BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007796
         (3742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1687   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1582   0.0  
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...  1582   0.0  
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...  1581   0.0  
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...  1569   0.0  

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1687 bits (4369), Expect = 0.0
 Identities = 853/1094 (77%), Positives = 948/1094 (86%), Gaps = 3/1094 (0%)
 Frame = +2

Query: 179  MTCVYIPVQNSEEEVRVVLDQLPHDASDILDILKAEQASLDLWLIIAREYFKQGKVEQFL 358
            M  VYIPVQNSEEEVRV LDQLP DASDILDILKAEQA LDLWLIIAREYFKQGK++QF 
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 359  QILEEGSSSDIDEYYADVKYERIAILNALGAYHSYLGKIEPKQREKEDHFIKATQYYNKA 538
            QILEEGSS +IDEYYADV+YERIAILNALGAY+SYLGKIE KQREKE+HFI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 539  TRIDKHEASTWVGKGQLLLAKGDLEQASAVFKIVLDGDKNNVPALLGQACVHFNRGRYSD 718
            +RID HEASTWVGKGQLLLAKGD+EQA A FKIVLDGD++NVPALLGQACV FNRGRYSD
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 719  SLDLYKRALQVYPSCPGAVRLGIGLCRYKLGHFEKARQAFERVLQLDPDNVEALVALGMM 898
            SLDLYKRALQVYP CP AVR+GIGLC YKLG FEKAR+AF+RVLQLDP+NVEALVALG+M
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 899  DLQTNETDEIRKGMEKMQIAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSDH 1078
            DL TN+   IRKGMEKMQ AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1079 GLLKSHSYYNLARSYHSKGDYEKAGLHYMQSVKESSRPHDFVLPYYGLGQVQLKSGDFRS 1258
            G  KSHSYYNLARSYHSKGDYEKAGL+YM SVKES++PHDFVLPYYGLGQVQLK GDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 1259 SLSNFEKVLEVYPENCETLKVVGHIYVQLGQNEKALEFLRKATRIDPRDAQAFLEMGELL 1438
            SLSNFEKVLEVYPENCE LK +GHIYVQLGQ EKA E+LRKAT+IDPRDAQAFL++GELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 1439 ISSDAGAALDAFKTARGLFKKSGEDTPIELLNNIGVLHFERGEFELAEQTFKETLGDGIW 1618
            I+SD GAALDAFKTARGL KK GE+ PIELLNNIGVL+FERGEFELAEQTFKE +GDGIW
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 1619 LALMSGKICSFAVDSEASTRQYRDVQLFQRLEEEGVSVDLQWDKVTTLFNYARLLEELHD 1798
            L+ +  K  S+A D+  S   ++D+QLF +LEE+G  V+L W+KVT LFN ARLLE+L++
Sbjct: 481  LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 1799 TEKASILYRLILFKYPDYQDAYLRLAAIAKARNNIQLSIELIGDALKVNEKCPDALSMLG 1978
            T+ ASILYRLILFK+PDY DAYLRLAAIAKARNNIQLSIEL+GDALKVN+K P++L MLG
Sbjct: 541  TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 1979 ALELKNDDWVKAKETFRAAREATDGKDSYAALSLGNWNYFAAVRSEKRGNKLEATHLEKA 2158
             LELKNDDWVKAKETFR+A +ATDGKDSYA LSLGNWNYFAA+RSEKR  KLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 2159 KELYTKVLVQHPSNLYAANGAAVVLAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 2338
            KELYT+VLVQH +NLYAANGA VVLAEKG FDVSKDIFTQVQEAASG++FVQMPDVWINL
Sbjct: 661  KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 2339 AHVYFAQGQFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 2518
            AHVYFAQG FALAVKMYQNCLRKFYYNTD+QVLLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 2519 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELQNAVRVFSQLSAASNHHLHGF 2698
            PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAEL+NAVR+FSQLSAASN H HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840

