BLASTX nr result
ID: Cimicifuga21_contig00007573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007573
(1926 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin... 617 e-174
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin... 604 e-170
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin... 566 e-159
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin... 546 e-153
ref|XP_003535073.1| PREDICTED: U3 small nucleolar RNA-interactin... 538 e-150
>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
[Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
protein product [Vitis vinifera]
Length = 519
Score = 617 bits (1591), Expect = e-174
Identities = 319/514 (62%), Positives = 381/514 (74%), Gaps = 6/514 (1%)
Frame = +2
Query: 113 SKKKLLNPRPAKKPRKLALEEDSFFLYDSKRKRKLXXXXXXXXXXXXXXXPPFSRFNKGX 292
SKKK+ + +K ++ +++EDSFF ++SKR+RK
Sbjct: 6 SKKKVSVSKGTRKGKRFSIDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDA 65
Query: 293 XXXXXXXXXXX----TVAEKRHRLTKEFVQRHREQADRLLXXXXXXXXXXXRAGRRDAIV 460
T EKR R+ K +V++ R R R G+RD++V
Sbjct: 66 DGLEERQEEDEFAAETADEKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRDSLV 125
Query: 461 AELLQKEQLEDSGRVRRLIASRVQKPETPDGFRLLVRHRQSVTAVALSEDDLKGFSASKD 640
A++LQ+EQLE+SGRVRRLIASRVQKPET D FR+LV+HRQSVTAVALSEDDLKGFSASKD
Sbjct: 126 AQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKD 185
Query: 641 GTIVQWDVENGKSEKYVWPTNGIMNSHGAKNPQNPSTKWSKHVLAIAVSTDGRLLATGGL 820
GTIVQWDV++GK EKY+WPT ++ SHGAK+PQ + K SKHVLA+AVS+DGR LA+GG
Sbjct: 186 GTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGF 245
Query: 821 DRHVHLWDTRTRQHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRKIKLWNAEDRAYVDTN 1000
DRHVHLWDTRTR+H++AFPGHRGPVSCLTFRQGTSELFSGSFDR IK+W+AEDRAY+ +
Sbjct: 246 DRHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSL 305
Query: 1001 VGHQAEVLTIDCLRKERVLTVGRDRTMRLWKVPEQSQLVFRAPATSLECCCFISNDEFLS 1180
GHQ+EVL+IDCLRKERVLTVGRDR+M+LWKVPE+S+LVFRAPA+SLECCCFI+NDEFLS
Sbjct: 306 FGHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLS 365
Query: 1181 GSDDGSIELWNTLRKKPAYIVKNAHAVFAPNGGFNSKDNG-LPNGDCTENGSTKANSY-C 1354
GSDDGSIELW LRKKP YIVKNAHA+ A D G +PNG ENG+ Y C
Sbjct: 366 GSDDGSIELWGMLRKKPVYIVKNAHALSATLRQPEQSDVGKIPNG-YIENGNHNHEDYNC 424
Query: 1355 XXXXXXXXXXXXCRSSDLAASGAGNGIVRLWAVESDTKRIQPLYDLPLAGFVNSLVFAKS 1534
CRSSDLAASGA NG VRLWA+ S+TK I+PL++LPL GFVNSL F+KS
Sbjct: 425 STAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKS 484
Query: 1535 GRFLVAGVGQEPRLGRWGRIPDSRNGVLVQSLNV 1636
G+FLVAGVGQEPRLGRWGR+P +RNGV VQSL +
Sbjct: 485 GQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 518
>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
