BLASTX nr result

ID: Cimicifuga21_contig00008571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008571
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320530.1| predicted protein [Populus trichocarpa] gi|2...   521   e-145
ref|XP_002267469.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   508   e-141
ref|XP_002532210.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   497   e-138
ref|XP_004144553.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   496   e-138
ref|XP_003542190.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   494   e-137

>ref|XP_002320530.1| predicted protein [Populus trichocarpa] gi|222861303|gb|EEE98845.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  521 bits (1341), Expect = e-145
 Identities = 256/307 (83%), Positives = 278/307 (90%)
 Frame = -2

Query: 1305 IRERAIERVTDVAGTYNDLRQRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 1126
            IRERAIER+T+V GTYNDLR RIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG
Sbjct: 196  IRERAIERITNVTGTYNDLRLRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 255

Query: 1125 RVALIPWADMLNHSCEVETFLDYDKSSRGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 946
            RVAL+PWADMLNHS EVETFLDYDKSS+G+VFTTDRPYQPGEQVFISYG+KSNGELLLSY
Sbjct: 256  RVALVPWADMLNHSSEVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSY 315

Query: 945  GFVPKEGTNPSDSVELSLSLEKSDKCYKEKSEALRKHGLSVSQRFPMQISGWPFELMAYA 766
            GFVP+EGTNPSDSVELSLSL+KSDKCYKEK EAL+KHGLSVSQ FP+Q++GWP ELMAYA
Sbjct: 316  GFVPREGTNPSDSVELSLSLKKSDKCYKEKLEALKKHGLSVSQCFPLQVTGWPLELMAYA 375

Query: 765  YLAVSPPDMREKFEEMXXXXXXXXXXXKDMTYPKIEEQALQFILDSCETSISKYTKFLQG 586
            YLAVSPP M  +FEEM           K +TYP IEEQALQFILDSCE SISKYTKFLQ 
Sbjct: 376  YLAVSPPSMSRQFEEMAAAASNKTTTNKKITYPDIEEQALQFILDSCELSISKYTKFLQA 435

Query: 585  SESMDLDVTSPKQINRKLFLKQLSVDLCTSERRILFRTQYILRRRLRDMRSGELKALTIW 406
            S SMDLDVTSPKQ+NR+LFLKQL+VDLC+SERRILFR QY+LRRRLRD+RSGEL+ L I+
Sbjct: 436  SGSMDLDVTSPKQLNRRLFLKQLAVDLCSSERRILFRAQYVLRRRLRDIRSGELRGLKIF 495

Query: 405  NGFRKLF 385
            NGFR LF
Sbjct: 496  NGFRNLF 502


>ref|XP_002267469.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplastic [Vitis
            vinifera] gi|296085051|emb|CBI28466.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  508 bits (1308), Expect = e-141
 Identities = 248/307 (80%), Positives = 276/307 (89%)
 Frame = -2

Query: 1305 IRERAIERVTDVAGTYNDLRQRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 1126
            IRERAIER+ DV GTYNDLR RIFSK+PHLFPEEVFNMETFKWSFGILFSRLVRLPSMD 
Sbjct: 190  IRERAIERINDVTGTYNDLRLRIFSKHPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDE 249

Query: 1125 RVALIPWADMLNHSCEVETFLDYDKSSRGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 946
            ++AL+PWADMLNHSCEVETFLDYDKSS+G+VFTTDR YQP EQVFISYGKKSNGELLLSY
Sbjct: 250  KIALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRTYQPSEQVFISYGKKSNGELLLSY 309

Query: 945  GFVPKEGTNPSDSVELSLSLEKSDKCYKEKSEALRKHGLSVSQRFPMQISGWPFELMAYA 766
            GFVP+EGTNP+D VEL LSL+KSDKCYKEKSEA++KHGLS SQ FP+QI+GWP ELMAYA
Sbjct: 310  GFVPREGTNPNDKVELLLSLKKSDKCYKEKSEAMKKHGLSTSQCFPIQITGWPLELMAYA 369

