BLASTX nr result

ID: Cimicifuga21_contig00007596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007596
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532107.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
emb|CBI32803.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002283004.1| PREDICTED: mitotic-spindle organizing protei...    76   2e-12
ref|XP_003520913.1| PREDICTED: mitotic-spindle organizing protei...    73   2e-11
ref|XP_003516891.1| PREDICTED: mitotic-spindle organizing protei...    72   4e-11

>ref|XP_002532107.1| conserved hypothetical protein [Ricinus communis]
           gi|223528210|gb|EEF30269.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 74

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/57 (70%), Positives = 44/57 (77%)
 Frame = +1

Query: 1   RESLDLAFHMSNILDTGLDRQXXXXXXXXXDLGLNPEALAALVKELRQEASSTTAPP 171
           RESLDLAFHMSNILDTGLDR          DLGLNPEALAA+VKELRQ+ SS+ + P
Sbjct: 10  RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGLNPEALAAVVKELRQQPSSSPSIP 66


>emb|CBI32803.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 1   RESLDLAFHMSNILDTGLDRQXXXXXXXXXDLGLNPEALAALVKELRQEASSTTAPPLVP 180
           RESL+LAFHMSNILDTGLDR          DLGLNPEALAA+VKELR+E+ S++  P  P
Sbjct: 44  RESLELAFHMSNILDTGLDRHTLSVLITLCDLGLNPEALAAVVKELRRESCSSSPMPETP 103


>ref|XP_002283004.1| PREDICTED: mitotic-spindle organizing protein 1B-like [Vitis
           vinifera]
          Length = 73

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 1   RESLDLAFHMSNILDTGLDRQXXXXXXXXXDLGLNPEALAALVKELRQEASSTTAPPLVP 180
           RESL+LAFHMSNILDTGLDR          DLGLNPEALAA+VKELR+E+ S++  P  P
Sbjct: 10  RESLELAFHMSNILDTGLDRHTLSVLITLCDLGLNPEALAAVVKELRRESCSSSPMPETP 69


>ref|XP_003520913.1| PREDICTED: mitotic-spindle organizing protein 1B [Glycine max]
           gi|255633504|gb|ACU17110.1| unknown [Glycine max]
          Length = 73

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = +1

Query: 1   RESLDLAFHMSNILDTGLDRQXXXXXXXXXDLGLNPEALAALVKELRQEASS-TTAPPLV 177
           RESLDLAFHMSNILDTGLDR          DLG+NPEALAA+VKELR+E  S +++ P+ 
Sbjct: 10  RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEKPSLSSSLPVA 69

Query: 178 P 180
           P
Sbjct: 70  P 70


>ref|XP_003516891.1| PREDICTED: mitotic-spindle organizing protein 1B-like [Glycine max]
          Length = 74

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +1

Query: 1   RESLDLAFHMSNILDTGLDRQXXXXXXXXXDLGLNPEALAALVKELRQEASSTTA 165
           RESLDLAFHMSNILDTGLDR          DLG+NPEALAA+VKELR+E  S ++
Sbjct: 10  RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEKPSLSS 64


Top