[Vitis vinifera]
Length = 500
Score = 604 bits (1557), Expect = e-170
Identities = 311/512 (60%), Positives = 372/512 (72%), Gaps = 4/512 (0%)
Frame = +2
Query: 113 SKKKLLNPRPAKKPRKLALEEDSFFLYDSKRKRKLXXXXXXXXXXXXXXXPPFSRFNKGX 292
SKKK+ + +K ++ +++EDSFF ++SKR+RK
Sbjct: 6 SKKKVSVSKGTRKGKRFSIDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDA 65
Query: 293 XXXXXXXXXXX----TVAEKRHRLTKEFVQRHREQADRLLXXXXXXXXXXXRAGRRDAIV 460
T EKR R+ K +V++ R R R G+RD++V
Sbjct: 66 DGLEERQEEDEFAAETADEKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRDSLV 125
Query: 461 AELLQKEQLEDSGRVRRLIASRVQKPETPDGFRLLVRHRQSVTAVALSEDDLKGFSASKD 640
A++LQ+EQLE+SGRVRRLIASRVQKPET D FR+LV+HRQSVTAVALSEDDLKGFSASKD
Sbjct: 126 AQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKD 185
Query: 641 GTIVQWDVENGKSEKYVWPTNGIMNSHGAKNPQNPSTKWSKHVLAIAVSTDGRLLATGGL 820
GTIVQWDV++GK EKY+WPT ++ SHGAK+PQ + K SKHVLA+AVS+DGR LA+GG
Sbjct: 186 GTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGF 245
Query: 821 DRHVHLWDTRTRQHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRKIKLWNAEDRAYVDTN 1000
DRHVHLWDTRTR+H++AFPGHRGPVSCLTFRQGTSELFSGSFDR IK+W+AEDRAY+ +
Sbjct: 246 DRHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSL 305
Query: 1001 VGHQAEVLTIDCLRKERVLTVGRDRTMRLWKVPEQSQLVFRAPATSLECCCFISNDEFLS 1180
GHQ+EVL+IDCLRKERVLTVGRDR+M+LWKVPE+S+LVFRAPA+SLECCCFI+NDEFLS
Sbjct: 306 FGHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLS 365
Query: 1181 GSDDGSIELWNTLRKKPAYIVKNAHAVFAPNGGFNSKDNGLPNGDCTENGSTKANSYCXX 1360
GSDDGSIELW LRKKP YIVKNAHA+ A + N C
Sbjct: 366 GSDDGSIELWGMLRKKPVYIVKNAHALSA------------------TLRQPEQNYNCST 407
Query: 1361 XXXXXXXXXXCRSSDLAASGAGNGIVRLWAVESDTKRIQPLYDLPLAGFVNSLVFAKSGR 1540
CRSSDLAASGA NG VRLWA+ S+TK I+PL++LPL GFVNSL F+KSG+
Sbjct: 408 AYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQ 467
Query: 1541 FLVAGVGQEPRLGRWGRIPDSRNGVLVQSLNV 1636
FLVAGVGQEPRLGRWGR+P +RNGV VQSL +
Sbjct: 468 FLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 499
>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis
sativus]
Length = 494
Score = 566 bits (1459), Expect = e-159
Identities = 295/511 (57%), Positives = 363/511 (71%), Gaps = 4/511 (0%)
Frame = +2
Query: 116 KKKLLNPRPAKKPRKLALEEDSFFLYDSKRKRKLXXXXXXXXXXXXXXXPPFSRFNKGXX 295
KK P AKK + L +D FF +S+++RK+ S + G
Sbjct: 4 KKTSAPPNGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGE---------SDEDNGLM 54
Query: 296 XXXXXXXXXXTVAEKRHRLTKEFVQRHREQADRLLXXXXXXXXXXXR--AGRRDAIVAEL 469
TV EKR R+ E++++ RE A R G +D++VA++
Sbjct: 55 GVEDEEFEEETVDEKRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKI 114
Query: 470 LQKEQLEDSGRVRRLIASRVQKPETPDGFRLLVRHRQSVTAVALSEDDLKGFSASKDGTI 649
