BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008262
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ...   183   1e-52
ref|XP_002300192.1| predicted protein [Populus trichocarpa] gi|1...   181   4e-52
ref|XP_002306568.1| predicted protein [Populus trichocarpa] gi|1...   179   4e-52
gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]               181   7e-52
ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v...   180   7e-52

>ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|296087487|emb|CBI34076.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  183 bits (464), Expect(2) = 1e-52
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = +3

Query: 3   RRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 182
           RRRK+VRGCIVSQDLSV+NLVIVKKGE+DLPGLTDTEKPRMRGPKRASKIRKLFNLSKED
Sbjct: 94  RRRKAVRGCIVSQDLSVLNLVIVKKGESDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 153

Query: 183 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 281
           DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP
Sbjct: 154 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 186



 Score = 49.3 bits (116), Expect(2) = 1e-52
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +2

Query: 398 KSEAAEYQKLLATRLKEQRDRRSESPA 478
           KSEAAEYQKLLATRLKEQR+RRSES A
Sbjct: 207 KSEAAEYQKLLATRLKEQRERRSESLA 233


>ref|XP_002300192.1| predicted protein [Populus trichocarpa] gi|118482123|gb|ABK92992.1|
           unknown [Populus trichocarpa]
           gi|222847450|gb|EEE84997.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  181 bits (459), Expect(2) = 4e-52
 Identities = 90/93 (96%), Positives = 92/93 (98%)
 Frame = +3

Query: 3   RRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 182
           RRRKSVRGCIVSQDLSV+NLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED
Sbjct: 94  RRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 153

Query: 183 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 281
           DVRKYVNTYRRTFTTKSGKK SKAPKIQRLVTP
Sbjct: 154 DVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTP 186



 Score = 49.3 bits (116), Expect(2) = 4e-52
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +2

Query: 398 KSEAAEYQKLLATRLKEQRDRRSESPA 478
           KSEAAEYQKLLATRLKEQR+RRSES A
Sbjct: 207 KSEAAEYQKLLATRLKEQRERRSESLA 233


>ref|XP_002306568.1| predicted protein [Populus trichocarpa] gi|118482542|gb|ABK93192.1|
           unknown [Populus trichocarpa]
           gi|222856017|gb|EEE93564.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  179 bits (455), Expect(2) = 4e-52
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 3   RRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 182
           RRRKSVRGCIVSQDLSV+NLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED
Sbjct: 94  RRRKSVRGCIVSQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 153

Query: 183 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 281
           DVRKYVNTYRR+FTTK+GKK SKAPKIQRLVTP
Sbjct: 154 DVRKYVNTYRRSFTTKAGKKVSKAPKIQRLVTP 186



 Score = 50.8 bits (120), Expect(2) = 4e-52
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 398 KSEAAEYQKLLATRLKEQRDRRSESPA 478
           KSEAAEYQKLLATRLKEQRDRRSES A
Sbjct: 207 KSEAAEYQKLLATRLKEQRDRRSESLA 233


>gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]
          Length = 249

 Score =  181 bits (460), Expect(2) = 7e-52
 Identities = 90/93 (96%), Positives = 91/93 (97%)
 Frame = +3

Query: 3   RRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 182
           RRRKSVRGCIVS DLSV+NLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNLSKED
Sbjct: 94  RRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKED 153

Query: 183 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 281
           DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP
Sbjct: 154 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 186



 Score = 48.1 bits (113), Expect(2) = 7e-52
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +2

Query: 398 KSEAAEYQKLLATRLKEQRDRRSESPA 478
           K+EAAEYQKLLATRLKEQR+RRSES A
Sbjct: 207 KAEAAEYQKLLATRLKEQRERRSESLA 233


>ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera]
           gi|302141988|emb|CBI19191.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  180 bits (457), Expect(2) = 7e-52
 Identities = 88/93 (94%), Positives = 93/93 (100%)
 Frame = +3

Query: 3   RRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKED 182
           RRRK+VRGCIVSQDLSV+NLVIVKKGE+DLPGLTDTEKPRMRGPKRASKIRKLFNLSK+D
Sbjct: 94  RRRKAVRGCIVSQDLSVLNLVIVKKGESDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDD 153

Query: 183 DVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTP 281
           DVRKYVNTYRR+FTTKSGKKCSKAPKIQRLVTP
Sbjct: 154 DVRKYVNTYRRSFTTKSGKKCSKAPKIQRLVTP 186



 Score = 49.3 bits (116), Expect(2) = 7e-52
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +2

Query: 398 KSEAAEYQKLLATRLKEQRDRRSESPA 478
           KSEAAEYQKLLATRLKEQR+RRSES A
Sbjct: 207 KSEAAEYQKLLATRLKEQRERRSESLA 233