BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008503
         (1724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   367   5e-99
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         350   7e-94
ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|1...   349   1e-93
ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...   347   4e-93
gb|AEV41133.1| D1-type cyclin [Populus x canadensis]                  345   2e-92

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  367 bits (942), Expect = 5e-99
 Identities = 194/302 (64%), Positives = 226/302 (74%), Gaps = 8/302 (2%)
 Frame = +1

Query: 76  MSYSDCFSDLICDEDAGIFADE--ESPEDFEYPVDIEESMAGFVQVEG------DYISRF 231
           +SYSD FSDL+C ED+ I + +  E   D E P DIEES+AGF++ E       DY++RF
Sbjct: 3   LSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVPGFDYLARF 62

Query: 232 HSQSLDVSARQESVAWILKVQAFYHFHPLTAYLSVNYLDRFLASRGLPEANGWPLQLLSI 411
            S SLD SAR+ESVAWILKVQA++ F PLTAYLSVNYLDRFL SR LP+ NGWPLQLLS+
Sbjct: 63  RSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNGWPLQLLSV 122

Query: 412 ACLSLAAKMEEPLVPSLLDLQVEGPKYIFEPRTICRMELLVLTTLDWRLRSITPFTFIDF 591
           ACLSLAAKMEEPLVPSLLDLQVEG K+IFE +TI RMELLVL  LDWRLRSITPF+FI F
Sbjct: 123 ACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGF 182

Query: 592 FASKVDSTGTCIGLLISRATEIILTTIQEIDFLDYSPSSVAVASILHAANEVPNLSLFSP 771
           FA K+DS+G+ IG LISRAT+IIL+ IQE  FL+Y PS +A A+IL AANE+P LSL  P
Sbjct: 183 FAYKLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLSLVDP 242

Query: 772 GNAAAWCQGLSKXXXXXXXXXXXXXXXDSIISCYQLMQEVVVGQKQRKPPKVLPQHRVMT 951
             A +WC GLSK               + IISCYQLMQE+ V   +RKPPK+LPQ RV  
Sbjct: 243 ERAESWCDGLSK---------------EKIISCYQLMQEITVDNNRRKPPKLLPQLRVTI 287

Query: 952 HA 957
            A
Sbjct: 288 RA 289


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  350 bits (898), Expect = 7e-94
 Identities = 189/307 (61%), Positives = 224/307 (72%), Gaps = 17/307 (5%)
 Frame = +1

Query: 76  MSYSDCFSD-----LICDEDAGIFADEESPE---DFEYPVDIE---ESMAGFVQVEG--- 213
           +S S+CF D     L+C ED+    D  SPE   D + P   E   ES+AGF++ E    
Sbjct: 3   VSCSNCFPDDDDSFLLCGEDSSGIIDS-SPECSSDLDSPPPSEAEAESIAGFIEDERNFV 61

Query: 214 ---DYISRFHSQSLDVSARQESVAWILKVQAFYHFHPLTAYLSVNYLDRFLASRGLPEAN 384
              +Y++RF S+SLD SAR+ESVAWILKVQA+Y F PLTAYLSVNYLDRFL SR LP+ N
Sbjct: 62  PGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLPQTN 121

Query: 385 GWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGPKYIFEPRTICRMELLVLTTLDWRLRS 564
           GWPLQLLS+ACLSLAAKMEEPLVPSLLDLQVEG KY+FEP+TI RMELLVL  LDWRLRS
Sbjct: 122 GWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRS 181

Query: 565 ITPFTFIDFFASKVDSTGTCIGLLISRATEIILTTIQEIDFLDYSPSSVAVASILHAANE 744
           +TPF+F+DFFA K+DS+GT  G LISRAT+IIL+ IQE  FL Y PS +A ASILHAANE
Sbjct: 182 VTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANE 241

Query: 745 VPNLSLFSPGNAAAWCQGLSKXXXXXXXXXXXXXXXDSIISCYQLMQEVVVGQKQRKPPK 924
           +PN S   P +A +WC+GL K               + +I CYQLMQE+V+   +RKPPK
Sbjct: 242 IPNWSFVRPEHAESWCEGLRK---------------EKVIGCYQLMQELVINNNRRKPPK 286

Query: 925 VLPQHRV 945
           VLPQ RV
Sbjct: 287 VLPQLRV 293


>ref|XP_002312511.1| predicted protein [Populus trichocarpa]
           gi|159025697|emb|CAN88849.1| D1-type cyclin [Populus
           trichocarpa] gi|222852331|gb|EEE89878.1| predicted
           protein [Populus trichocarpa]
          Length = 328

 Score =  349 bits (895), Expect = 1e-93
 Identities = 193/305 (63%), Positives = 222/305 (72%), Gaps = 11/305 (3%)
 Frame = +1

Query: 76  MSYSDCFSDLICDEDAGIFADEESPE---DFEYPVDIEES-MAGFVQVEG------DYIS 225
           MSYSDC SDL+C ED+      ESPE   D E    +EES +AGF++ E       DY S
Sbjct: 1   MSYSDCLSDLLCGEDSSDIFSGESPECSSDLESHDFVEESSIAGFIEDERNFVPGYDYFS 60

Query: 226 RFHSQSLDVSARQESVAWILKVQAFYHFHPLTAYLSVNYLDRFLASRGLPEANGWPLQLL 405
           RF SQSLD SAR++SVAWILKVQA Y F PLTAYLSVNYLDRFL SR LP+ +GWPLQLL
Sbjct: 61  RFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRFLYSRRLPQTDGWPLQLL 120