Query: 2699 DEKKIETHVGYCKHLLEAAKVHCEAAXXXXXXXXXXLEVARQVTLXXXXXXXXXXXXXYQ 2878
            DEKKIETHVGYCKHLLEAAKVHCEAA          +E+ARQV L             +Q
Sbjct: 841  DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900

Query: 2879 LERRKQEDEMKQVRQQEEHFERVKEQWKSSTPASKRKDRSHAEDDEGGHSENXXXXXXXX 3058
            LERRKQEDE+K+V QQE+HFERVKEQWKS+   SKRK+RS  +DDEGG SE         
Sbjct: 901  LERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSER-RRRKGGK 959

Query: 3059 XXXXXXSQYEMDEAEPNY--DHEEMEDDDANMINDGEKDTNQMNEQDNNGEENAQDLLAA 3232
                  S+Y+ +EA  +   D +EMED+D NM  +  + TNQMN QD++GE++AQDLLAA
Sbjct: 960  RRKKDKSRYDSEEARADAMDDQDEMEDEDTNM--NHRESTNQMNNQDDDGEDDAQDLLAA 1017

Query: 3233 AGLEDSDVEDDADEPSSAINRRRRAWSESDEDEPSDRKLDSGPNKETSAD-PESDGEFRE 3409
            AGLEDSD EDD   PSS  NRR+RAWSESDEDEP D++ +S P +E SA+  ESDGE ++
Sbjct: 1018 AGLEDSDAEDDMAGPSSG-NRRKRAWSESDEDEPQDQRPESSPVRENSAEVQESDGEIKD 1076

Query: 3410 ETEELNRDSYGDED 3451
            + ++ N D+  D++
Sbjct: 1077 DNDKPNGDAAEDDE 1090


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1582 bits (4096), Expect = 0.0
 Identities = 812/1095 (74%), Positives = 917/1095 (83%), Gaps = 4/1095 (0%)
 Frame = +2

Query: 179  MTCVYIPVQNSEEEVRVVLDQLPHDASDILDILKAEQASLDLWLIIAREYFKQGKVEQFL 358
            M  VYIPVQNSEEEVRV LDQLP DASDILDILKAEQA LDLWLIIAREYFKQGK++Q+ 
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 359  QILEEGSSSDIDEYYADVKYERIAILNALGAYHSYLGKIEPKQREKEDHFIKATQYYNKA 538
            QILEEGSS +IDEYYADV+YERIAILNALGAY+SYLGKIE KQREKE+HFI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 539  TRIDKHEASTWVGKGQLLLAKGDLEQASAVFKIVLDGDKNNVPALLGQACVHFNRGRYSD 718
            +RID HE STWVGKGQLLLAKG++EQASA FKIVLDGD +NVPALLGQACV FNRGR+SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 719  SLDLYKRALQVYPSCPGAVRLGIGLCRYKLGHFEKARQAFERVLQLDPDNVEALVALGMM 898
            SL+LYKR LQVYP+CP AVRLGIGLCRYKLG FEKA+QAFERVLQLDP+NVE+L+AL +M
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 899  DLQTNETDEIRKGMEKMQIAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSDH 1078
            DL+TNE   IR GM KMQ AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1079 GLLKSHSYYNLARSYHSKGDYEKAGLHYMQSVKESSRPHDFVLPYYGLGQVQLKSGDFRS 1258
            G  KSHSYYNLARSYHSKGDY+KAG++YM SVKE ++PH+FV PYYGLGQVQ+K GDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 1259 SLSNFEKVLEVYPENCETLKVVGHIYVQLGQNEKALEFLRKATRIDPRDAQAFLEMGELL 1438
            +LSNFEKVLEVYP+NCETLK +GHIYVQLGQ +K  +F+RKAT+IDPRDAQAFLE+GELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 1439 ISSDAGAALDAFKTARGLFKKSGEDTPIELLNNIGVLHFERGEFELAEQTFKETLGDGIW 1618
            I SD GAALDAFKTA  LFKK G++ PIELLNNIGVL FERGEFELA QTFKE LGDG+W
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 1619 LALMSGKICSFAVDSEASTRQYRDVQLFQRLEEEGVSVDLQWDKVTTLFNYARLLEELHD 1798
            L+ ++ +  S ++D+  ST Q++D+QLF  LE  G  V++ WDKVT LFN ARLLE+L+D
Sbjct: 481  LSFINEENKS-SIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539

