BLASTX nr result

ID: Cimicifuga21_contig00008084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008084
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26021.3| unnamed protein product [Vitis vinifera]               70   2e-10
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    65   7e-09
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    58   7e-07
dbj|BAJ85434.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06

>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 50/77 (64%)
 Frame = +1

Query: 13  VRNILSNCSFLEWFSIGRCFCPSPTSLEFAGPSLHLKHLSVCGCFNLLGIEVEAANLVSF 192
           ++++LS CS LEW S+  C C    +L F+  +L LK LS+  CF L  IE+ AA+LV+F
Sbjct: 218 LQDLLSTCSHLEWLSL--CVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTF 275

Query: 193 EYRGPLLRLSFNNVPRV 243
           +Y G L   SF NVP++
Sbjct: 276 KYGGHLPSFSFKNVPKL 292


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +1

Query: 13   VRNILSNCSFLEWFSIGRCFCPSPTSLEFAGPSLHLKHLSVCGCFNLLGIEVEAANLVSF 192
            ++++LS CS LE  S+  C C    +L F+  +L LK LS+  CF L  IE+ AA+LV+F
Sbjct: 1520 LQDLLSTCSHLERLSL--CVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTF 1577

Query: 193  EYRGPLLRLSFNNVPRV 243
            +Y G L   SF NVP++
Sbjct: 1578 KYGGHLPSFSFKNVPKL 1594


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   TGKGVRNIL-SNCSFLEWFSIGRCFCPSPTSLEFAGPSLHLKHLSVCGCFNLLGIEVEAA 177
           TG+ ++++L S C  LE  SI      S  SL+ +G SL LK+L +  C NL  +E+ AA
Sbjct: 194 TGEALQHLLLSWCPLLEVLSIVNS--TSLVSLKVSGSSLKLKYLEMVCCNNLKYLEITAA 251

Query: 178 NLVSFEYRGPLLRLSFNNVPRV 243
           +LVSF+Y GPL+ L F +VP +
Sbjct: 252 SLVSFKYYGPLIGLPFKSVPNL 273


>dbj|BAJ85434.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 444

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 39/68 (57%)
 Frame = +1

Query: 1   TGKGVRNILSNCSFLEWFSIGRCFCPSPTSLEFAGPSLHLKHLSVCGCFNLLGIEVEAAN 180
           +GK ++++LSNC  LEW SI RC       L+  GP  HL +L +  C  L  I   A N
Sbjct: 296 SGKDIQHMLSNCCNLEWLSIVRCHLNG--ELKVNGPLPHLLYLKIASC-RLTNIAFNAVN 352

Query: 181 LVSFEYRG 204
           L +FEYRG
Sbjct: 353 LATFEYRG 360


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