BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007704
         (2103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   686   0.0  
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   657   0.0  
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   650   0.0  
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              624   e-176
ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca...   614   e-173

>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  686 bits (1769), Expect = 0.0
 Identities = 376/618 (60%), Positives = 448/618 (72%), Gaps = 19/618 (3%)
 Frame = +1

Query: 262  MEVAVQADSPSIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKDYGE 441
            ME A Q++SP+I+ INK  VHRICSGQVILDLSSAVKELVENSLDAGATSIEIALK+YG+
Sbjct: 1    MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60

Query: 442  ESFKVTDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGNLTVE 621
            E F+V DNGCGISPNNFKVLALKHHTSK+ DFPDLQSLTTFGFRGEALSSLCALGNLTVE
Sbjct: 61   EWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVE 120

Query: 622  TRTKNEPMATHLTFDHSGILTCERNTARQIGTTVTVEKLFSSLPVRSKEFSRNIRKEYGK 801
            TRTKNE +ATHLTFDHSG+L  E+ TARQIGTTVTV+KLFS+LPVRSKEFSRNIRKEYGK
Sbjct: 121  TRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK 180

Query: 802  LISLLNAYALIAKGVRFVCTNTAGKNTKSVVLKTQGSSSIKDNIITVFGTNTFSCLEPLS 981
            LISLL+AYALIA GVR VCTNT GKN KS+VLKTQGS S+KDNIITVFG NTF+CLEPL+
Sbjct: 181  LISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLN 240

Query: 982  ICISENCIVEGFISKPGYGSGRNLGDRQFYFVNGRPVDMPKLTKLVNELYKSANSRQYPI 1161
            IC+S++  V+GF+SK GYGSGR LGDRQF+FVNGRPVDMPK+ KLVNELYK ANSRQYPI
Sbjct: 241  ICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPI 300

Query: 1162 AIMNFTVPTRAYDVNVTPDKRKIFFSDEGSLMKSLREAIENIYSPSHCSYSANKFEKPKK 1341
            AIMNFTVPTRAYDVNVTPDKRKIFFSDEGS++ SLRE +E IYSPS  SYS N+FE+P +
Sbjct: 301  AIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTE 360

Query: 1342 ENGSSELYICPKEL---GAPLSPEGYVNKVEESSGKQATKKQIEEDGTPHMIVKARLRDE 1512
            E  +SEL     ++      L P+G   + E  S     ++QI ED  P  +VK+   + 
Sbjct: 361  ETDNSELNPPQTQILSSSKQLFPDGSDLQEEAHS-----EEQITEDQIPSKMVKSSTENM 415

Query: 1513 CVIEGAVNKVDENPTRKDFSLKAHTIGKLDASFAYTKQLKTPTPSTEK-DVYARSPSTAA 1689
              ++   +  D++   KDFSL+ H I K D+   +  +  T T +++  D    S S   
Sbjct: 416  HAVKEMDHSYDKDSIEKDFSLRVHGIKKADSFPKWDSEKTTMTINSDTIDHQVLSLSEMV 475

Query: 1690 SKDAI---------KYVH------XXXXXXXXXXXLTKFVSVNKRKHENSCTVLSEVPVL 1824
             K A+          Y+                  L+KFV+VNKRKHEN  TVLSE P+L
Sbjct: 476  VKGAVGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHENISTVLSEAPLL 535

Query: 1825 RNESVCFQTKKISSDVHTEVSRSLVVHNQINGCSDVNGGETSKYSREDHVSNEVETPLSP 2004
            RN++   Q KK +S++H  VSRS V H + N  + +   E SK+   D   +  E P   
Sbjct: 536  RNQTPNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYS 595

Query: 2005 GSDTVNGGFGEENSEYHK 2058
            G + +N     E+ E H+
Sbjct: 596  GGN-INDEKAGEDLENHE 612


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  657 bits (1694), Expect = 0.0
 Identities = 357/608 (58%), Positives = 440/608 (72%), Gaps = 1/608 (0%)
 Frame = +1

Query: 280  ADSPSIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEESFKVT 459
            ++SP IKPINK VVHRIC+GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGE+SF+V 
Sbjct: 4    SNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVI 63

Query: 460  DNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNE 639
            DNGCG+SPNNFKVLALKHHTSK+ADFPDLQSLTTFGFRGEALSSLCALG LTVETRTKNE
Sbjct: 64   DNGCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKNE 123

Query: 640  PMATHLTFDHSGILTCERNTARQIGTTVTVEKLFSSLPVRSKEFSRNIRKEYGKLISLLN 819
             +ATHL++D SG+LT E+ TARQIGTTVTV+KLFS+LPVRSKEFSRNIRKEYGKLISLLN
Sbjct: 124  SVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLN 183