LQ+EQLEDSGR+RR IASRVQKP D F+LL++HRQSVTAVALSEDDLKGFS+SKDGTI
Sbjct: 115 LQQEQLEDSGRLRREIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTI 174
Query: 650 VQWDVENGKSEKYVWPTNGIMNSHGAKNPQNPSTKWSKHVLAIAVSTDGRLLATGGLDRH 829
+ WDVE+GK EKY WP++ ++ HGAK+PQ +TK SK ++AVS+DGR LA+GGLDRH
Sbjct: 175 LHWDVESGKGEKYRWPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRH 234
Query: 830 VHLWDTRTRQHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRKIKLWNAEDRAYVDTNVGH 1009
VH+WDTRTR+HIQAFPGHRGPVSCLTFRQGTSELFSGS+DR +K+WN +DRAY++T GH
Sbjct: 235 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 294
Query: 1010 QAEVLTIDCLRKERVLTVGRDRTMRLWKVPEQSQLVFRAPATSLECCCFISNDEFLSGSD 1189
Q++VLTIDCLRKER+LTVGRDR+M+LWKVPE+S+LVFRAPA+SLECCCFISNDEFLSGSD
Sbjct: 295 QSDVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 354
Query: 1190 DGSIELWNTLRKKPAYIVKNAHAVFAPNGGFNSKDNG-LPNGDCTENGSTKAN-SYCXXX 1363
DGSIELW L+KKP +IV+NAH+ + + K+NG +PNG C NG N S+
Sbjct: 355 DGSIELWTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNG-CMGNGDANHNTSHNLSA 413
Query: 1364 XXXXXXXXXCRSSDLAASGAGNGIVRLWAVESDTKRIQPLYDLPLAGFVNSLVFAKSGRF 1543
CR+SDLAASGAGNG VRLWA+ SD K ++PLYDLPL GRF
Sbjct: 414 YSWISSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPL-----------FGRF 462
Query: 1544 LVAGVGQEPRLGRWGRIPDSRNGVLVQSLNV 1636
+VAGVGQEPRLGRWGRIP +RNGV V L +
Sbjct: 463 VVAGVGQEPRLGRWGRIPAARNGVAVHPLKL 493
>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
1 [Glycine max]
Length = 496
Score = 546 bits (1408), Expect = e-153
Identities = 284/498 (57%), Positives = 350/498 (70%), Gaps = 3/498 (0%)
Frame = +2
Query: 152 PRKLALEEDSFFLYDSKRKRKLXXXXXXXXXXXXXXXPPFSR--FNKGXXXXXXXXXXXX 325
PRK D FF DS++++K F F G
Sbjct: 2 PRKKKAH-DPFFTNDSRKRQKQNKKLDEDEEEDAEIESDFDEDGFFAGGGGGGEEQEEEE 60
Query: 326 TVAEKRHRLTKEFVQRHREQADRLLXXXXXXXXXXXRAGRRDAIVAELLQKEQLEDSGRV 505
T AE R RL ++ +QR R+ A + G RD++VA+ L KEQ E+SGRV
Sbjct: 61 TGAEVRKRLAQDLLQRVRKSAQKG-EEEEDDEEEEDEEGARDSLVAQKLLKEQNEESGRV 119
Query: 506 RRLIASRVQKPETPDGFRLLVRHRQSVTAVALSEDDLKGFSASKDGTIVQWDVENGKSEK 685
RR +ASRV K +GFR+L +HR SVTAVALSEDD KGFSASKDGTI+QWDV +G+ E+
Sbjct: 120 RRSLASRV-KVSGDEGFRVLAKHRHSVTAVALSEDDSKGFSASKDGTIMQWDVNSGQCER 178
Query: 686 YVWPTNGIMNSHGAKNPQNPSTKWSKHVLAIAVSTDGRLLATGGLDRHVHLWDTRTRQHI 865
Y WP++ ++ SHG K+PQ +T+ SK VLA+A S+DGR LATGGLDRH+H+WDTRTR+H+
Sbjct: 179 YKWPSDSVLKSHGLKDPQGSATRQSKQVLALAASSDGRYLATGGLDRHIHIWDTRTREHL 238
Query: 866 QAFPGHRGPVSCLTFRQGTSELFSGSFDRKIKLWNAEDRAYVDTNVGHQAEVLTIDCLRK 1045
Q+FPGHRGPVSCLTFRQGTSELFSGSFDR IK+WN EDR Y+ T GHQ+EVL+IDCLRK
Sbjct: 239 QSFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRK 298
Query: 1046 ERVLTVGRDRTMRLWKVPEQSQLVFRAPATSLECCCFISNDEFLSGSDDGSIELWNTLRK 1225
