BLASTX nr result

ID: Cimicifuga21_contig00007982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007982
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-43
ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri...   180   3e-43
ref|XP_002894369.1| dynein light chain type 1 family protein [Ar...   172   7e-41
ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Ar...   171   2e-40
ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar...   169   8e-40

>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/94 (88%), Positives = 91/94 (96%)
 Frame = -2

Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451
           MLEGKAL+EDTDMP+KMQ+QAM SAS+ALDLYDVLDCKS+A+HIKKEFD+RYG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60

Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349
           GSNFGCFFTHS+GTFIYF LETLNFLIFKGASSP
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSP 94


>ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544936|gb|EEF46451.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 112

 Score =  180 bits (457), Expect = 3e-43
 Identities = 84/96 (87%), Positives = 91/96 (94%)
 Frame = -2

Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451
           MLEGKAL+EDTDMP+KMQ+QAM  AS+ALDLYDVLDCKSIAAHIKKEFDM+YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60

Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSPPA 343
           GSNFGCFFTHS+G+FIYF LETLNFLIFKGASSP A
Sbjct: 61  GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASSPSA 96


>ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297340211|gb|EFH70628.1| dynein light chain
           type 1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  172 bits (437), Expect = 7e-41
 Identities = 80/94 (85%), Positives = 88/94 (93%)
 Frame = -2

Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451
           MLEGKA+VED+DMP+KMQMQAM+ AS+ALDL+DV DCKSIA HIKKEFD RYGSGWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349
           GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+P
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94


>ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana]
           gi|6850349|gb|AAF29412.1|AC022354_11 dynein light chain,
           putative [Arabidopsis thaliana]
           gi|12323118|gb|AAG51538.1|AC037424_3 unknown protein;
           73838-74229 [Arabidopsis thaliana]
           gi|38454092|gb|AAR20740.1| At1g52250 [Arabidopsis
           thaliana] gi|46402458|gb|AAS92331.1| At1g52250
           [Arabidopsis thaliana] gi|332194653|gb|AEE32774.1| RHO
           guanyl-nucleotide exchange factor 11 [Arabidopsis
           thaliana]
          Length = 94

 Score =  171 bits (434), Expect = 2e-40
 Identities = 80/94 (85%), Positives = 87/94 (92%)
 Frame = -2

Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451
           MLEGKA+VED+DMP+KMQMQAM  AS+ALDL+DV DCKSIA HIKKEFD RYGSGWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349
           GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+P
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94


>ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis
           vinifera] gi|297743256|emb|CBI36123.3| unnamed protein
           product [Vitis vinifera]
          Length = 95

 Score =  169 bits (428), Expect = 8e-40
 Identities = 80/93 (86%), Positives = 88/93 (94%)
 Frame = -2

Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451
           MLEGKAL+EDTDMP+KMQ+QAM  AS+ALD+YDVLD KSIAA+IKKEFDM YG+GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDIYDVLDYKSIAAYIKKEFDMIYGTGWQCVV 60

Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASS 352
           GSNFGCFFTHS+GTFIYF LETLNFLIFKGASS
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93


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