Query: 765  YLAVSPPDMREKFEEMXXXXXXXXXXXKDMTYPKIEEQALQFILDSCETSISKYTKFLQG 586
            YL VSPP M + FEE+           KD+ YP++EEQALQFILDSCE SISKY+KFLQ 
Sbjct: 370  YLVVSPPSMSQHFEEIAAVASNKTTSKKDIRYPELEEQALQFILDSCEASISKYSKFLQE 429

Query: 585  SESMDLDVTSPKQINRKLFLKQLSVDLCTSERRILFRTQYILRRRLRDMRSGELKALTIW 406
            S SMDLDVTSPKQ+NR++FLKQL+VDLCTSERRILFRTQYILRRRLRD+RSGEL+AL I+
Sbjct: 430  SGSMDLDVTSPKQLNRRVFLKQLAVDLCTSERRILFRTQYILRRRLRDIRSGELRALRIF 489

Query: 405  NGFRKLF 385
            +GFRKLF
Sbjct: 490  DGFRKLF 496


>ref|XP_002532210.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
            N-methyltransferase, chloroplast precursor, putative
            [Ricinus communis] gi|223528106|gb|EEF30179.1|
            Ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 508

 Score =  497 bits (1279), Expect = e-138
 Identities = 244/307 (79%), Positives = 274/307 (89%)
 Frame = -2

Query: 1305 IRERAIERVTDVAGTYNDLRQRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 1126
            IRERAIER+T+V GTYNDLR RIFSKYP LFPEEVFN+ETFKWSFGILFSRLVRLPSMDG
Sbjct: 201  IRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNLETFKWSFGILFSRLVRLPSMDG 260

Query: 1125 RVALIPWADMLNHSCEVETFLDYDKSSRGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 946
            +VAL+PWADMLNHSCEVETFLDYDKSS+G+VFTTDR Y+PGEQVFISYGKKSNGELLLSY
Sbjct: 261  KVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYEPGEQVFISYGKKSNGELLLSY 320

Query: 945  GFVPKEGTNPSDSVELSLSLEKSDKCYKEKSEALRKHGLSVSQRFPMQISGWPFELMAYA 766
            GFVP+EGTNPSDSVELSLSL+KSDK YKEK EAL+KHG S SQ FP++++GWP EL+AYA
Sbjct: 321  GFVPREGTNPSDSVELSLSLKKSDKSYKEKLEALKKHGFSASQCFPVRVTGWPVELLAYA 380

Query: 765  YLAVSPPDMREKFEEMXXXXXXXXXXXKDMTYPKIEEQALQFILDSCETSISKYTKFLQG 586
            YLAVSPP M  KFEE+           KD+ +P+IEEQALQFILDSCE+SISKYTKFLQ 
Sbjct: 381  YLAVSPPSMSSKFEELAAAASNKTTIKKDVGFPEIEEQALQFILDSCESSISKYTKFLQA 440

Query: 585  SESMDLDVTSPKQINRKLFLKQLSVDLCTSERRILFRTQYILRRRLRDMRSGELKALTIW 406
            S SMDLDVTSPKQ+NR+LFLKQL+VDLC SE+RILFR Q +LRRRLRD+RSGEL+AL I+
Sbjct: 441  SGSMDLDVTSPKQLNRRLFLKQLAVDLCNSEQRILFRAQNVLRRRLRDIRSGELRALKIF 500

Query: 405  NGFRKLF 385
            +GFR  F
Sbjct: 501  DGFRNWF 507


>ref|XP_004144553.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplastic-like [Cucumis
            sativus] gi|449511789|ref|XP_004164054.1| PREDICTED: LOW
            QUALITY PROTEIN: ribulose-1,5 bisphosphate
            carboxylase/oxygenase large subunit N-methyltransferase,
            chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  496 bits (1277), Expect = e-138
 Identities = 241/307 (78%), Positives = 273/307 (88%)
 Frame = -2

Query: 1305 IRERAIERVTDVAGTYNDLRQRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 1126
            IRERAIER+T+V GTYNDL  R+FSK+P LFPEEVFN+ETFKWSFGILFSRLVRLPSMDG
Sbjct: 190  IRERAIERITNVVGTYNDLSIRVFSKHPELFPEEVFNIETFKWSFGILFSRLVRLPSMDG 249