Query: 820  AYALIAKGVRFVCTNTAGKNTKSVVLKTQGSSSIKDNIITVFGTNTFSCLEPLSICISEN 999
            AYALIAKGVR +CTNT G+N K VVLKTQG+ S+KDNIITVFG +TFSCLEP+SICIS+ 
Sbjct: 184  AYALIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICISDC 243

Query: 1000 CIVEGFISKPGYGSGRNLGDRQFYFVNGRPVDMPKLTKLVNELYKSANSRQYPIAIMNFT 1179
            C V+GF+SKPG GSGRNLGDRQ+YFVNGRPVDMPK+TKLVNELY+ ANSRQYPIAIMNF 
Sbjct: 244  CKVDGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNFI 303

Query: 1180 VPTRAYDVNVTPDKRKIFFSDEGSLMKSLREAIENIYSPSHCSYSANKFEKPKKENGSSE 1359
            VPTRA DVNVTPDKRKIFFSDE S++ +LRE ++NIYSPS+ SYS NKFE+  K   +S+
Sbjct: 304  VPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQ 363

Query: 1360 LYICPKELGAPLSPEGYVNKVEESSGKQATKKQIEEDGTPHMIVKARLRDECVIEGAVNK 1539
                P E    LS +  ++ V   + +   ++   +       VK +     V E     
Sbjct: 364  -SCSPHEKSLVLSKQ--LSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHPSNVGENR--- 417

Query: 1540 VDENPTRKDFSLKAHTIGKLDASFAYTKQLKTPTPSTEKDVYARSPSTAASKDAIKYVHX 1719
             DE    KDF+L+ H I K+ +      +  T    T  D    SPS   +K+  +    
Sbjct: 418  -DEKRISKDFTLRVHDIPKVYSFPNSNNRQLTTLHDTLTDQNTPSPSRVVAKNIAESRGS 476

Query: 1720 XXXXXXXXXXLTKFVSVNKRKHEN-SCTVLSEVPVLRNESVCFQTKKISSDVHTEVSRSL 1896
                      ++KFV+V+KRKH++ S T LSE+P+LRN+++     K +S+V+  V+ S 
Sbjct: 477  NSSSRSVQSTISKFVTVSKRKHDDISTTTLSEIPILRNQTLQRPLNKSNSEVNAAVTGSP 536

Query: 1897 VVHNQINGCSDVNGGETSKYSREDHVSNEVETPLSPGSDTVNGGFGEENSEYHKKSTLLV 2076
              H+ I+   +V+  E SK+   + + ++V    S    T N G  +++SE  +K + + 
Sbjct: 537  FNHHHIDDSLEVSDIEVSKFPTAEKIFSKVRNSASYRGHT-NDGKPKDDSEGAEKLSFIA 595

Query: 2077 GGVSDALP 2100
                D  P
Sbjct: 596  DVAPDTSP 603


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  650 bits (1678), Expect = 0.0
 Identities = 351/592 (59%), Positives = 425/592 (71%), Gaps = 1/592 (0%)
 Frame = +1

Query: 274  VQADSPSIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEESFK 453
            +++ + +I+PINK+ VHRIC+GQVILDLSSAVKELVENSLDAGATSIEI+LKDYG ESF+
Sbjct: 1    MESSAITIRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQ 60

Query: 454  VTDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGNLTVETRTK 633
            V DNGCG+SPNNFKVLALKHHTSK+ DF DLQSLTTFGFRGEALSSLC LG+LTVETRTK
Sbjct: 61   VIDNGCGVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTK 120

Query: 634  NEPMATHLTFDHSGILTCERNTARQIGTTVTVEKLFSSLPVRSKEFSRNIRKEYGKLISL 813
            NEP+ATHLTF+HSG+LT ER TARQ+GTTVTV+KLFSSLPVRSKEFSRNIRKEYGKLISL
Sbjct: 121  NEPVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISL 180

Query: 814  LNAYALIAKGVRFVCTNTAGKNTKSVVLKTQGSSSIKDNIITVFGTNTFSCLEPLSICIS 993
            LNAYALI+KGVR VC+NT GKN KSVVLKTQGS S+KDNIITVFG NTFSCLEP+ I IS
Sbjct: 181  LNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDIS 240

Query: 994  ENCIVEGFISKPGYGSGRNLGDRQFYFVNGRPVDMPKLTKLVNELYKSANSRQYPIAIMN 1173
             +C VEGF+SK G GSGRNLGDRQ+YFVNGRPVDMPK++KLVNELYK ANSRQYPIAIMN
Sbjct: 241  GSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIMN 300

