BLASTX nr result

ID: Cimicifuga21_contig00008209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008209
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]   226   6e-57
ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vini...   225   1e-56
ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R...   217   4e-54
ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|2...   213   5e-53
ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-52

>emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]
          Length = 206

 Score =  226 bits (577), Expect = 6e-57
 Identities = 112/195 (57%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
 Frame = +3

Query: 144 MSKASQSGYGALXXXXXXXXXXXGLE---FFSRAKERGRTIIATRKPWRELADPTSFARP 314
           MS  S +GYG L             E   F SRA +R +T++ATR+PWRE  D ++ +RP
Sbjct: 1   MSLKSPAGYGTLPNASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWREFLDYSALSRP 60

Query: 315 YNLSDAMGRIKKNLGYFRVNYAXXXXXXXXXXXXWHPISMIVFLIVFVGWFYLYFFRDEP 494
           +N SDAM RIK+N+ YFRVNYA            WHP SMIVFLI+FV WF+LYFFRD P
Sbjct: 61  HNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNP 120

Query: 495 IVMFNKTFDDRVILAVLSVVTIIALVFTHVWVNVLVSLIIGAVIVGLHAAFRVTDDLFLD 674
           +V+F++T DDRV+L +L ++T++ALVFT V +NVLVSLIIG  +VGLHAAFR T+DLFL+
Sbjct: 121 VVLFHQTIDDRVVLVLLGLITVVALVFTDVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLN 180

Query: 675 EQEVAEGGLLSVVGG 719
           E+EVAEGGLLSV GG
Sbjct: 181 EEEVAEGGLLSVAGG 195


>ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vinifera]
          Length = 206

 Score =  225 bits (574), Expect = 1e-56
 Identities = 112/195 (57%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
 Frame = +3

Query: 144 MSKASQSGYGALXXXXXXXXXXXGLE---FFSRAKERGRTIIATRKPWRELADPTSFARP 314
           MS  S +GYG L             E   F SRA +R +T++ATR+PWRE  D +  +RP
Sbjct: 1   MSLKSPAGYGTLPNASAAVPSSSTSEQFTFISRATQRTQTLMATRRPWREFLDYSVLSRP 60

Query: 315 YNLSDAMGRIKKNLGYFRVNYAXXXXXXXXXXXXWHPISMIVFLIVFVGWFYLYFFRDEP 494
           +N SDAM RIK+N+ YFRVNYA            WHP SMIVFLI+FV WF+LYFFRD P
Sbjct: 61  HNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNP 120

Query: 495 IVMFNKTFDDRVILAVLSVVTIIALVFTHVWVNVLVSLIIGAVIVGLHAAFRVTDDLFLD 674
           +V+F++T DDRV+L +L ++T++ALVFT V +NVLVSLIIG  +VGLHAAFR T+DLFL+
Sbjct: 121 VVLFHQTIDDRVVLVLLGLITVVALVFTDVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLN 180

Query: 675 EQEVAEGGLLSVVGG 719
           E+EVAEGGLLSV GG
Sbjct: 181 EEEVAEGGLLSVAGG 195


>ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis]
           gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor
           protein, putative [Ricinus communis]
          Length = 216

 Score =  217 bits (553), Expect = 4e-54
 Identities = 102/167 (61%), Positives = 130/167 (77%)
 Frame = +3

Query: 216 LEFFSRAKERGRTIIATRKPWRELADPTSFARPYNLSDAMGRIKKNLGYFRVNYAXXXXX 395
           L F SRA    +++IATR+PW+EL +P+SF+ P N S+AM R+K N+ YFRVNYA     
Sbjct: 36  LTFISRATSATQSVIATRRPWKELLNPSSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLS 95

Query: 396 XXXXXXXWHPISMIVFLIVFVGWFYLYFFRDEPIVMFNKTFDDRVILAVLSVVTIIALVF 575
                  WHP+SMIVF++VF+ WF+LYF RD PIV+FN+ FDDRV+L VL +VTI+ALV 
Sbjct: 96  VLFLSLLWHPVSMIVFIVVFIAWFFLYFSRDGPIVLFNREFDDRVVLVVLGLVTIVALVL 155

Query: 576 THVWVNVLVSLIIGAVIVGLHAAFRVTDDLFLDEQEVAEGGLLSVVG 716
           THV +NVLV+L+IGAV+VG+H AFR T+DLFLDE+  AEGGLLSVVG
Sbjct: 156 THVGLNVLVALMIGAVVVGIHGAFRNTEDLFLDEESAAEGGLLSVVG 202


>ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|222842526|gb|EEE80073.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  213 bits (543), Expect = 5e-53
 Identities = 102/165 (61%), Positives = 126/165 (76%)
 Frame = +3

Query: 222 FFSRAKERGRTIIATRKPWRELADPTSFARPYNLSDAMGRIKKNLGYFRVNYAXXXXXXX 401
           F +RA     TI ATR+PWREL + +SFARP +L D   RIK+NL YFRVNY        
Sbjct: 21  FLTRATNTTSTIFATRRPWRELIEFSSFARPGSLGDTTIRIKRNLSYFRVNYTMIILSIL 80

Query: 402 XXXXXWHPISMIVFLIVFVGWFYLYFFRDEPIVMFNKTFDDRVILAVLSVVTIIALVFTH 581
                WHP+SMIVFLIVFV WF+LYFFRD+P+V+F++T DDRV+L +L V TI+AL+FTH
Sbjct: 81  FLSLLWHPLSMIVFLIVFVAWFFLYFFRDQPLVIFHRTIDDRVVLGLLGVATIVALIFTH 140

Query: 582 VWVNVLVSLIIGAVIVGLHAAFRVTDDLFLDEQEVAEGGLLSVVG 716
           VW+NVLVSL+IGA IV LHAAFR TDD++ D+Q+VA+G LLS VG
Sbjct: 141 VWLNVLVSLLIGAAIVVLHAAFRRTDDMYSDDQDVADGSLLSFVG 185


>ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|222838052|gb|EEE76417.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  212 bits (540), Expect = 1e-52
 Identities = 108/199 (54%), Positives = 136/199 (68%), Gaps = 8/199 (4%)
 Frame = +3

Query: 144 MSKASQSGYGALXXXXXXXXXXXG--------LEFFSRAKERGRTIIATRKPWRELADPT 299
           MS+ +Q+GYG +                    L F SR     +T+IATR+PW+EL   +
Sbjct: 1   MSRKAQAGYGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQELIKLS 60

Query: 300 SFARPYNLSDAMGRIKKNLGYFRVNYAXXXXXXXXXXXXWHPISMIVFLIVFVGWFYLYF 479
           SF RP N +DA+ RIK N+ YFRVNYA            WHPISMIVF+++FV W +LYF
Sbjct: 61  SFIRPNNYNDAISRIKFNVNYFRVNYAMIFLAILFLSLLWHPISMIVFIVMFVAWLFLYF 120

Query: 480 FRDEPIVMFNKTFDDRVILAVLSVVTIIALVFTHVWVNVLVSLIIGAVIVGLHAAFRVTD 659
            RD P+V+FNK+ DDRV+L VL +VTI+ALVFTHV +NVL++LIIG VIVG+HAAFR T+
Sbjct: 121 GRDGPVVVFNKSLDDRVVLCVLGLVTILALVFTHVGLNVLIALIIGVVIVGVHAAFRGTE 180

Query: 660 DLFLDEQEVAEGGLLSVVG 716
           DLFLDE+   EGGLLSVVG
Sbjct: 181 DLFLDEESAVEGGLLSVVG 199


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