BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007723
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32617.3| unnamed protein product [Vitis vinifera]              320   6e-85
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   318   1e-84
ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   315   1e-83
ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   306   9e-81
ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   305   2e-80

>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  320 bits (819), Expect = 6e-85
 Identities = 170/256 (66%), Positives = 196/256 (76%), Gaps = 7/256 (2%)
 Frame = +2

Query: 176 RTLKEMGSRAELTSKKRKRGGDVTSNEK-------CLKSDPDILSILKKLTDSHRSTTST 334
           R L    S   +  KK++R  D + +++        LKSD  IL  LK L  S  S  +T
Sbjct: 33  RPLPPSRSEEFMADKKKRRRTDPSDSDQQHLPFRNSLKSDEIILQTLKDLCSSSSSDGAT 92

Query: 335 HKALTLNDLGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRGNANQL 514
              LTL+DLGL+STC+EVADL L+SVQ  IE ++ R+T SIL+G GFSF VP+R +ANQL
Sbjct: 93  G-TLTLSDLGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQL 151

Query: 515 YVPELDRIVLKDKTSTRPYANVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKL 694
           YVPELDRIVLKDK+S RP+ANVSTVRK+A+TTRILQL+HQLCTK+IHVTKRDLFYTDVKL
Sbjct: 152 YVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKL 211

Query: 695 FXXXXXXXXXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 874
           F              CMLGCTRSSLNV+ASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI
Sbjct: 212 FQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 271

Query: 875 PPNIDRVGDVQSDALF 922
           PPNIDRVGD+QSDALF
Sbjct: 272 PPNIDRVGDMQSDALF 287



 Score =  112 bits (281), Expect = 1e-22
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +3

Query: 1056 QPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1223
            QPDVATRLFL+KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 319  QPDVATRLFLRKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 374


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  318 bits (816), Expect = 1e-84
 Identities = 167/245 (68%), Positives = 193/245 (78%), Gaps = 7/245 (2%)
 Frame = +2

Query: 209 LTSKKRKRGGDVTSNEK-------CLKSDPDILSILKKLTDSHRSTTSTHKALTLNDLGL 367
           +  KK++R  D + +++        LKSD  IL  LK L  S  S  +T   LTL+DLGL
Sbjct: 1   MADKKKRRRTDPSDSDQQHLPFRNSLKSDEIILQTLKDLCSSSSSDGATG-TLTLSDLGL 59

Query: 368 SSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRGNANQLYVPELDRIVLK 547
           +STC+EVADL L+SVQ  IE ++ R+T SIL+G GFSF VP+R +ANQLYVPELDRIVLK
Sbjct: 60  ASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLK 119

Query: 548 DKTSTRPYANVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXXXXX 727
           DK+S RP+ANVSTVRK+A+TTRILQL+HQLCTK+IHVTKRDLFYTDVKLF          
Sbjct: 120 DKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVL 179

Query: 728 XXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDVQ 907
               CMLGCTRSSLNV+ASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD+Q
Sbjct: 180 DDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 239

Query: 908 SDALF 922
           SDALF
Sbjct: 240 SDALF 244



 Score =  112 bits (281), Expect = 1e-22
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +3

Query: 1056 QPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1223
            QPDVATRLFL+KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 276  QPDVATRLFLRKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 331


>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
           gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
           topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  315 bits (808), Expect = 1e-83
 Identities = 160/245 (65%), Positives = 196/245 (80%), Gaps = 7/245 (2%)
 Frame = +2

Query: 209 LTSKKRKRGGDVTSNEKC-------LKSDPDILSILKKLTDSHRSTTSTHKALTLNDLGL 367
           +  K+++R  ++ S ++        LK D  IL ILK+L+D+  +++S+  + TL+DLGL
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSS-SSKTLDDLGL 59

Query: 368 SSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRGNANQLYVPELDRIVLK 547
           SS+C+EV DL L+SVQ  IE ++ +I +SIL+GNGF+F+VP+R  ANQLYVPELDRIVLK
Sbjct: 60  SSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLK 119

