BLASTX nr result

ID: Cimicifuga21_contig00007763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007763
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP21690.1| SFB31, partial [Prunus mume]                            67   2e-09
dbj|BAC81149.1| S-locus F-Box protein 6 [Prunus avium]                 65   4e-09
gb|ABW71900.1| S-locus F-box protein [Prunus avium]                    65   4e-09
gb|AAX19996.1| S-locus F-box protein [Prunus avium]                    65   4e-09
gb|AAX19998.1| S-locus F-box protein [Prunus avium]                    65   6e-09

>gb|AFP21690.1| SFB31, partial [Prunus mume]
          Length = 323

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
 Frame = -1

Query: 293 RFKSVCKSWRSVIESSRFITHHLKGNGNHH-----LIVSNPNQSTN-----------LCF 162
           RF   CKSW  +I SS F++ HL  N   H     L + +PN   N             +
Sbjct: 2   RFLFTCKSWSDLIGSSNFVSTHLHKNVTKHTHVYLLCLHHPNFERNDDPDDPYVEQEFQW 61

Query: 161 SLLSGNNFQVCENFDLPHP-GKLRHGEIIASCNGIICLD---LNFNSDVSLWNPATK 3
           SL S   F+ C  F+L HP G   H  I  S NG++CL    LNF+S + +WNP+ K
Sbjct: 62  SLFSNETFEEC--FNLSHPLGSTGHNWIYGSSNGLVCLSDEILNFDSPIHVWNPSVK 116


>dbj|BAC81149.1| S-locus F-Box protein 6 [Prunus avium]
          Length = 375

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
 Frame = -1

Query: 293 RFKSVCKSWRSVIESSRFITHHLKGNGNHH-----LIVSNPNQSTN-----------LCF 162
           RF   CKSW  +I SS FI+ HL  N   H     L + +PN   N             +
Sbjct: 25  RFLCTCKSWIDLIGSSSFISTHLHRNATKHTHVYLLCLHHPNFERNDDPDDPYVEQEFQW 84

Query: 161 SLLSGNNFQVCENFDLPHP-GKLRHGEIIASCNGIICLD---LNFNSDVSLWNPATK 3
           SL S   F+ C    L HP G  +H  I  S NG++C+    LNF+S + +WNP+ K
Sbjct: 85  SLFSNETFEECSK--LSHPSGSTKHYVIYGSSNGLVCISEEILNFDSPIHIWNPSVK 139


>gb|ABW71900.1| S-locus F-box protein [Prunus avium]
          Length = 362

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
 Frame = -1

Query: 293 RFKSVCKSWRSVIESSRFITHHLKGNGNHH-----LIVSNPNQSTN-----------LCF 162
           RF   CKSW  +I SS FI+ HL  N   H     L + +PN   N             +
Sbjct: 25  RFLCTCKSWIDLIGSSSFISTHLHRNATKHTHVYLLCLHHPNFERNDDPDDPYVEQEFQW 84

Query: 161 SLLSGNNFQVCENFDLPHP-GKLRHGEIIASCNGIICLD---LNFNSDVSLWNPATK 3
           SL S   F+ C    L HP G  +H  I  S NG++C+    LNF+S + +WNP+ K
Sbjct: 85  SLFSNETFEECSK--LSHPSGSTKHYVIYGSSNGLVCISEEILNFDSPIHIWNPSVK 139


>gb|AAX19996.1| S-locus F-box protein [Prunus avium]
          Length = 365

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
 Frame = -1

Query: 293 RFKSVCKSWRSVIESSRFITHHLKGNGNHH-----LIVSNPNQSTN-----------LCF 162
           RF   CKSW  +I SS FI+ HL  N   H     L + +PN   N             +
Sbjct: 25  RFLCTCKSWIDLIGSSSFISTHLHRNATKHTHVYLLCLHHPNFERNDDPDDPYVEQEFQW 84

Query: 161 SLLSGNNFQVCENFDLPHP-GKLRHGEIIASCNGIICLD---LNFNSDVSLWNPATK 3
           SL S   F+ C    L HP G  +H  I  S NG++C+    LNF+S + +WNP+ K
Sbjct: 85  SLFSNETFEECSK--LSHPSGSTKHYVIYGSSNGLVCISEEILNFDSPIHIWNPSVK 139


>gb|AAX19998.1| S-locus F-box protein [Prunus avium]
          Length = 366

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
 Frame = -1

Query: 293 RFKSVCKSWRSVIESSRFITHHLKGNGNHH-----LIVSNPNQSTN-----------LCF 162
           RF   CKSW  +I SSRF++ HL  N   H     L + +PN   N             +
Sbjct: 25  RFLCTCKSWTDLIGSSRFVSTHLHRNVTKHAHVYLLCLHHPNFERNEDPDDPYVEQEFQW 84

Query: 161 SLLSGNNFQVCENFDLPHP-GKLRHGEIIASCNGIICLD---LNFNSDVSLWNPATK 3
           SL S   F+ C N  L HP G   H  I  S N ++C+    LNF+S + +WNP+ +
Sbjct: 85  SLFSNETFEECSN--LSHPLGSTEHYVIYGSSNSLVCISDEILNFDSPIHIWNPSVR 139


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