ERVLT GRDR+M+L+KV E+S+LVFRAPA+SLECCCF+ NDE SGSDDGSIELW +RK
Sbjct: 299 ERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRK 358
Query: 1226 KPAYIVKNAHAVFAPNGGFNSKDN-GLPNGDCTENGSTKANSYCXXXXXXXXXXXXCRSS 1402
KP YI++NAHA+ + + KD+ LPNG+ + + +C CR+S
Sbjct: 359 KPIYILRNAHALPVDSMKSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSAVSVCRNS 418
Query: 1403 DLAASGAGNGIVRLWAVESDTKRIQPLYDLPLAGFVNSLVFAKSGRFLVAGVGQEPRLGR 1582
DLAASGAGNG VRLW +ESDTK I+ L ++PLAGFVNSL FAKSG FLVAGVGQEPRLGR
Sbjct: 419 DLAASGAGNGSVRLWEIESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGR 478
Query: 1583 WGRIPDSRNGVLVQSLNV 1636
WGR P++RNGV + L +
Sbjct: 479 WGRNPEARNGVSILPLKL 496
>ref|XP_003535073.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
2 [Glycine max]
Length = 479
Score = 538 bits (1385), Expect = e-150
Identities = 282/498 (56%), Positives = 344/498 (69%), Gaps = 3/498 (0%)
Frame = +2
Query: 152 PRKLALEEDSFFLYDSKRKRKLXXXXXXXXXXXXXXXPPFSR--FNKGXXXXXXXXXXXX 325
PRK D FF DS++++K F F G
Sbjct: 2 PRKKKAH-DPFFTNDSRKRQKQNKKLDEDEEEDAEIESDFDEDGFFAGGGGGGEEQEEEE 60
Query: 326 TVAEKRHRLTKEFVQRHREQADRLLXXXXXXXXXXXRAGRRDAIVAELLQKEQLEDSGRV 505
T AE R RL ++ +QR R+ A + G RD++VA+ L KEQ E+SGRV
Sbjct: 61 TGAEVRKRLAQDLLQRVRKSAQKG-EEEEDDEEEEDEEGARDSLVAQKLLKEQNEESGRV 119
Query: 506 RRLIASRVQKPETPDGFRLLVRHRQSVTAVALSEDDLKGFSASKDGTIVQWDVENGKSEK 685
RR +ASRV K +GFR+L +HR SVTAVALSEDD KGFSASKDGTI+QWDV +G+ E+
Sbjct: 120 RRSLASRV-KVSGDEGFRVLAKHRHSVTAVALSEDDSKGFSASKDGTIMQWDVNSGQCER 178
Query: 686 YVWPTNGIMNSHGAKNPQNPSTKWSKHVLAIAVSTDGRLLATGGLDRHVHLWDTRTRQHI 865
Y WP++ ++ SHG K+PQ +T+ SK VLA+A S+DGR LATGGLDRH+H+WDTRTR+H+
Sbjct: 179 YKWPSDSVLKSHGLKDPQGSATRQSKQVLALAASSDGRYLATGGLDRHIHIWDTRTREHL 238
Query: 866 QAFPGHRGPVSCLTFRQGTSELFSGSFDRKIKLWNAEDRAYVDTNVGHQAEVLTIDCLRK 1045
Q+FPGHRGPVSCLTFRQGTSELFSGSFDR IK+WN EDR Y+ T GHQ+EVL+IDCLRK
Sbjct: 239 QSFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRK 298
Query: 1046 ERVLTVGRDRTMRLWKVPEQSQLVFRAPATSLECCCFISNDEFLSGSDDGSIELWNTLRK 1225
ERVLT GRDR+M+L+KV E+S+LVFRAPA+SLECCCF+ NDE SGSDDGSIELW +RK
Sbjct: 299 ERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRK 358
Query: 1226 KPAYIVKNAHAVFAPNGGFN-SKDNGLPNGDCTENGSTKANSYCXXXXXXXXXXXXCRSS 1402
KP YI++NAHA+ G+N KD+ +C CR+S
Sbjct: 359 KPIYILRNAHALPVDKNGYNHPKDH-----------------HCLSVFSWVSAVSVCRNS 401
Query: 1403 DLAASGAGNGIVRLWAVESDTKRIQPLYDLPLAGFVNSLVFAKSGRFLVAGVGQEPRLGR 1582
DLAASGAGNG VRLW +ESDTK I+ L ++PLAGFVNSL FAKSG FLVAGVGQEPRLGR
Sbjct: 402 DLAASGAGNGSVRLWEIESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGR 461
Query: 1583 WGRIPDSRNGVLVQSLNV 1636
WGR P++RNGV + L +
Sbjct: 462 WGRNPEARNGVSILPLKL 479