Query: 548 DKTSTRPYANVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXXXXX 727
           DKT+ RPYAN+STVRK+ ITTRILQLVHQLC K+IHVTKRDLFYTDVKLF          
Sbjct: 120 DKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVL 179

Query: 728 XXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDVQ 907
               C+LGCTRSSLNV+A+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD+Q
Sbjct: 180 DDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 239

Query: 908 SDALF 922
           SDALF
Sbjct: 240 SDALF 244



 Score =  110 bits (275), Expect = 7e-22
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +3

Query: 1056 QPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1223
            QPDVATRLFL+KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 276  QPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 331


>ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 419

 Score =  306 bits (783), Expect = 9e-81
 Identities = 161/240 (67%), Positives = 184/240 (76%), Gaps = 4/240 (1%)
 Frame = +2

Query: 215 SKKRKR---GGDVTSNEKCLKSDPDILSILKKLT-DSHRSTTSTHKALTLNDLGLSSTCK 382
           +KKR+R    GD    +  LK D  I+  LK+ +  S  S+ S  + LTL DL L   C+
Sbjct: 4   NKKRRRKDPAGDELPFKNKLKPDSAIMETLKQFSASSSSSSASVSQTLTLQDLSLPFRCR 63

Query: 383 EVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRGNANQLYVPELDRIVLKDKTST 562
           EVADL L+SVQ  IE ++ RI  SIL+G+GFSF+VP+R  ANQLYVPELDRIVLKDK+S 
Sbjct: 64  EVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRIVLKDKSSL 123

Query: 563 RPYANVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXXXXXXXXXC 742
           RP+AN+STVRK+AIT RILQL+HQLC K IHVTKRDLFYTDVKLF              C
Sbjct: 124 RPFANISTVRKSAITARILQLIHQLCLKGIHVTKRDLFYTDVKLFQDQIQSDAVLDDVSC 183

Query: 743 MLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDVQSDALF 922
           MLGCTRSSLNVVA+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD+QSDALF
Sbjct: 184 MLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALF 243



 Score =  109 bits (272), Expect = 2e-21
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = +3

Query: 1056 QPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1223
            QPDV+TRLFL+KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 275  QPDVSTRLFLRKMKIELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 330


>ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 417

 Score =  305 bits (781), Expect = 2e-80
 Identities = 160/239 (66%), Positives = 185/239 (77%), Gaps = 3/239 (1%)
 Frame = +2

Query: 215 SKKRKR---GGDVTSNEKCLKSDPDILSILKKLTDSHRSTTSTHKALTLNDLGLSSTCKE 385
           +KKR+R    GD    +  LK D  I+  LK+ + S  S++S  + LTL DL +   C+E
Sbjct: 4   NKKRRRKDPAGDELPFKNKLKPDSAIMETLKQFSASS-SSSSVSQTLTLQDLSIPFRCRE 62

Query: 386 VADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRGNANQLYVPELDRIVLKDKTSTR 565
           VADL L+SVQ  IE ++ RI  SIL+G+GFSF+VP+R  ANQLYVPELDRIVLKDK+S R
Sbjct: 63  VADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRIVLKDKSSLR 122

Query: 566 PYANVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXXXXXXXXXCM 745
           P+AN+STVRK+AIT RILQL+HQLC K IHVTKRDLFYTDVKLF              CM
Sbjct: 123 PFANISTVRKSAITARILQLIHQLCIKGIHVTKRDLFYTDVKLFQDQIQSDAVLDDVSCM 182

Query: 746 LGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDVQSDALF 922
           LGCTRSSLNVVA+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD+QSDALF
Sbjct: 183 LGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALF 241



 Score =  111 bits (278), Expect = 3e-22
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = +3

Query: 1056 QPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1223
            QPDV+TRLFL+KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 273  QPDVSTRLFLRKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 328