BLASTX nr result

ID: Cimicifuga21_contig00007779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007779
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   445   e-122
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   437   e-120
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   437   e-120
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   437   e-120
sp|P42056.2|VDAC2_SOLTU RecName: Full=Mitochondrial outer membra...   436   e-120

>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
            isoform 1 [Vitis vinifera]
          Length = 276

 Score =  445 bits (1144), Expect = e-122
 Identities = 217/274 (79%), Positives = 245/274 (89%)
 Frame = +1

Query: 274  KGPGLYTDIGKKAKDLLNKDYQSDQKFTLTTYSDSGVAITSTGTKKGDLFLADVNAQLKH 453
            KGPGLY+DIGK A+DLL +DYQSD KFT+TTY+ SGVAITS+GTKKG+LF+ADVN QLK+
Sbjct: 3    KGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLKN 62

Query: 454  KNITADFKVDTNSKLFTTIKLDEPAPGLKTILSFVAPDQKSAKVELQYLHSHAGITTSIG 633
            KNIT D KVDTNS LFTTI +DEPAPGLKTI SF+ PDQ+S KVELQYLH +AGI+TSIG
Sbjct: 63   KNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIG 122

Query: 634  LTANPIVNFSGVIGTNAVSLGTDVSFDTATRNLTKCNSGLSFTNKDLVASLALNDKGDTL 813
            LTANPIVNFSGV+G N +SLGTD+SFDTAT N TKCN+GL F+N DL+A+L LNDKGDTL
Sbjct: 123  LTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTL 182

Query: 814  NASYYHLLSPLTLTAVGAEISHNFVTNENTLTIGSQHALDPLTMVKARVNNYGKASALLQ 993
            NASYYH +SPLT TAVGAE+SH F TNENTLTIG+QHALDPLT VKAR NN GK SAL+Q
Sbjct: 183  NASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSALIQ 242

Query: 994  HEWRPKSLFTISGEVDTRAIEKSAKIGMAIALKP 1095
            HEWRPKSLFTISGEVD RA+EKSAKIG+A+ALKP
Sbjct: 243  HEWRPKSLFTISGEVDARAVEKSAKIGLALALKP 276


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34 kDa-like
            [Cucumis sativus] gi|449523227|ref|XP_004168625.1|
            PREDICTED: mitochondrial outer membrane protein porin of
            34 kDa-like [Cucumis sativus]
          Length = 276

 Score =  437 bits (1124), Expect = e-120
 Identities = 210/274 (76%), Positives = 246/274 (89%)
 Frame = +1

Query: 274  KGPGLYTDIGKKAKDLLNKDYQSDQKFTLTTYSDSGVAITSTGTKKGDLFLADVNAQLKH 453
            KGPGLY+DIGK+A+DLL KDYQSD KFT+TTYS +GVAITS+GTKKGDLFLADVN QLK+
Sbjct: 3    KGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKN 62

Query: 454  KNITADFKVDTNSKLFTTIKLDEPAPGLKTILSFVAPDQKSAKVELQYLHSHAGITTSIG 633
            KNIT D KVDT+S L TTI +DEPAPGLK I SF  PDQ+S KVELQYLH +AGI+TSIG
Sbjct: 63   KNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIG 122

Query: 634  LTANPIVNFSGVIGTNAVSLGTDVSFDTATRNLTKCNSGLSFTNKDLVASLALNDKGDTL 813
            LTANPIVNFSGV+G+N ++LGTD+SFDT T N TK N+GLSF N DL+ASL LNDKGDTL
Sbjct: 123  LTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGDTL 182

Query: 814  NASYYHLLSPLTLTAVGAEISHNFVTNENTLTIGSQHALDPLTMVKARVNNYGKASALLQ 993
            +ASYYH ++PLT TAVGAE++H+F +NENT+T+G+QHALDPLT VKARVNN+GKASAL+Q
Sbjct: 183  SASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASALIQ 242

Query: 994  HEWRPKSLFTISGEVDTRAIEKSAKIGMAIALKP 1095
            HEWRPKS FT+SGEVDT+AIEKSAK+G+A+ALKP
Sbjct: 243  HEWRPKSFFTVSGEVDTKAIEKSAKVGLALALKP 276


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|118481103|gb|ABK92505.1| unknown [Populus
            trichocarpa] gi|222852606|gb|EEE90153.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  437 bits (1123), Expect = e-120
 Identities = 210/274 (76%), Positives = 247/274 (90%)
 Frame = +1

Query: 274  KGPGLYTDIGKKAKDLLNKDYQSDQKFTLTTYSDSGVAITSTGTKKGDLFLADVNAQLKH 453
            KGPGLY DIGKKA+DLL KDYQSD KFT+TTY+ +GVAITSTG KKG+LFLAD+++QLK+
Sbjct: 3    KGPGLYFDIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSTGIKKGELFLADISSQLKN 62

Query: 454  KNITADFKVDTNSKLFTTIKLDEPAPGLKTILSFVAPDQKSAKVELQYLHSHAGITTSIG 633
            KNIT D KVDTNS L TTI +DEPAPGLKTI SF  PDQ+S KVELQY H +AGI+TS+G
Sbjct: 63   KNITTDVKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLG 122