Query: 406 SIACLSLAAKMEEPLVPSLLDLQVEGPKYIFEPRTICRMELLVLTTLDWRLRSITPFTFI 585
           S+ACLSLAAKMEEPLVPSLLDLQVEG KYIFEPRTI RMELLVL  LDWRLRSITPF+F 
Sbjct: 121 SVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSFT 180

Query: 586 DFFASKVDSTGTCIGLLISRATEIILTTIQEIDFLDYSPSSVAVASILHAANEVPNLSLF 765
            FFA K+D  G   G LISRATEIIL+ I+E  FL+Y PSS+A A+IL AAN++PNLSL 
Sbjct: 181 GFFACKLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNLSLV 240

Query: 766 SPGNAAAWCQGLSKXXXXXXXXXXXXXXXDSIISCYQLMQEVVVGQKQRKPPKV-LPQHR 942
           +P +A +WC GLSK               D IISCY+LMQ++V+   +RK  KV LP+ R
Sbjct: 241 NPEHAESWCDGLSK---------------DKIISCYRLMQDLVLDDSRRKSTKVLLPRLR 285

Query: 943 VMTHA 957
           V   A
Sbjct: 286 VTIRA 290


>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score =  347 bits (891), Expect = 4e-93
 Identities = 189/322 (58%), Positives = 230/322 (71%), Gaps = 10/322 (3%)
 Frame = +1

Query: 22  PRWKENDDSNHIFSGVPIMSYSDCFSDLICDEDAG-IFADEESPE---DFEYPVDIEESM 189
           P  K N+ S    + +  +S SDCF+DL+C ED+  IF+  +SPE   D E P    ES+
Sbjct: 27  PPSKSNEKSP---AAIMSLSCSDCFNDLLCSEDSSEIFSTGDSPEYSSDLESPAGTVESI 83

Query: 190 AGFVQVEG------DYISRFHSQSLDVSARQESVAWILKVQAFYHFHPLTAYLSVNYLDR 351
           A F++ E       DY+SRF S+SLD SAR++SVAWILKVQ +Y F PLTAYLSVNYLDR
Sbjct: 84  ASFIEDERNFVPGFDYLSRFQSRSLDASAREDSVAWILKVQTYYRFQPLTAYLSVNYLDR 143

Query: 352 FLASRGLPEANGWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGPKYIFEPRTICRMELL 531
           FL SR LP++ GWP+QLLS+ACLSLAAKMEEPLVPSLLDLQVEG KYIFEPRTI RMELL
Sbjct: 144 FLYSRSLPQSKGWPMQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELL 203

Query: 532 VLTTLDWRLRSITPFTFIDFFASKVDSTGTCIGLLISRATEIILTTIQEIDFLDYSPSSV 711
           VL+ LDWRLRS+TPF+FI FFA K+DS+G   G LISRATEIIL+ +QE  FL+Y PSS+
Sbjct: 204 VLSVLDWRLRSVTPFSFIGFFACKLDSSGAYTGFLISRATEIILSNMQEASFLEYWPSSI 263

Query: 712 AVASILHAANEVPNLSLFSPGNAAAWCQGLSKXXXXXXXXXXXXXXXDSIISCYQLMQEV 891
           A A+IL AANE+PNLSL +P +A +WC GLSK               DS     +LMQ++
Sbjct: 264 AAAAILCAANEIPNLSLVNPEHAESWCDGLSKESKSIFNIVQNPSYPDS-----KLMQDL 318

Query: 892 VVGQKQRKPPKVLPQHRVMTHA 957
           V+   ++  PKVLP  RV   A
Sbjct: 319 VLDNSRKTLPKVLPVLRVTIRA 340


>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
          Length = 327

 Score =  345 bits (886), Expect = 2e-92
 Identities = 191/305 (62%), Positives = 221/305 (72%), Gaps = 11/305 (3%)
 Frame = +1

Query: 76  MSYSDCFSDLICDEDAGIFADEESPE---DFEYPVDIEES-MAGFVQVEG------DYIS 225
           MSYSDC SDL+C ED+      ESPE   D E    +EES +AGF++ E       DY S
Sbjct: 1   MSYSDCLSDLLCGEDSSDIFSGESPECSSDLESHDFVEESSIAGFIEDERNFVPGYDYFS 60

Query: 226 RFHSQSLDVSARQESVAWILKVQAFYHFHPLTAYLSVNYLDRFLASRGLPEANGWPLQLL 405
           RF SQSLD SAR++SVAWILKVQA Y F PLTAYLSVNYLDRFL SR L + +GWPLQLL
Sbjct: 61  RFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRFLYSRRLQQTDGWPLQLL 120

Query: 406 SIACLSLAAKMEEPLVPSLLDLQVEGPKYIFEPRTICRMELLVLTTLDWRLRSITPFTFI 585
           S+ACLSLAAKMEEPLVPSLLDLQVEG KYIFEPRTI RMELLVL  LDWRLRSITPF+F 
Sbjct: 121 SVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSFT 180

Query: 586 DFFASKVDSTGTCIGLLISRATEIILTTIQEIDFLDYSPSSVAVASILHAANEVPNLSLF 765
            FFA K+D  G   G LISRATEIIL+ I+E  FL+Y PSS+A A+IL AAN++PNLSL 
Sbjct: 181 GFFACKLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNLSLV 240

Query: 766 SPGNAAAWCQGLSKXXXXXXXXXXXXXXXDSIISCYQLMQEVVVGQKQRKPPKV-LPQHR 942
           +P +A +WC GLSK               D I+SCY+LMQ++V+   +RK  KV LP+ R
Sbjct: 241 NPEHAESWCDGLSK---------------DKIVSCYRLMQDLVLDDSRRKSTKVLLPRLR 285

Query: 943 VMTHA 957
           V   A
Sbjct: 286 VTIRA 290