BLASTX nr result
ID: Cimicifuga21_contig00007982
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00007982 (877 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2... 181 3e-43 ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri... 180 3e-43 ref|XP_002894369.1| dynein light chain type 1 family protein [Ar... 172 7e-41 ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Ar... 171 2e-40 ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar... 169 8e-40 >ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1| predicted protein [Populus trichocarpa] Length = 94 Score = 181 bits (458), Expect = 3e-43 Identities = 83/94 (88%), Positives = 91/94 (96%) Frame = -2 Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451 MLEGKAL+EDTDMP+KMQ+QAM SAS+ALDLYDVLDCKS+A+HIKKEFD+RYG GWQCVV Sbjct: 1 MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60 Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349 GSNFGCFFTHS+GTFIYF LETLNFLIFKGASSP Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSP 94 >ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis] gi|223544936|gb|EEF46451.1| cytoplasmic dynein light chain, putative [Ricinus communis] Length = 112 Score = 180 bits (457), Expect = 3e-43 Identities = 84/96 (87%), Positives = 91/96 (94%) Frame = -2 Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451 MLEGKAL+EDTDMP+KMQ+QAM AS+ALDLYDVLDCKSIAAHIKKEFDM+YG GWQCVV Sbjct: 1 MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60 Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSPPA 343 GSNFGCFFTHS+G+FIYF LETLNFLIFKGASSP A Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASSPSA 96 >ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297340211|gb|EFH70628.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp. lyrata] Length = 94 Score = 172 bits (437), Expect = 7e-41 Identities = 80/94 (85%), Positives = 88/94 (93%) Frame = -2 Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451 MLEGKA+VED+DMP+KMQMQAM+ AS+ALDL+DV DCKSIA HIKKEFD RYGSGWQCVV Sbjct: 1 MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60 Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349 GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+P Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94 >ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana] gi|6850349|gb|AAF29412.1|AC022354_11 dynein light chain, putative [Arabidopsis thaliana] gi|12323118|gb|AAG51538.1|AC037424_3 unknown protein; 73838-74229 [Arabidopsis thaliana] gi|38454092|gb|AAR20740.1| At1g52250 [Arabidopsis thaliana] gi|46402458|gb|AAS92331.1| At1g52250 [Arabidopsis thaliana] gi|332194653|gb|AEE32774.1| RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana] Length = 94 Score = 171 bits (434), Expect = 2e-40 Identities = 80/94 (85%), Positives = 87/94 (92%) Frame = -2 Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451 MLEGKA+VED+DMP+KMQMQAM AS+ALDL+DV DCKSIA HIKKEFD RYGSGWQCVV Sbjct: 1 MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60 Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASSP 349 GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+P Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94 >ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis vinifera] gi|297743256|emb|CBI36123.3| unnamed protein product [Vitis vinifera] Length = 95 Score = 169 bits (428), Expect = 8e-40 Identities = 80/93 (86%), Positives = 88/93 (94%) Frame = -2 Query: 630 MLEGKALVEDTDMPIKMQMQAMNSASEALDLYDVLDCKSIAAHIKKEFDMRYGSGWQCVV 451 MLEGKAL+EDTDMP+KMQ+QAM AS+ALD+YDVLD KSIAA+IKKEFDM YG+GWQCVV Sbjct: 1 MLEGKALIEDTDMPVKMQIQAMACASQALDIYDVLDYKSIAAYIKKEFDMIYGTGWQCVV 60 Query: 450 GSNFGCFFTHSEGTFIYFALETLNFLIFKGASS 352 GSNFGCFFTHS+GTFIYF LETLNFLIFKGASS Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93