKSYFQAKNYEMGYAVWEEMASKGCCPDDNSYIVYVGGLIRHGRSEEA 1982
            G + T+HTYNMMMKSYF  +NYEMG AVWEEM  KGCCPDDNSYIV++GGLIRHGRSEEA
Sbjct: 542  GIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEA 601

Query: 1981 CKYLEEMIDKGMKAPQLDYNKFAADFSKVGKPNILEELAQKMKFLGKFEVSNVFARWSEM 1802
            C+YLEEMI+KGMKAPQLDYNKFAADFS+ GKP+ILEELA+KMKF GKFEVSNVFARW+EM
Sbjct: 602  CRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEM 661

Query: 1801 MKKRVKQRDPAHIGRR 1754
            MKKRVK+RDP    R+
Sbjct: 662  MKKRVKRRDPVKSDRQ 677


>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score =  774 bits (1998), Expect = 0.0
 Identities = 367/477 (76%), Positives = 425/477 (89%)
 Frame = -3

Query: 3184 NPKEVERVCKVIDELFASDRNMEAVLDQCGIDLSHDLVVDVLSRFRHAHKPAFRFFCWAG 3005
            +P+EV RVC+VIDELFA DRNMEAVLD+C +DLSH LVV VL RF+HA KPAFRFFCWAG
Sbjct: 201  DPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAG 260

Query: 3004 KNPGFEHDSTTYNTMMGILGKTRQFESMVAAMEEMGKKGFLMIETFSIAIRSFAAAREMK 2825
            +  GF H+S TYN MM +LG+TRQFESM+  + EMG+KG L +ETFSIAI++FAAA+E K
Sbjct: 261  QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERK 320

Query: 2824 KAVGIFELMKKHNYKAEVDTFNYLLDALGRAKLGKEAQILFDKLKERFPPDLKTYSVLLA 2645
            KAVG+FELMK++N+ A VDT N LLD LGRAKLGKEAQ LF+KL++RF P+L+TY+VLL 
Sbjct: 321  KAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLN 380

Query: 2644 GWCKLKNLIEAGRVWNEMIDKGLKPDIVAHNTMLEGLLTGRRESEAIKLFELMKAKGPSP 2465
            GWC++KNL+EAGR WNEMIDKG KPDI+AH+TMLEGLL  +++S+AIKLFE+MKAKGPSP
Sbjct: 381  GWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSP 440

Query: 2464 NVRSYTILIRDLCKRNKMEEAVGYFDEMLNVGSEPDPAVYTCLMVGFGNQKKMDKVYGLL 2285
            NVR+YTILIRDLCK+ KM+EAV YFDEM++ G +PD AVYTCL+ GFGNQKKMDKVY LL
Sbjct: 441  NVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALL 500

Query: 2284 KEMKEKGCAPDGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFQA 2105
            KEMKEKGC  DGRTYNALIKLMTNRQMPDDAVRIYKKMIQNG +PT+HTYNMMMKSYF  
Sbjct: 501  KEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYT 560

Query: 2104 KNYEMGYAVWEEMASKGCCPDDNSYIVYVGGLIRHGRSEEACKYLEEMIDKGMKAPQLDY 1925
            +NYEMG AVW+EM  KGCCPDDNSYIV++GGLIRHGRSEEAC+YLEEMI+KGMKAPQLDY
Sbjct: 561  RNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDY 620

Query: 1924 NKFAADFSKVGKPNILEELAQKMKFLGKFEVSNVFARWSEMMKKRVKQRDPAHIGRR 1754
            NKFAADFS+ GKP+ILEELA+KMKF GKFEVSNVFARW+EMMKKRVK+RDP    R+
Sbjct: 621  NKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRDPVKSDRQ 677


>ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|222861078|gb|EEE98620.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score =  739 bits (1909), Expect = 0.0
 Identities = 350/469 (74%), Positives = 413/469 (88%)
 Frame = -3

Query: 3184 NPKEVERVCKVIDELFASDRNMEAVLDQCGIDLSHDLVVDVLSRFRHAHKPAFRFFCWAG 3005
            +P EV +VCKVIDELFA D NMEAVLD+CGI+LSHDLV++VL RFRHA KPAFRFFCWA 
Sbjct: 72   DPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWAA 131