Query: 1799 TEKASILYRLILFKYPDYQDAYLRLAAIAKARNNIQLSIELIGDALKVNEKCPDALSMLG 1978
            +  ASI YRLILFKYPDY DAYLRLAAIAKARNNI LSIEL+ DALKVN KCP+ALSMLG
Sbjct: 540  SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1979 ALELKNDDWVKAKETFRAAREATDGKDSYAALSLGNWNYFAAVRSEKRGNKLEATHLEKA 2158
             LELKNDDWVKAKET R A +ATDGKDSYA LSLGNWNYFAAVR+EKR  KLEATHLEKA
Sbjct: 600  ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 2159 KELYTKVLVQHPSNLYAANGAAVVLAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 2338
            KEL T+VL+QH SNLYAANGAAVVLAEKG FDVSKDIFTQVQEAASG++FVQMPDVWINL
Sbjct: 660  KELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 2339 AHVYFAQGQFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 2518
            AHVYFAQG F LAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 2519 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELQNAVRVFSQLSAASNHHLHGF 2698
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAELQNAVRVFSQLSAASN H+HGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 2699 DEKKIETHVGYCKHLLEAAKVHCEAAXXXXXXXXXXLEVARQVTLXXXXXXXXXXXXXYQ 2878
            DEKKI+THVGYC HLL AAKVH EAA           E+ARQV L             +Q
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 2879 LERRKQEDEMKQVRQQEEHFERVKEQWKSSTPASKRKDRSHAEDDEGGHSENXXXXXXXX 3058
            +ERRKQEDE+K+V++QEEHF RVKEQWKSS+  SKR++RS  +D+EGG  E         
Sbjct: 900  MERRKQEDELKRVQKQEEHFRRVKEQWKSSS-HSKRRERS--DDEEGGTGEKKRKKGGKR 956

Query: 3059 XXXXXXSQYEMDEAEPN---YDHEEMEDDDANMINDGEKDTNQMNEQDNNGEENAQDLLA 3229
                  S+   D  EP     D + MED++A+ IN  E+   QMN+   + EENAQ LLA
Sbjct: 957  RKKDKHSKLRYDAEEPEDDLMDEQGMEDEEAD-INYREEPQTQMND---DAEENAQGLLA 1012

Query: 3230 AAGLEDSDVEDDADEPSSAINRRRRAWSESDEDEPSDRKLDSGPNKETSADPE-SDGEFR 3406
            AAGLEDSD +++   PSS+I RRR+A SESD+DEP  ++  S P ++ SAD + SDGE R
Sbjct: 1013 AAGLEDSDADEETAAPSSSIARRRQALSESDDDEPLLQR-QSSPVRQNSADMQLSDGEIR 1071

Query: 3407 EETEELNRDSYGDED 3451
             + ++ N D   DE+
Sbjct: 1072 -DGDKTNGDDGNDEE 1085


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 1582 bits (4095), Expect = 0.0
 Identities = 801/1061 (75%), Positives = 902/1061 (85%), Gaps = 2/1061 (0%)
 Frame = +2