Query: 1174 FTVPTRAYDVNVTPDKRKIFFSDEGSLMKSLREAIENIYSPSHCSYSANKFEKPKKENGS 1353
            FT+PT A DVNVTPDKRKIFFSDE S++ +LRE +E  YS S+  YS NKFE   K   S
Sbjct: 301  FTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHAKAADS 360

Query: 1354 SELYICPKELGAPLSPEGYVNKVEESSGKQATKKQIE-EDGTPHMIVKARLRDECVIEGA 1530
            S+L        +P      ++K   ++G  + + Q + ED +P M V+ + +   V E +
Sbjct: 361  SQLC-------SPREKSNMLSKQSSANGNDSEETQTDAEDSSPLMTVEVKSKPFQVGERS 413

Query: 1531 VNKVDENPTRKDFSLKAHTIGKLDASFAYTKQLKTPTPSTEKDVYARSPSTAASKDAIKY 1710
            ++ ++E    KDF+L+ H I K D+         T   +   D  A+ PS    +  +K 
Sbjct: 414  IHDIEEKFMMKDFALRLHGIKKTDSLTNSNSCKATTHLNIVTDQNAQCPSRVVER--VK- 470

Query: 1711 VHXXXXXXXXXXXLTKFVSVNKRKHENSCTVLSEVPVLRNESVCFQTKKISSDVHTEVSR 1890
                         L+ F++VNKRK E+  T LSEVPVLRN++   Q KK   D+H  V+ 
Sbjct: 471  GDSNGPSGSFQSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSECQLKKSDIDIHDAVTS 530

Query: 1891 SLVVHNQINGCSDVNGGETSKYSREDHVSNEVETPLSPGSDTVNGGFGEENS 2046
             L  H+ I+  ++    E  K+   D + N+                GE+NS
Sbjct: 531  LLFNHHHIDDSTEFTDAEPPKHHSTDVIINKTRNNSGLQPKLAEDPSGEQNS 582


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  624 bits (1609), Expect = e-176
 Identities = 321/444 (72%), Positives = 368/444 (82%), Gaps = 3/444 (0%)
 Frame = +1

Query: 262  MEVAVQADSPSIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKDYGE 441
            ME A Q++SP+I+ INK  VHRICSGQVILDLSSAVKELVENSLDAGATSIEIALK+YG+
Sbjct: 1    MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60

Query: 442  ESFKVTDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGNLTVE 621
            E F+V DNGCGISPNNFKVLALKHHTSK+ DFPDLQSLTTFGFRGEALSSLCALGNLTVE
Sbjct: 61   EWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVE 120

Query: 622  TRTKNEPMATHLTFDHSGILTCERNTARQIGTTVTVEKLFSSLPVRSKEFSRNIRKEYGK 801
            TRTKNE +ATHLTFDHSG+L  E+ TARQIGTTVTV+KLFS+LPVRSKEFSRNIRKEYGK
Sbjct: 121  TRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK 180

Query: 802  LISLLNAYALIAKGVRFVCTNTAGKNTKSVVLKTQGSSSIKDNIITVFGTNTFSCLEPLS 981
            LISLL+AYALIA GVR VCTNT GKN KS+VLKTQGS S+KDNIITVFG NTF+CLEPL+
Sbjct: 181  LISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLN 240

Query: 982  ICISENCIVEGFISKPGYGSGRNLGDRQFYFVNGRPVDMPKLTKLVNELYKSANSRQYPI 1161
            IC+S++  V+GF+SK GYGSGR LGDRQF+FVNGRPVDMPK+ KLVNELYK ANSRQYPI
Sbjct: 241  ICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPI 300

Query: 1162 AIMNFTVPTRAYDVNVTPDKRKIFFSDEGSLMKSLREAIENIYSPSHCSYSANKFEKPKK 1341
            AIMNFTVPTRAYDVNVTPDKRKIFFSDEGS++ SLRE +E IYSPS  SYS N+FE+P +
Sbjct: 301  AIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTE 360

Query: 1342 ENGSSELYICPKEL---GAPLSPEGYVNKVEESSGKQATKKQIEEDGTPHMIVKARLRDE 1512
            E  +SEL     ++      L P+G   + E  S     ++QI ED  P  +VK+   + 
Sbjct: 361  ETDNSELNPPQTQILSSSKQLFPDGSDLQEEAHS-----EEQITEDQIPSKMVKSSTENM 415

Query: 1513 CVIEGAVNKVDENPTRKDFSLKAH 1584
              ++   +  D++   KDFSL+ H
Sbjct: 416  HAVKEMDHSYDKDSIEKDFSLRVH 439


>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
            gi|355480599|gb|AES61802.1| DNA mismatch repair protein
            [Medicago truncatula]
          Length = 933