Query: 3004 KNPGFEHDSTTYNTMMGILGKTRQFESMVAAMEEMGKKGFLMIETFSIAIRSFAAAREMK 2825
            + PGF HDS TY++MM IL K RQFE+M++ +EEMG+K  L ++TFSIA+R+FAAA+E K
Sbjct: 132  EKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIAMRAFAAAKERK 191

Query: 2824 KAVGIFELMKKHNYKAEVDTFNYLLDALGRAKLGKEAQILFDKLKERFPPDLKTYSVLLA 2645
            KAVGIFELMK H Y+  V+T N LLD+LGRAKLGKEAQ LF KL+ RF P+L+TY+VLL 
Sbjct: 192  KAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLN 251

Query: 2644 GWCKLKNLIEAGRVWNEMIDKGLKPDIVAHNTMLEGLLTGRRESEAIKLFELMKAKGPSP 2465
            GWC++KNL+EAGR+WNEM+D+G KPDIV HN MLEGLL  ++ S+AIK FE+MKAKGPSP
Sbjct: 252  GWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSP 311

Query: 2464 NVRSYTILIRDLCKRNKMEEAVGYFDEMLNVGSEPDPAVYTCLMVGFGNQKKMDKVYGLL 2285
            +VRSYTILIRDLCK+ KM+EAVGYF EM++ G  PD AVYTCLM G+GN K+MD VY LL
Sbjct: 312  DVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELL 371

Query: 2284 KEMKEKGCAPDGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFQA 2105
            KEMKEKGC PDG+TYNALIKLMT+++MPDDAVRIYKKMIQNG +P+IH+YNM+MKSYF+ 
Sbjct: 372  KEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRI 431

Query: 2104 KNYEMGYAVWEEMASKGCCPDDNSYIVYVGGLIRHGRSEEACKYLEEMIDKGMKAPQLDY 1925
            +NYEMG+AVW+EM+ KG CPDDNSY V++GGLI  GRSEEACKYLEEMI+KGMKAPQLDY
Sbjct: 432  RNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDY 491

Query: 1924 NKFAADFSKVGKPNILEELAQKMKFLGKFEVSNVFARWSEMMKKRVKQR 1778
            NKFAADFS+ GKP+ILEELAQKMKF GKFEVSNVFARW+EMMKKRVK+R
Sbjct: 492  NKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRR 540


>ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
            mitochondrial-like [Glycine max]
          Length = 648

 Score =  733 bits (1892), Expect = 0.0
 Identities = 350/495 (70%), Positives = 415/495 (83%), Gaps = 8/495 (1%)
 Frame = -3

Query: 3214 GDGD----GSGVF----ENPKEVERVCKVIDELFASDRNMEAVLDQCGIDLSHDLVVDVL 3059
            GDGD    G GV      +P EVERVCKVIDELFA DRNME VLD+CG+ LSHDLVVDVL
Sbjct: 152  GDGDKGYDGRGVSGESCADPVEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVL 211

Query: 3058 SRFRHAHKPAFRFFCWAGKNPGFEHDSTTYNTMMGILGKTRQFESMVAAMEEMGKKGFLM 2879
             RF+HA KPAFRFFCWAGK PGF HDS TYN MM +LG+TRQFE+MVA +EEMG+KG L 
Sbjct: 212  QRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLLT 271

Query: 2878 IETFSIAIRSFAAAREMKKAVGIFELMKKHNYKAEVDTFNYLLDALGRAKLGKEAQILFD 2699
            +ETFSIAI++FA A++ KKAVGIF+LMKK+ +K  VD  N+LLD+L  AKLGKEAQ +F+
Sbjct: 272  METFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFE 331

Query: 2698 KLKERFPPDLKTYSVLLAGWCKLKNLIEAGRVWNEMIDKGLKPDIVAHNTMLEGLLTGRR 2519
            KLK+RF P L+TY++LL+GWC+LKNL+EAGRVWNEMID+G  PD+VAHN MLEGLL  ++
Sbjct: 332  KLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKK 391

Query: 2518 ESEAIKLFELMKAKGPSPNVRSYTILIRDLCKRNKMEEAVGYFDEMLNVGSEPDPAVYTC 2339
            +S+AIKLFE+MKAKGPSPNVRSYTI+I+D CK+  M EA+ YFD M++ G +PD A+YTC
Sbjct: 392  KSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTC 451

Query: 2338 LMVGFGNQKKMDKVYGLLKEMKEKGCAPDGRTYNALIKLMTNRQMPDDAVRIYKKMIQNG 2159
            L+ GFG QKKMD VY LLKEM+E+GC PDGRTYNALIKLMT++ MPDDAVRIYKKMIQ+G
Sbjct: 452  LITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSG 511

