BLASTX nr result

ID: Cimicifuga21_contig00007769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007769
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein...   258   1e-66
ref|NP_001237081.1| uncharacterized protein LOC100305815 [Glycin...   249   4e-64
gb|AFK36203.1| unknown [Lotus japonicus]                              249   5e-64
ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein...   246   3e-63
ref|NP_181057.1| glycine cleavage system H protein [Arabidopsis ...   246   4e-63

>ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|297737954|emb|CBI27155.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  258 bits (658), Expect = 1e-66
 Identities = 127/155 (81%), Positives = 141/155 (90%)
 Frame = +3

Query: 42  MASKLLASRFASHFRVSVFHRGFSSSVVKDLKYADSHEWFKADGNSATVGITDHAQDHLG 221
           MAS+L ASR AS+ R+SVFHRGFSS VVKDLKYADSHEW K DGNSA VGITDHAQDHLG
Sbjct: 1   MASRLWASRAASYLRLSVFHRGFSS-VVKDLKYADSHEWVKIDGNSAIVGITDHAQDHLG 59

Query: 222 DVVYVELPEVGASVTQGNSFGAVESVKATSDINSPVSGKVTEVNEELNSSPGLINSSPYE 401
           DVVYVELPE GA+V QG+ FGAVESVKATSDINSPVSGKV EVNEELNSSPGL+N+SPYE
Sbjct: 60  DVVYVELPEAGAAVNQGSGFGAVESVKATSDINSPVSGKVVEVNEELNSSPGLVNASPYE 119

Query: 402 KGWIIKVELSNADEVNSLMDSEQYSKFCEKEDSEH 506
            GWIIKVE+S+  E+NSLMDSEQY+KFCE+ED++H
Sbjct: 120 NGWIIKVEMSDTGELNSLMDSEQYTKFCEEEDAKH 154


>ref|NP_001237081.1| uncharacterized protein LOC100305815 [Glycine max]
           gi|255626687|gb|ACU13688.1| unknown [Glycine max]
          Length = 155

 Score =  249 bits (636), Expect = 4e-64
 Identities = 124/152 (81%), Positives = 138/152 (90%)
 Frame = +3

Query: 51  KLLASRFASHFRVSVFHRGFSSSVVKDLKYADSHEWFKADGNSATVGITDHAQDHLGDVV 230
           +L ASR AS+ R+SVFHRGFS+ VVKDLKYADSHEW K D NSATVGITDHAQDHLGDVV
Sbjct: 5   QLWASRAASYLRISVFHRGFSN-VVKDLKYADSHEWVKVDENSATVGITDHAQDHLGDVV 63

Query: 231 YVELPEVGASVTQGNSFGAVESVKATSDINSPVSGKVTEVNEELNSSPGLINSSPYEKGW 410
           YVELPEVGA+VTQG SFGA+ESVKATSDINSPVSGKV EVNE LNSSP LINSSPY+ GW
Sbjct: 64  YVELPEVGAAVTQGGSFGALESVKATSDINSPVSGKVVEVNEALNSSPALINSSPYKDGW 123

Query: 411 IIKVELSNADEVNSLMDSEQYSKFCEKEDSEH 506
           IIKVE+S+  E+N+LMDS+QYSKFCE+EDS+H
Sbjct: 124 IIKVEISDNGELNNLMDSDQYSKFCEEEDSKH 155


>gb|AFK36203.1| unknown [Lotus japonicus]
          Length = 155

 Score =  249 bits (635), Expect = 5e-64
 Identities = 124/152 (81%), Positives = 136/152 (89%)
 Frame = +3

Query: 51  KLLASRFASHFRVSVFHRGFSSSVVKDLKYADSHEWFKADGNSATVGITDHAQDHLGDVV 230
           +L ASR AS+ R+SVF+R FSS VVKDLKYADSHEW K DGNSATVGITDHAQDHLGDVV
Sbjct: 5   QLWASRAASYLRISVFNRAFSS-VVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVV 63