 Score =  614 bits (1583), Expect = e-173
 Identities = 339/634 (53%), Positives = 431/634 (67%), Gaps = 28/634 (4%)
 Frame = +1

Query: 283  DSPSIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEESFKVTD 462
            +S  IKPI K +VHRICSGQVILDLSSAVKELVENSLDAGATSIEI+LKD+GEE F+V D
Sbjct: 4    ESQIIKPIAKGIVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEEWFQVID 63

Query: 463  NGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNEP 642
            NGCGISPN+FKVL LKHHTSK+++F DLQSLTTFGFRGEALSSLCALGNLT+ETRT NEP
Sbjct: 64   NGCGISPNSFKVLGLKHHTSKLSEFHDLQSLTTFGFRGEALSSLCALGNLTIETRTVNEP 123

Query: 643  MATHLTFDHSGILTCERNTARQIGTTVTVEKLFSSLPVRSKEFSRNIRKEYGKLISLLNA 822
            +ATHLTF+HSG+L  E+  ARQIGTTVTV+KLFSSLPVRSKEF RNIRKEYGKL SLLNA
Sbjct: 124  VATHLTFNHSGVLVAEKKIARQIGTTVTVKKLFSSLPVRSKEFKRNIRKEYGKLASLLNA 183

Query: 823  YALIAKGVRFVCTNTAGKNTKSVVLKTQGSSSIKDNIITVFGTNTFSCLEPLSICISENC 1002
            YALIAKGVRF CTNT GKN KSVVLKTQG+ S+KDNIITV G NTF+CLEP+S+CISE+C
Sbjct: 184  YALIAKGVRFGCTNTTGKNVKSVVLKTQGNDSLKDNIITVLGMNTFNCLEPMSLCISESC 243

Query: 1003 IVEGFISKPGYGSGRNLGDRQFYFVNGRPVDMPKLTKLVNELYKSANSRQYPIAIMNFTV 1182
             V+GF+SKPG G+GRNLGDRQ++FVNGRPVDMPK+ KLVNELY+SANS+QYPIAIMNFTV
Sbjct: 244  KVDGFLSKPGLGNGRNLGDRQYFFVNGRPVDMPKIGKLVNELYRSANSKQYPIAIMNFTV 303

Query: 1183 PTRAYDVNVTPDKRKIFFSDEGSLMKSLREAIENIYSPSHCSYSANKFEKP--------- 1335
            PT+AYDVNVTPDKRKIFFS+E SL+++LRE ++ IYSP + SY+ N+F +P         
Sbjct: 304  PTKAYDVNVTPDKRKIFFSEETSLLQALREGLQQIYSPDNASYAVNEFMRPAAKEDCFEL 363

Query: 1336 KKENGSSELYICPKELGAPLSPEGY--------VNKVEESSGKQATKKQIEEDGTPHMIV 1491
            +     S +   P  L   +  E +        +++ + +S +      + E    H   
Sbjct: 364  RSSQKKSPIVTKPASLNVAIPQEEHYTEFNTASISRDKNNSDRNGGSISLNEHKEKHTTD 423

Query: 1492 KARLRDEC-------VIEGAVNKVDENPTRKDFSLKAHTIGKLDAS---FAYTK-QLKTP 1638
                 +         V EG + +       K+F+L+AH   K D S    A T   L+  
Sbjct: 424  SNNASESDDGDLFSHVEEGLIRESGGGLMGKEFTLRAHKTLKGDKSGRQMASTHIALRNQ 483

Query: 1639 TPSTEKDVYARSPSTAASKDAIKYVHXXXXXXXXXXXLTKFVSVNKRKHENSCTVLSEVP 1818
                 + V +   S   S D+ ++V            L  FV+V+KRK ++  T LSEVP
Sbjct: 484  ATLVSRTVESGGSSDKYSSDSSRHVQST---------LNNFVAVSKRKRDDIITALSEVP 534

Query: 1819 VLRNESVCFQTKKISSDVHTEVSRSLVVHNQINGCSDVNGGETSKYSREDHVSNEVETPL 1998
            VLRN++   + K ++++ +  ++RS +  +QIN  S  +  E  +    D +++     L
Sbjct: 535  VLRNQAPQCKLKTVNTETNDLITRSYLHLDQINETSTPSEIENLQQRNPDGINHSSVNSL 594

Query: 1999 SPGSDTVNGGFGEENSEYHKKSTLLVGGVSDALP 2100
            S   D+ +    E N + H+++   +   +   P
Sbjct: 595  SFIEDSTD---REPNMKPHQENKTHLADTASVTP 625