BLASTX nr result

ID: Cimicifuga21_contig00007772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007772
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271170.1| PREDICTED: uncharacterized protein LOC100242...    59   4e-07
ref|XP_002298591.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002271170.1| PREDICTED: uncharacterized protein LOC100242361 [Vitis vinifera]
           gi|296081317|emb|CBI17699.3| unnamed protein product
           [Vitis vinifera]
          Length = 817

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = -3

Query: 237 RKEGRFPVHINSMATNASRVPFVPA----SVNSFQLWMVTLWVFSILGFLAVMSVVLFGR 70
           R EG +    +    N S+   +P     + +SF+ W+V LW FS+LGFLAVM VV  GR
Sbjct: 728 RFEGSYVARSDHGPMNISKQSSLPVVTDRAFSSFRFWLVGLWAFSVLGFLAVMLVVFLGR 787

Query: 69  KRQKTRSKGYRNKRR 25
           + +  ++K Y++KRR
Sbjct: 788 RGRGRKTKNYKSKRR 802


>ref|XP_002298591.1| predicted protein [Populus trichocarpa] gi|222845849|gb|EEE83396.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
 Frame = -3

Query: 240 SRKEGRFP----VHINSMATNASRV--PFVPAS--VNSFQLWMVTLWVFSILGFLAVMSV 85
           SRK GRF     V  N + T  S    P VP      S + W+V LW+ S LGFLAVM +
Sbjct: 718 SRKFGRFDGSNAVRSNPVPTKNSEETSPPVPKDGLFGSLRFWVVALWMISGLGFLAVMFM 777

Query: 84  VLFGRKRQKTRSKGYRNKRR 25
           V  GRK + ++SK YR++RR
Sbjct: 778 VFSGRKSKGSKSKTYRSRRR 797


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