Query: 179  MTCVYIPVQNSEEEVRVVLDQLPHDASDILDILKAEQASLDLWLIIAREYFKQGKVEQFL 358
            M  VYIPVQNSEEEVRV LDQLP DASDILDILKAEQA LDLWLIIAREYFKQGK++QF 
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 359  QILEEGSSSDIDEYYADVKYERIAILNALGAYHSYLGKIEPKQREKEDHFIKATQYYNKA 538
            QILEEGSS +IDEYYADV+YERIAILNALGAY+SYLGK+E KQREKE++FI+AT++YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 539  TRIDKHEASTWVGKGQLLLAKGDLEQASAVFKIVLDGDKNNVPALLGQACVHFNRGRYSD 718
            +RID HE STWVGKGQLLLAKG++EQASA F+IVL+GD++NV ALLGQACV ++RG Y +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 719  SLDLYKRALQVYPSCPGAVRLGIGLCRYKLGHFEKARQAFERVLQLDPDNVEALVALGMM 898
            SL L+KRALQVYP CPGAVRLGIG C YKLGH  KA  AF+R   LDP+NVEALV+L ++
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 899  DLQTNETDEIRKGMEKMQIAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSDH 1078
            DLQTNE   IRKGMEKMQ AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 1079 GLLKSHSYYNLARSYHSKGDYEKAGLHYMQSVKESSRPHDFVLPYYGLGQVQLKSGDFRS 1258
            G  KSHSYYNLARSYHSKGDYE A  +Y  SVKE ++P +FV PYYGLGQVQLK G+ ++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 1259 SLSNFEKVLEVYPENCETLKVVGHIYVQLGQNEKALEFLRKATRIDPRDAQAFLEMGELL 1438
            +LSNFEKVLEVYP+NCETLKV+GHIYVQLGQ EKA EFLRKA +IDPRDAQAFL++GELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 1439 ISSDAGAALDAFKTARGLFKKSGEDTPIELLNNIGVLHFERGEFELAEQTFKETLGDGIW 1618
            IS+D GAALDAFKTAR L KK GE+ PIE+LNNI V+HFER E ELA Q FKE LGDGIW
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 1619 LALMSGKICSFAVDSEASTRQYRDVQLFQRLEEEGVSVDLQWDKVTTLFNYARLLEELHD 1798
            L  + GK  ++ VD+ +S  QY+D+Q+F+RLEEEG SV+L W+KVTTLFN ARLLE+LH+
Sbjct: 478  LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537

Query: 1799 TEKASILYRLILFKYPDYQDAYLRLAAIAKARNNIQLSIELIGDALKVNEKCPDALSMLG 1978
            TE AS LYRLILFKYPDY DAYLRLAAIAKARNN+ LSIEL+ +AL VN+KCP+ALSMLG
Sbjct: 538  TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597

Query: 1979 ALELKNDDWVKAKETFRAAREATDGKDSYAALSLGNWNYFAAVRSEKRGNKLEATHLEKA 2158
             LELKNDDWVKAKETFRAA EATDGKDSYA LSLGNWNYFAA+R+EKR  KLEATHLEKA
Sbjct: 598  DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 657

Query: 2159 KELYTKVLVQHPSNLYAANGAAVVLAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 2338
            KELYT+VLVQH +NLYAANGA VVLAEKG FDVSKD+FTQVQEAASG+IFVQMPDVWINL
Sbjct: 658  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 717

Query: 2339 AHVYFAQGQFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 2518
            AHVYFAQG FALAVKMYQNCL+KF+YNTD+Q+LLYLARTHYEAEQWQDCK+TLLRAIHL 
Sbjct: 718  AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 777

Query: 2519 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELQNAVRVFSQLSAASNHHLHGF 2698
            PSNYTLRFDAGVAMQKFSASTLQKTKRT DEVRSTV EL+NAVR+FSQLSAASN + +GF
Sbjct: 778  PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 837

Query: 2699 DEKKIETHVGYCKHLLEAAKVHCEAAXXXXXXXXXXLEVARQVTLXXXXXXXXXXXXXYQ 2878
            DEKKI THV YCKHLLEAA VH EAA          L++ARQ+ L             +Q
Sbjct: 838  DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 897

Query: 2879 LERRKQEDEMKQVRQQEEHFERVKEQWKSSTPASKRKDRSHAEDDEGGHSE--NXXXXXX 3052
            LERRKQEDE+K+VRQQEEHFERVKEQWKSST ASKR+DR+  +D EGGH E         
Sbjct: 898  LERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKR 957