Query: 634  LTANPIVNFSGVIGTNAVSLGTDVSFDTATRNLTKCNSGLSFTNKDLVASLALNDKGDTL 813
            LTANPIVNFSGV+G+N V+LGTD+SFDTAT N TKCN+GLS+TN DL+ASL +NDKGDTL
Sbjct: 123  LTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKGDTL 182

Query: 814  NASYYHLLSPLTLTAVGAEISHNFVTNENTLTIGSQHALDPLTMVKARVNNYGKASALLQ 993
            +ASYYH +SPLT TAVGAE++H+F +NEN LTIG+QHALDPLT VKAR+NNYGK SAL+Q
Sbjct: 183  SASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSALIQ 242

Query: 994  HEWRPKSLFTISGEVDTRAIEKSAKIGMAIALKP 1095
            +EWRPKSLFTISGEVDT+AIEKSAK+G+A++LKP
Sbjct: 243  NEWRPKSLFTISGEVDTKAIEKSAKVGLALSLKP 276


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|118484777|gb|ABK94257.1| unknown [Populus
            trichocarpa] gi|222852528|gb|EEE90075.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/274 (78%), Positives = 244/274 (89%)
 Frame = +1

Query: 274  KGPGLYTDIGKKAKDLLNKDYQSDQKFTLTTYSDSGVAITSTGTKKGDLFLADVNAQLKH 453
            KGPGLY DIGKKA+DLL KDYQSD KFT+TTY+ +GVA+TSTG KKG+LFLADV+ QLK+
Sbjct: 3    KGPGLYVDIGKKARDLLYKDYQSDHKFTVTTYTSTGVALTSTGIKKGELFLADVSGQLKN 62

Query: 454  KNITADFKVDTNSKLFTTIKLDEPAPGLKTILSFVAPDQKSAKVELQYLHSHAGITTSIG 633
            KNIT D KVDTNS L TTI +DEPAPGLKTI SF  PDQ+S KVELQY H +AGI+TS+G
Sbjct: 63   KNITTDIKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLG 122

Query: 634  LTANPIVNFSGVIGTNAVSLGTDVSFDTATRNLTKCNSGLSFTNKDLVASLALNDKGDTL 813
            LTANPIVNFSGVIG+N VSLGTD+SFDTAT N TK N+GLS+TN DL+ASL +NDKGDTL
Sbjct: 123  LTANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKGDTL 182

Query: 814  NASYYHLLSPLTLTAVGAEISHNFVTNENTLTIGSQHALDPLTMVKARVNNYGKASALLQ 993
             ASYYH + PLT TAVGAE++ +F +NENTLTIG+QHALDPLT VKAR+NNYGKASAL+Q
Sbjct: 183  TASYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASALIQ 242

Query: 994  HEWRPKSLFTISGEVDTRAIEKSAKIGMAIALKP 1095
            HEWRPKSLFTISGEVDT+AIEKSAKIG+A+ALKP
Sbjct: 243  HEWRPKSLFTISGEVDTKAIEKSAKIGLALALKP 276


>sp|P42056.2|VDAC2_SOLTU RecName: Full=Mitochondrial outer membrane protein porin of 36 kDa;
            AltName: Full=POM 36; AltName: Full=Voltage-dependent
            anion-selective channel protein; Short=VDAC
            gi|515360|emb|CAA56600.1| 36kDA porin II [Solanum
            tuberosum]
          Length = 276

 Score =  436 bits (1122), Expect = e-120
 Identities = 212/274 (77%), Positives = 247/274 (90%)
 Frame = +1

Query: 274  KGPGLYTDIGKKAKDLLNKDYQSDQKFTLTTYSDSGVAITSTGTKKGDLFLADVNAQLKH 453
            KGPGLY+DIGKKA+DLL +DY SD KFT+TTYS +GVAIT++G KKG+LFLADV+ QLK+
Sbjct: 3    KGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKN 62

Query: 454  KNITADFKVDTNSKLFTTIKLDEPAPGLKTILSFVAPDQKSAKVELQYLHSHAGITTSIG 633
            KNIT D KVDTNS ++TTI +DEPAPGLKTI SFV PDQKS KVELQYLH +AGI TSIG
Sbjct: 63   KNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 122

Query: 634  LTANPIVNFSGVIGTNAVSLGTDVSFDTATRNLTKCNSGLSFTNKDLVASLALNDKGDTL 813
            LTA+P+VNFSGV G N V+LGTD+SFDTAT N TKCN+GLSF++ DL+ASLALNDKGDT+
Sbjct: 123  LTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTV 182

Query: 814  NASYYHLLSPLTLTAVGAEISHNFVTNENTLTIGSQHALDPLTMVKARVNNYGKASALLQ 993
            +ASYYH + P+T TAVGAE++H+F +NENTLTIG+QH LDPLT VKARVN+YGKASAL+Q
Sbjct: 183  SASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQ 242

Query: 994  HEWRPKSLFTISGEVDTRAIEKSAKIGMAIALKP 1095
            HEWRPKSLFTISGEVDTRAIEKSAKIG+A+ALKP
Sbjct: 243  HEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276


Top