Query: 231 YVELPEVGASVTQGNSFGAVESVKATSDINSPVSGKVTEVNEELNSSPGLINSSPYEKGW 410
           YVELPEVG  VTQG  FGAVESVKATSDINSPVSGKV EVNEELNSSP  +NSSPYE GW
Sbjct: 64  YVELPEVGTEVTQGGGFGAVESVKATSDINSPVSGKVVEVNEELNSSPAKVNSSPYEDGW 123

Query: 411 IIKVELSNADEVNSLMDSEQYSKFCEKEDSEH 506
           IIKVELS++ E+++LMDSEQYSKFCE+EDS+H
Sbjct: 124 IIKVELSDSSELSNLMDSEQYSKFCEEEDSKH 155


>ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|296087512|emb|CBI34101.3| unnamed protein
           product [Vitis vinifera]
          Length = 155

 Score =  246 bits (628), Expect = 3e-63
 Identities = 125/156 (80%), Positives = 138/156 (88%), Gaps = 1/156 (0%)
 Frame = +3

Query: 42  MASKLL-ASRFASHFRVSVFHRGFSSSVVKDLKYADSHEWFKADGNSATVGITDHAQDHL 218
           MA  LL A+R AS+ R+SV  R FSS VVKDLKY DSHEW K DGN AT+GITDHAQDHL
Sbjct: 1   MAGGLLWATRAASYLRISVPFRAFSS-VVKDLKYVDSHEWAKVDGNLATIGITDHAQDHL 59

Query: 219 GDVVYVELPEVGASVTQGNSFGAVESVKATSDINSPVSGKVTEVNEELNSSPGLINSSPY 398
           GDVVYVELPEVGA+V+QG SFGAVESVKATSDINSPVSGKV EVNEEL+SSPGL+N SPY
Sbjct: 60  GDVVYVELPEVGANVSQGGSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLVNGSPY 119

Query: 399 EKGWIIKVELSNADEVNSLMDSEQYSKFCEKEDSEH 506
           EKGWIIKVE+SN  E+NSLMDSEQYSKFCE+ED++H
Sbjct: 120 EKGWIIKVEISNPSELNSLMDSEQYSKFCEEEDAKH 155


>ref|NP_181057.1| glycine cleavage system H protein [Arabidopsis thaliana]
           gi|3668097|gb|AAC61829.1| glycine decarboxylase complex
           H-protein [Arabidopsis thaliana]
           gi|15810184|gb|AAL06993.1| At2g35120/T4C15.21
           [Arabidopsis thaliana] gi|16974361|gb|AAL31106.1|
           At2g35120/T4C15.21 [Arabidopsis thaliana]
           gi|110743799|dbj|BAE99735.1| glycine decarboxylase
           complex H-protein [Arabidopsis thaliana]
           gi|330253973|gb|AEC09067.1| glycine cleavage system H
           protein [Arabidopsis thaliana]
          Length = 156

 Score =  246 bits (627), Expect = 4e-63
 Identities = 122/156 (78%), Positives = 135/156 (86%), Gaps = 1/156 (0%)
 Frame = +3

Query: 42  MASKLL-ASRFASHFRVSVFHRGFSSSVVKDLKYADSHEWFKADGNSATVGITDHAQDHL 218
           MA +L  ASR ASH R+SV  RGFSS V+KDLKYADSHEW K DGN AT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 219 GDVVYVELPEVGASVTQGNSFGAVESVKATSDINSPVSGKVTEVNEELNSSPGLINSSPY 398
           GDVVYVELP+VG SV+QG SFGAVESVKATSDINSPVSGKV EVNEEL  SPGL+NSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 399 EKGWIIKVELSNADEVNSLMDSEQYSKFCEKEDSEH 506
           E+GWIIKVELS+A E   LMDS++YSKFCE+ED++H
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156


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