Query: 3053 XXXXXXXXSQYEMDEAEPNYDHEEMEDDDANMINDGEKDTNQMNEQDNNGEENAQDLLAA 3232
                    S+YEM+EA+   DH+E EDDDAN+  +  +   QMN+QD+N EENAQD+LAA
Sbjct: 958  RKKEKSSRSRYEMEEADMMDDHDEPEDDDANV--NFREPGYQMNDQDDNAEENAQDVLAA 1015

Query: 3233 AGLEDSDVEDDADEPSSAINRRRRAWSESDEDEPSDRKLDS 3355
            AGLEDSD +DDA  PSSA  RR+RAWSESDEDE S+RK  S
Sbjct: 1016 AGLEDSDADDDAAAPSSA-GRRKRAWSESDEDEISERKPQS 1055


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score = 1581 bits (4094), Expect = 0.0
 Identities = 812/1094 (74%), Positives = 922/1094 (84%), Gaps = 3/1094 (0%)
 Frame = +2

Query: 179  MTCVYIPVQNSEEEVRVVLDQLPHDASDILDILKAEQASLDLWLIIAREYFKQGKVEQFL 358
            M  VYIPVQNSEEEVRV LDQLP DASDILDILKAEQA LDLWL+IAREYFKQGK++QF 
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 359  QILEEGSSSDIDEYYADVKYERIAILNALGAYHSYLGKIEPKQREKEDHFIKATQYYNKA 538
            QILEEGSS +ID+YYADV+YERIAILNALGAY+SYLGKIE KQREKE+HFI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 539  TRIDKHEASTWVGKGQLLLAKGDLEQASAVFKIVLDGDKNNVPALLGQACVHFNRGRYSD 718
            +RID HE STWVGKGQLLLAKG++EQASA FKIVLDGD++NVPALLGQACV FNRGRYSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 719  SLDLYKRALQVYPSCPGAVRLGIGLCRYKLGHFEKARQAFERVLQLDPDNVEALVALGMM 898
            SL+LYKRAL VYP CP AVRLGIGLCRYKLG FEKA+QAFER   LDP+NVEALVAL +M
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 899  DLQTNETDEIRKGMEKMQIAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSDH 1078
            DL+TNE   IR GM KMQ AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 1079 GLLKSHSYYNLARSYHSKGDYEKAGLHYMQSVKESSRPHDFVLPYYGLGQVQLKSGDFRS 1258
            G  KSHSYYNLARSYHSKGDY+KAG++YM SVKE ++PH+FV PYYGLGQVQ+K GDF+S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 1259 SLSNFEKVLEVYPENCETLKVVGHIYVQLGQNEKALEFLRKATRIDPRDAQAFLEMGELL 1438
            +LSNFEKVLEVYP+NCETLK +GHIYVQLGQ +K  +F+RKAT+IDPRDAQAFLE+GELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 1439 ISSDAGAALDAFKTARGLFKKSGEDTPIELLNNIGVLHFERGEFELAEQTFKETLGDGIW 1618
            I SD GAALDAFKTAR LFKK G++ PIELLNNIGVL FERGEFELA+QTFKE LGDG+W
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 1619 LALMSGKICSFAVDSEASTRQYRDVQLFQRLEEEGVSVDLQWDKVTTLFNYARLLEELHD 1798
            L+ ++ +  S ++D+  ST Q++D++LF  LE  G  V++ WDKVT LFN ARLLE+L+D
Sbjct: 478  LSFINEEKKS-SIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 536

Query: 1799 TEKASILYRLILFKYPDYQDAYLRLAAIAKARNNIQLSIELIGDALKVNEKCPDALSMLG 1978
            +  ASILYRL+LFKYPDY DAYLRLAAIAKARNNI LSIEL+ DALKVN KCP+ALSMLG
Sbjct: 537  SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 596

Query: 1979 ALELKNDDWVKAKETFRAAREATDGKDSYAALSLGNWNYFAAVRSEKRGNKLEATHLEKA 2158
             LELKNDDWVKAKET RAA +AT+GKDSYA+LSLGNWNYFAAVR+EKR  KLEATHLEKA
Sbjct: 597  ELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKA 656

