BLASTX nr result

ID: Cimicifuga21_contig00007697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007697
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532934.1| conserved hypothetical protein [Ricinus comm...   215   1e-53
ref|XP_002285129.1| PREDICTED: PRA1 family protein H-like [Vitis...   215   1e-53
emb|CBI20267.3| unnamed protein product [Vitis vinifera]              215   1e-53
ref|XP_002329116.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
gb|AFK37730.1| unknown [Medicago truncatula]                          207   2e-51

>ref|XP_002532934.1| conserved hypothetical protein [Ricinus communis]
           gi|223527298|gb|EEF29450.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  215 bits (548), Expect = 1e-53
 Identities = 103/164 (62%), Positives = 124/164 (75%)
 Frame = +3

Query: 90  YLTTLFSLFTINPFSKLTADDFSLQTPSWTVGFIGXXXXXXXXXXXXQTRLRVHENIKRY 269
           +  TL SLFT+NP SKLT DDFS QTPSWT  F G            Q RLRVHEN+KRY
Sbjct: 70  HFITLISLFTLNPLSKLTTDDFSGQTPSWTRVFFGDFGSYSFPSNADQARLRVHENVKRY 129

Query: 270 ARNYATLYLLFFACSLYQMPVALFGLIACLLFWELFKWCSEQWGLEQYPSVRQSLIRLAQ 449
           ARNYA+L++LFFAC+LYQMP+AL GLI+ L  W++ K+CS++WG EQYP +RQ LIR AQ
Sbjct: 130 ARNYASLFILFFACTLYQMPLALIGLISSLALWDVLKFCSDRWGWEQYPVIRQVLIRTAQ 189

Query: 450 CATAVILYWSSVQMALFCAIAVGYAVMVFHASLRKLSPLKQATR 581
           CATAVIL + +VQMALFCA+ V YAVM+ HA+ RKL+P KQ  R
Sbjct: 190 CATAVILIYLNVQMALFCALCVSYAVMILHAAFRKLTPAKQHPR 233


>ref|XP_002285129.1| PREDICTED: PRA1 family protein H-like [Vitis vinifera]
          Length = 233

 Score =  215 bits (547), Expect = 1e-53
 Identities = 100/165 (60%), Positives = 127/165 (76%)
 Frame = +3

Query: 90  YLTTLFSLFTINPFSKLTADDFSLQTPSWTVGFIGXXXXXXXXXXXXQTRLRVHENIKRY 269
           +L TL SLFT+NPFSKLT+DDFS  TPSWT+ F+G            Q RLRVHEN+KRY
Sbjct: 68  HLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYTFPSSSSQARLRVHENVKRY 127

Query: 270 ARNYATLYLLFFACSLYQMPVALFGLIACLLFWELFKWCSEQWGLEQYPSVRQSLIRLAQ 449
           ARNYATL+++ FAC+LYQMP+AL GLI+ L  W+L ++CS++W +++YP VRQ+LI   Q
Sbjct: 128 ARNYATLFIICFACTLYQMPIALVGLISSLALWDLLRFCSDKWRVDRYPVVRQALIHTVQ 187

Query: 450 CATAVILYWSSVQMALFCAIAVGYAVMVFHASLRKLSPLKQATRA 584
           CATAV+L+ S+VQ ALFCA+ V YAVM+ HAS RKL+P KQ T A
Sbjct: 188 CATAVVLFCSNVQFALFCALGVSYAVMILHASFRKLTPAKQPTPA 232


>emb|CBI20267.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  215 bits (547), Expect = 1e-53
 Identities = 100/165 (60%), Positives = 127/165 (76%)
 Frame = +3

Query: 90  YLTTLFSLFTINPFSKLTADDFSLQTPSWTVGFIGXXXXXXXXXXXXQTRLRVHENIKRY 269
           +L TL SLFT+NPFSKLT+DDFS  TPSWT+ F+G            Q RLRVHEN+KRY
Sbjct: 66  HLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYTFPSSSSQARLRVHENVKRY 125

