BLASTX nr result

ID: Cimicifuga21_contig00007981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007981
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519838.1| synaptonemal complex protein, putative [Rici...   135   1e-48
ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|2...   130   3e-47
ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|2...   131   4e-46
ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [...   129   5e-46
ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [...   123   2e-44

>ref|XP_002519838.1| synaptonemal complex protein, putative [Ricinus communis]
           gi|223540884|gb|EEF42442.1| synaptonemal complex
           protein, putative [Ricinus communis]
          Length = 781

 Score =  135 bits (339), Expect(2) = 1e-48
 Identities = 67/113 (59%), Positives = 85/113 (75%)
 Frame = +2

Query: 2   RVEEERRTKEATEVSAKRKMETLHRKIELDFQRHKDDIQRLEHELSRLRASVESTQINCR 181
           +VEEERR+KEA E S KRK+E L  KIE+DFQRHKDD+QRLE ELSRL+AS ES  +N +
Sbjct: 625 QVEEERRSKEAAEASNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLKASAESPDLNHQ 684

Query: 182 TNTIYGGDSNIAKAPNETNARMLHELNQLQDISDKEVDYERKCMLCMKDEVSV 340
            +T+  G     K   ET AR+LHEL++L+D SDK  + ER C++CMKDEVS+
Sbjct: 685 LSTLPSGKPEKTKPQGETIARLLHELDKLEDSSDKGANCERDCIICMKDEVSI 737



 Score = 84.7 bits (208), Expect(2) = 1e-48
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +1

Query: 394 VSVVFLPCAHQVLCASCSQNYGKKDKAKCLCCRVQIEQRISIYGASS 534
           VS+VFLPCAHQV+CASCS NYGKK KA C CCRV IEQRI ++GASS
Sbjct: 735 VSIVFLPCAHQVMCASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 781


>ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|222870230|gb|EEF07361.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  130 bits (326), Expect(2) = 3e-47
 Identities = 63/112 (56%), Positives = 85/112 (75%)
 Frame = +2

Query: 5   VEEERRTKEATEVSAKRKMETLHRKIELDFQRHKDDIQRLEHELSRLRASVESTQINCRT 184
           VEEER  KEA E   KRK+E L  KIE+DFQRHKDD+QRLE E SRL+++ EST++N ++
Sbjct: 574 VEEERCAKEAAEAENKRKLEALRLKIEIDFQRHKDDLQRLEQEFSRLKSAAESTELNNQS 633

Query: 185 NTIYGGDSNIAKAPNETNARMLHELNQLQDISDKEVDYERKCMLCMKDEVSV 340
           N +  G S  AK   ET AR+LHEL++L++ S+K  + +R+CM+C+KDEVSV
Sbjct: 634 NALPSGKSERAKPQGETIARLLHELDKLENSSEKGANCDRECMICLKDEVSV 685



 Score = 85.1 bits (209), Expect(2) = 3e-47
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = +1

Query: 394 VSVVFLPCAHQVLCASCSQNYGKKDKAKCLCCRVQIEQRISIYGASS 534
           VSVVFLPCAHQV+CASCS NYGKK KA C CCRV IEQRI ++GASS
Sbjct: 683 VSVVFLPCAHQVICASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 729


>ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|222834036|gb|EEE72513.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score =  131 bits (329), Expect(2) = 4e-46
 Identities = 62/112 (55%), Positives = 85/112 (75%)
 Frame = +2

Query: 5   VEEERRTKEATEVSAKRKMETLHRKIELDFQRHKDDIQRLEHELSRLRASVESTQINCRT 184
           VEEER +KEATE   KRK++ L RKIE+DFQRHKDD+QRLE E SRL+++ EST++N ++
Sbjct: 563 VEEERCSKEATEAENKRKLDALRRKIEIDFQRHKDDLQRLEQEFSRLKSAAESTELNYQS 622

Query: 185 NTIYGGDSNIAKAPNETNARMLHELNQLQDISDKEVDYERKCMLCMKDEVSV 340
           N +  G S   K    T AR+LHE+ +L++ S+K  + +RKCM+CMKDEVS+
Sbjct: 623 NALPSGKSERTKPQGGTIARLLHEIEKLENSSEKGANCDRKCMICMKDEVSI 674



 Score = 80.1 bits (196), Expect(2) = 4e-46
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +1

Query: 394 VSVVFLPCAHQVLCASCSQNYGKKDKAKCLCCRVQIEQRISIYGASS 534
           VS+V LPCAHQV+CA+CS NYGKK KA C CCRV +EQRI ++GASS
Sbjct: 672 VSIVLLPCAHQVICANCSGNYGKKGKATCPCCRVPVEQRIRVFGASS 718


>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 733

 Score =  129 bits (324), Expect(2) = 5e-46
 Identities = 64/112 (57%), Positives = 87/112 (77%)
 Frame = +2

Query: 5   VEEERRTKEATEVSAKRKMETLHRKIELDFQRHKDDIQRLEHELSRLRASVESTQINCRT 184
           VEEER +KEA E + KRK+ETL  KIE+DFQRHKDD+ RLE ELSRL+AS +S +++ ++
Sbjct: 578 VEEERHSKEAAESNNKRKLETLRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHNQS 637

Query: 185 NTIYGGDSNIAKAPNETNARMLHELNQLQDISDKEVDYERKCMLCMKDEVSV 340
           +T    DS  AK   ET AR+L EL+ L+D+S+KEV+  R+C++CMKDEVS+
Sbjct: 638 STSPTSDSEGAKPQRETIARLLQELDNLEDLSEKEVNSNRECIVCMKDEVSI 689



 Score = 81.6 bits (200), Expect(2) = 5e-46
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +1

Query: 394 VSVVFLPCAHQVLCASCSQNYGKKDKAKCLCCRVQIEQRISIYGASS 534
           VS+VFLPCAHQV+CASCS  YG+K KA C CCRVQI+QRI ++GASS
Sbjct: 687 VSIVFLPCAHQVMCASCSDEYGRKGKAICPCCRVQIQQRIRVFGASS 733


>ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 721

 Score =  123 bits (309), Expect(2) = 2e-44
 Identities = 61/112 (54%), Positives = 83/112 (74%)
 Frame = +2

Query: 5   VEEERRTKEATEVSAKRKMETLHRKIELDFQRHKDDIQRLEHELSRLRASVESTQINCRT 184
           VEEER  KEA E + KRK+E L  KIE+DFQRHKDD+ RLE ELSRL+AS +S +++ ++
Sbjct: 566 VEEERHCKEAAESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHNQS 625

Query: 185 NTIYGGDSNIAKAPNETNARMLHELNQLQDISDKEVDYERKCMLCMKDEVSV 340
           +T    D   AK   ET AR+L EL+ L+D S+KE++  R+C++CMKDEVS+
Sbjct: 626 STSPTSDCKGAKPQRETIARLLQELDNLEDFSEKEINSNRECIVCMKDEVSI 677



 Score = 82.4 bits (202), Expect(2) = 2e-44
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +1

Query: 394 VSVVFLPCAHQVLCASCSQNYGKKDKAKCLCCRVQIEQRISIYGASS 534
           VS+VFLPCAHQV+CASCS  YG+K KA C CCRVQI+QRI ++GASS
Sbjct: 675 VSIVFLPCAHQVMCASCSDEYGRKGKATCPCCRVQIQQRIRVFGASS 721


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