Query: 2159 KELYTKVLVQHPSNLYAANGAAVVLAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 2338
            KELYT+VL+QH SNLYAANGAAVVLAEKG FDVSKDIFTQVQEAASG++FVQMPDVWINL
Sbjct: 657  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 716

Query: 2339 AHVYFAQGQFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 2518
            AHVYFAQG F LAVKMYQNCLRKFY+NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 717  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 776

Query: 2519 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELQNAVRVFSQLSAASNHHLHGF 2698
            PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAELQNAVRVFSQLSAASN H+HGF
Sbjct: 777  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 836

Query: 2699 DEKKIETHVGYCKHLLEAAKVHCEAAXXXXXXXXXXLEVARQVTLXXXXXXXXXXXXXYQ 2878
            DEKKI+THVGYC HLL AAKVH EAA           E+ARQV               +Q
Sbjct: 837  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQ 896

Query: 2879 LERRKQEDEMKQVRQQEEHFERVKEQWKSSTPASKRKDRSHAEDDEG-GHSENXXXXXXX 3055
            +ERRKQEDE+K+V+QQEEHF RVKEQWKSS+  SKR++RS  E+  G G  +        
Sbjct: 897  MERRKQEDELKRVQQQEEHFRRVKEQWKSSS-HSKRRERSDDEEGGGTGEKKRKKGGKRR 955

Query: 3056 XXXXXXXSQYEMDEAEPN-YDHEEMEDDDANMINDGEKDTNQMNEQDNNGEENAQDLLAA 3232
                   S+Y+ +E E +  D +EMED++A+ IN  E+   QMN+   + EENAQ LLAA
Sbjct: 956  KKDKHSKSRYDTEEPENDMMDEQEMEDEEAD-INYREEPQTQMND---DAEENAQGLLAA 1011

Query: 3233 AGLEDSDVEDDADEPSSAINRRRRAWSESDEDEPSDRKLDSGPNKETSADPE-SDGEFRE 3409
            AGLEDSD +++A  PSS+I RRR+A SESD+DEP  ++  S P +E SAD + SDGE R 
Sbjct: 1012 AGLEDSDADEEAPAPSSSIARRRQALSESDDDEPLIQR-QSSPARENSADMQLSDGEIR- 1069

Query: 3410 ETEELNRDSYGDED 3451
            + ++ N D   +E+
Sbjct: 1070 DGDKTNGDDGSEEE 1083


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1569 bits (4062), Expect = 0.0
 Identities = 801/1080 (74%), Positives = 903/1080 (83%), Gaps = 4/1080 (0%)
 Frame = +2

Query: 179  MTCVYIPVQNSEEEVRVVLDQLPHDASDILDILKAEQASLDLWLIIAREYFKQGKVEQFL 358
            M CVYIPVQNSEEEVRV LDQLP DASDILDILKAEQA LDLWLIIAREYFKQGK+EQF 
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 359  QILEEGSSSDIDEYYADVKYERIAILNALGAYHSYLGKIEPKQREKEDHFIKATQYYNKA 538
            QILEEGSS +IDEYYADV+YERIAILNALGAY+SYLGKIE KQREKE+HFI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 539  TRIDKHEASTWVGKGQLLLAKGDLEQASAVFKIVLDGDKNNVPALLGQACVHFNRGRYSD 718
            +RID HE STWVGKGQLLL KG++EQA A FKIVLDGD++NVPALLGQACV FNRG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 719  SLDLYKRALQVYPSCPGAVRLGIGLCRYKLGHFEKARQAFERVLQLDPDNVEALVALGMM 898
            SL+LYKRALQVYP CP AVRLGIGLCRY+L  + KA+QAFER   LDP+NVEALV L ++
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 899  DLQTNETDEIRKGMEKMQIAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSDH 1078
            DL TNE   IR GMEKMQ AFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+++H
Sbjct: 238  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 1079 GLLKSHSYYNLARSYHSKGDYEKAGLHYMQSVKESSRPHDFVLPYYGLGQVQLKSGDFRS 1258
            G  KSHS+YNLARSYHSKGDYEKAGL+YM S KE+++P +FV PYYGLGQVQLK GD RS
Sbjct: 298  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 1259 SLSNFEKVLEVYPENCETLKVVGHIYVQLGQNEKALEFLRKATRIDPRDAQAFLEMGELL 1438
            +LSNFEKVLEVYP+NCETLKV+GHIYVQLGQ EKA E LRKAT+IDPRDAQAFL++GELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 1439 ISSDAGAALDAFKTARGLFKKSGEDTPIELLNNIGVLHFERGEFELAEQTFKETLGDGIW 1618
            IS+D  AALDAFKTA  L KK G++ PIE+LNN+GVLHFER EFELAE+ FKE LGDGIW
Sbjct: 418  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 1619 LALMSGKICSFAVDSEASTRQYRDVQLFQRLEEEGVSVDLQWDKVTTLFNYARLLEELHD 1798
            L  + GK+   A+++ AS  QY+DV+LF +LE EG ++ L W KVT+LFN ARLLE+LH 
Sbjct: 478  LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537

