BLASTX nr result

ID: Cimicifuga21_contig00007720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007720
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522498.1| Auxin response factor, putative [Ricinus com...   115   3e-24
ref|XP_002331957.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
gb|ADL36577.1| ARF domain class transcription factor [Malus x do...   112   3e-23
ref|XP_002305105.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...   111   5e-23

>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
           gi|223538189|gb|EEF39798.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 730

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -3

Query: 199 VCLELWHACAGPLISLPKKGNAVVYLPQGHLEQISEIPISNFYDLPSHVFCRVVDVKLHA 20
           VCLELWHACAGPLISLPKKG+ VVY PQGHLEQ+ ++P++  YDLPS++FCRVVDVKLHA
Sbjct: 50  VCLELWHACAGPLISLPKKGSVVVYFPQGHLEQLPDLPLA-VYDLPSYIFCRVVDVKLHA 108

Query: 19  ELANDE 2
           E ANDE
Sbjct: 109 ETANDE 114


>ref|XP_002331957.1| predicted protein [Populus trichocarpa] gi|222874734|gb|EEF11865.1|
           predicted protein [Populus trichocarpa]
          Length = 714

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -3

Query: 199 VCLELWHACAGPLISLPKKGNAVVYLPQGHLEQISEIPISNFYDLPSHVFCRVVDVKLHA 20
           VCLELWHACAGPLISLPK+G+ VVY PQGHLEQ+ ++P++  YDLPSHVFCRVVDVKLHA
Sbjct: 46  VCLELWHACAGPLISLPKRGSVVVYFPQGHLEQLPDLPLA-VYDLPSHVFCRVVDVKLHA 104

Query: 19  ELANDE 2
           E A+DE
Sbjct: 105 EAASDE 110


>gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
          Length = 712

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/66 (78%), Positives = 56/66 (84%)
 Frame = -3

Query: 199 VCLELWHACAGPLISLPKKGNAVVYLPQGHLEQISEIPISNFYDLPSHVFCRVVDVKLHA 20
           VCLELWHACAGPLISLPKKG  VVYLPQGHLEQ+S+ P S  YDLP H+FCRVVDVKLHA
Sbjct: 38  VCLELWHACAGPLISLPKKGTVVVYLPQGHLEQVSDFPTS-AYDLPPHLFCRVVDVKLHA 96

Query: 19  ELANDE 2
           E   D+
Sbjct: 97  ESGTDD 102


>ref|XP_002305105.1| predicted protein [Populus trichocarpa] gi|222848069|gb|EEE85616.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/66 (75%), Positives = 59/66 (89%)
 Frame = -3

Query: 199 VCLELWHACAGPLISLPKKGNAVVYLPQGHLEQISEIPISNFYDLPSHVFCRVVDVKLHA 20
           VCLELWHACAGPLISLPK+G+ VVY+PQGHLEQ+ ++P+   YDLP HVFCRVVDVKLHA
Sbjct: 46  VCLELWHACAGPLISLPKRGSIVVYVPQGHLEQLPDLPL-GIYDLPPHVFCRVVDVKLHA 104

Query: 19  ELANDE 2
           E A+D+
Sbjct: 105 EAASDD 110


>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/66 (78%), Positives = 57/66 (86%)
 Frame = -3

Query: 199 VCLELWHACAGPLISLPKKGNAVVYLPQGHLEQISEIPISNFYDLPSHVFCRVVDVKLHA 20
           VCLELWHACAGPLISLPKKG+ VVY PQGHLEQ+S+ P +  YDLP HVFCRVVDVKLHA
Sbjct: 46  VCLELWHACAGPLISLPKKGSLVVYFPQGHLEQLSDYP-AVAYDLPPHVFCRVVDVKLHA 104

Query: 19  ELANDE 2
           E+  DE
Sbjct: 105 EVVTDE 110


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