Query: 1125 RVALIPWADMLNHSCEVETFLDYDKSSRGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 946
            +VAL+PWADMLNH+CEVETFLDYDK+S+G+VFTTDR YQPGEQVFISYGKKSNGELLLSY
Sbjct: 250  KVALVPWADMLNHNCEVETFLDYDKASQGVVFTTDRAYQPGEQVFISYGKKSNGELLLSY 309

Query: 945  GFVPKEGTNPSDSVELSLSLEKSDKCYKEKSEALRKHGLSVSQRFPMQISGWPFELMAYA 766
            GFVPKEG+NPSDSVEL LSL+KSDKCYKEK EAL+KHGL  SQ FP+Q++GWP EL A+A
Sbjct: 310  GFVPKEGSNPSDSVELLLSLKKSDKCYKEKLEALKKHGLRASQCFPIQVTGWPLELKAFA 369

Query: 765  YLAVSPPDMREKFEEMXXXXXXXXXXXKDMTYPKIEEQALQFILDSCETSISKYTKFLQG 586
            YLAVSPP +  +F+EM           KD+ YP IEE+ALQFILDSCETSISKY KFLQ 
Sbjct: 370  YLAVSPPSLSNQFDEMAAAASNKSTAKKDLNYPDIEEEALQFILDSCETSISKYNKFLQA 429

Query: 585  SESMDLDVTSPKQINRKLFLKQLSVDLCTSERRILFRTQYILRRRLRDMRSGELKALTIW 406
            S SMDLDVTSPKQ+NR++FLKQL+VDLCTSERRILFR+QYILRRRLRD+RSGEL+AL ++
Sbjct: 430  SGSMDLDVTSPKQLNRRVFLKQLAVDLCTSERRILFRSQYILRRRLRDLRSGELRALKLF 489

Query: 405  NGFRKLF 385
             GF KLF
Sbjct: 490  RGFGKLF 496


>ref|XP_003542190.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplastic-like [Glycine
            max]
          Length = 499

 Score =  494 bits (1272), Expect = e-137
 Identities = 245/307 (79%), Positives = 270/307 (87%)
 Frame = -2

Query: 1305 IRERAIERVTDVAGTYNDLRQRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDG 1126
            IRERAIER+ +V GTYNDLR RIFSKYP LFP+EVFN+E+FKWSFGILFSRLVRLPSM G
Sbjct: 192  IRERAIERINNVIGTYNDLRLRIFSKYPDLFPDEVFNIESFKWSFGILFSRLVRLPSMGG 251

Query: 1125 RVALIPWADMLNHSCEVETFLDYDKSSRGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 946
             VAL+PWADMLNHSC+VETFLDYDK+S+GIVFTTDRPYQPGEQVFISYGKKSNGELLLSY
Sbjct: 252  NVALVPWADMLNHSCDVETFLDYDKTSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSY 311

Query: 945  GFVPKEGTNPSDSVELSLSLEKSDKCYKEKSEALRKHGLSVSQRFPMQISGWPFELMAYA 766
            GFVPKEG NPSDSVELSLSL+KSD  YKEK E L+ +GLS SQ FP+QI+GWP ELMAYA
Sbjct: 312  GFVPKEGANPSDSVELSLSLKKSDASYKEKLELLKNYGLSASQCFPIQITGWPLELMAYA 371

Query: 765  YLAVSPPDMREKFEEMXXXXXXXXXXXKDMTYPKIEEQALQFILDSCETSISKYTKFLQG 586
            YLAVSP  MR  FEEM           KD+ YP+IEEQALQFILDSCE+SISKY KFLQ 
Sbjct: 372  YLAVSPSSMRGDFEEMAAAASNNTTSKKDLRYPEIEEQALQFILDSCESSISKYNKFLQA 431

Query: 585  SESMDLDVTSPKQINRKLFLKQLSVDLCTSERRILFRTQYILRRRLRDMRSGELKALTIW 406
            S S+DLDVTSPKQ+NR+LFLKQL+VDLCTSERRILFR QYILRR+LRDMR+GEL+AL I+
Sbjct: 432  SGSLDLDVTSPKQLNRRLFLKQLAVDLCTSERRILFRAQYILRRKLRDMRAGELRALKIF 491

Query: 405  NGFRKLF 385
            NGFR LF
Sbjct: 492  NGFRNLF 498


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