Query: 1799 TEKASILYRLILFKYPDYQDAYLRLAAIAKARNNIQLSIELIGDALKVNEKCPDALSMLG 1978
             E +S+LYRLILFKYPDY DAYLRLA+IAKARN +QLSIEL+ DALKVN+KC +ALSMLG
Sbjct: 538  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597

Query: 1979 ALELKNDDWVKAKETFRAAREATDGKDSYAALSLGNWNYFAAVRSEKRGNKLEATHLEKA 2158
             LELKNDDWV+AKETFRAA EATDGKDSYA LSLGNWNYFAA+R+EKR  KLEATHLEK+
Sbjct: 598  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 657

Query: 2159 KELYTKVLVQHPSNLYAANGAAVVLAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 2338
            KELYT+VLVQHP+NLYAANGA V+LAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL
Sbjct: 658  KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 717

Query: 2339 AHVYFAQGQFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 2518
            AHVYFAQG F+LAVKMYQNCLRKFYYNTD Q+LLYLART+YEAEQWQDCKKTLLRAIHLA
Sbjct: 718  AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 777

Query: 2519 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELQNAVRVFSQLSAASNHHLHGF 2698
            PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAEL+NAVRVFSQLSAASN H HGF
Sbjct: 778  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 837

Query: 2699 DEKKIETHVGYCKHLLEAAKVHCEAAXXXXXXXXXXLEVARQVTLXXXXXXXXXXXXXYQ 2878
            DEKKI+THVGYCKHLLEAA VH +AA           E+ARQV L             +Q
Sbjct: 838  DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 897

Query: 2879 LERRKQEDEMKQVRQQEEHFERVKEQWKSSTPASKRKDRSHAEDDEGGHSE--NXXXXXX 3052
            LERRK EDE K++ QQE+HF+RVKEQWKS TPA KR++RS  +DDE G+SE         
Sbjct: 898  LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPA-KRRERSEIDDDEAGNSEKRRRKGGKR 956

Query: 3053 XXXXXXXXSQYEMDEAEPN-YDHEEMEDDDANMINDGEKDTNQMNEQDNNGEENAQDLLA 3229
                    S YE +EA+ +  D +E+ ++D N+     +  +Q+N+Q ++ E N QD LA
Sbjct: 957  RKKDRKGKSHYETEEADNDMMDDQELYNEDNNI--SYRESRSQVNDQGDDFEGNDQDALA 1014

Query: 3230 AAGLEDSDVEDDADEPSSAINRRRRAWSESDEDEPSDRKLDSGPNKETSADPE-SDGEFR 3406
             AGLEDSD ED+A  PSS   RRR  WS+S+EDEP D + +S   +E SA  E SDGE R
Sbjct: 1015 EAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1074