Query: 2158 HKPTIHTYNMMMKSYFQAKNYEMGYAVWEEMASKGCCPDDNSYIVYVGGLIRHGRSEEAC 1979
             KPTIHTYNM+MKSYF  KNYEMG+ +W+EM  KGCCPDDNSYIVY+GGLIR  RS EAC
Sbjct: 512  IKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEAC 571

Query: 1978 KYLEEMIDKGMKAPQLDYNKFAADFSKVGKPNILEELAQKMKFLGKFEVSNVFARWSEMM 1799
            KYLEEM++KGMKAP+LDYNKFA+D SK G   ILEELA+KM F+GKFEVSNV A W++MM
Sbjct: 572  KYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMNFVGKFEVSNVLASWADMM 631

Query: 1798 KKRVKQRDPAHIGRR 1754
            KK  K+R+P    R+
Sbjct: 632  KKSAKRREPTTSARQ 646


>ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g62470, mitochondrial-like [Glycine max]
          Length = 510

 Score =  724 bits (1868), Expect = 0.0
 Identities = 348/496 (70%), Positives = 413/496 (83%), Gaps = 8/496 (1%)
 Frame = -3

Query: 3217 DGDGD----GSGVF----ENPKEVERVCKVIDELFASDRNMEAVLDQCGIDLSHDLVVDV 3062
            DGDGD    G GV      +P EVERVCKVIDELFA DRNME VLD+CG+ LSHDLVVDV
Sbjct: 13   DGDGDKGYDGRGVSGESCADPVEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDV 72

Query: 3061 LSRFRHAHKPAFRFFCWAGKNPGFEHDSTTYNTMMGILGKTRQFESMVAAMEEMGKKGFL 2882
            L RF+HA KPAFRFFC AGK PGF HDS TYN MM +LG+TRQFE+MVA +EEMG+KG L
Sbjct: 73   LQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLL 132

Query: 2881 MIETFSIAIRSFAAAREMKKAVGIFELMKKHNYKAEVDTFNYLLDALGRAKLGKEAQILF 2702
             +ETFSIAI++FA A++ KK VGIF+LMKK+ +K  VD  N+LLD+L  AKLGKEAQ +F
Sbjct: 133  TMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVF 192

Query: 2701 DKLKERFPPDLKTYSVLLAGWCKLKNLIEAGRVWNEMIDKGLKPDIVAHNTMLEGLLTGR 2522
            +KLK+RF P L+TY++LL+GWC+LKNL+EAGRVWNEMID+G  PDIVAHN MLEGLL  +
Sbjct: 193  EKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCK 252

Query: 2521 RESEAIKLFELMKAKGPSPNVRSYTILIRDLCKRNKMEEAVGYFDEMLNVGSEPDPAVYT 2342
            ++S+AIKLFE+MKAKGPSPNVRSYTI+I+D CK+  M EA+ YFD M++ G +PD A+YT
Sbjct: 253  KKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYT 312

Query: 2341 CLMVGFGNQKKMDKVYGLLKEMKEKGCAPDGRTYNALIKLMTNRQMPDDAVRIYKKMIQN 2162
            CL+ GFG QKKMD VY LLKEM+E+GC PDGRTYNALIKLMT++ MPDDAVRIYKKMIQ+
Sbjct: 313  CLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQS 372

Query: 2161 GHKPTIHTYNMMMKSYFQAKNYEMGYAVWEEMASKGCCPDDNSYIVYVGGLIRHGRSEEA 1982
            G KPTIHTYNM+MKSYF  KNYEMG+ +W+EM  KGCCPDDNSYIVY+GGLIR  RS EA
Sbjct: 373  GIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEA 432

Query: 1981 CKYLEEMIDKGMKAPQLDYNKFAADFSKVGKPNILEELAQKMKFLGKFEVSNVFARWSEM 1802
            CKYLEEM++KGMKA +LDYNKFA+D SK G   ILEELA+KM F+GKFEVSNV A W++M
Sbjct: 433  CKYLEEMLEKGMKALKLDYNKFASDISKTGNAVILEELARKMNFVGKFEVSNVLASWADM 492

Query: 1801 MKKRVKQRDPAHIGRR 1754
            MKK  K+++P    R+
Sbjct: 493  MKKSAKRKEPTTSARQ 508