Query: 270 ARNYATLYLLFFACSLYQMPVALFGLIACLLFWELFKWCSEQWGLEQYPSVRQSLIRLAQ 449
           ARNYATL+++ FAC+LYQMP+AL GLI+ L  W+L ++CS++W +++YP VRQ+LI   Q
Sbjct: 126 ARNYATLFIICFACTLYQMPIALVGLISSLALWDLLRFCSDKWRVDRYPVVRQALIHTVQ 185

Query: 450 CATAVILYWSSVQMALFCAIAVGYAVMVFHASLRKLSPLKQATRA 584
           CATAV+L+ S+VQ ALFCA+ V YAVM+ HAS RKL+P KQ T A
Sbjct: 186 CATAVVLFCSNVQFALFCALGVSYAVMILHASFRKLTPAKQPTPA 230


>ref|XP_002329116.1| predicted protein [Populus trichocarpa] gi|222869785|gb|EEF06916.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  208 bits (529), Expect = 2e-51
 Identities = 95/165 (57%), Positives = 124/165 (75%)
 Frame = +3

Query: 90  YLTTLFSLFTINPFSKLTADDFSLQTPSWTVGFIGXXXXXXXXXXXXQTRLRVHENIKRY 269
           ++ TL SLFT+NPFSKLT DDFS QTPSWT  F              Q RLRV+EN+KRY
Sbjct: 67  HILTLLSLFTLNPFSKLTTDDFSGQTPSWTRSFFADCGSYSFPSGSDQARLRVNENVKRY 126

Query: 270 ARNYATLYLLFFACSLYQMPVALFGLIACLLFWELFKWCSEQWGLEQYPSVRQSLIRLAQ 449
           ARNYA+L++LFFAC+LYQMP+AL GLI+ L  W++FK+CS++WG ++YP +RQ ++R AQ
Sbjct: 127 ARNYASLFILFFACTLYQMPLALIGLISSLALWDVFKFCSDRWGWDRYPVLRQVMVRTAQ 186

Query: 450 CATAVILYWSSVQMALFCAIAVGYAVMVFHASLRKLSPLKQATRA 584
           C TAV+L   +VQMA FCA+ + Y VMV HA+ RKL+P KQ+ R+
Sbjct: 187 CVTAVVLICLNVQMAFFCAVGISYTVMVLHAAFRKLTPAKQSARS 231


>gb|AFK37730.1| unknown [Medicago truncatula]
          Length = 229

 Score =  207 bits (528), Expect = 2e-51
 Identities = 96/166 (57%), Positives = 125/166 (75%)
 Frame = +3

Query: 93  LTTLFSLFTINPFSKLTADDFSLQTPSWTVGFIGXXXXXXXXXXXXQTRLRVHENIKRYA 272
           L TL S  T+NPF+KLTADDFS  TPSW+  F+G            Q R RVHEN+KRYA
Sbjct: 63  LLTLLSFLTLNPFAKLTADDFSADTPSWSRSFVGSSDSYSFPSSPSQARFRVHENVKRYA 122

Query: 273 RNYATLYLLFFACSLYQMPVALFGLIACLLFWELFKWCSEQWGLEQYPSVRQSLIRLAQC 452
           RNY+ L+++FFA +LY+MP+AL GLI+CL  W+ FK+ S++WGL+QYP +RQ L+R+AQC
Sbjct: 123 RNYSYLFIVFFASALYKMPLALVGLISCLALWDFFKFSSDKWGLDQYPVIRQCLLRIAQC 182

Query: 453 ATAVILYWSSVQMALFCAIAVGYAVMVFHASLRKLSPLKQATRADG 590
           ATAVIL +S+VQMALFCAI+V YA ++ HA+ RKL+P KQ +   G
Sbjct: 183 ATAVILIYSNVQMALFCAISVSYAGVILHAAFRKLTPAKQPSTVRG 228


Top