BLASTX nr result

ID: Cimicifuga21_contig00007418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007418
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635000.1| PREDICTED: uncharacterized protein LOC100256...   112   2e-22
ref|XP_002316654.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|NP_563886.1| uncharacterized protein [Arabidopsis thaliana] ...    97   7e-18
ref|XP_002305660.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17
ref|XP_002892627.1| hypothetical protein ARALYDRAFT_471258 [Arab...    93   1e-16

>ref|XP_003635000.1| PREDICTED: uncharacterized protein LOC100256799 [Vitis vinifera]
          Length = 202

 Score =  112 bits (280), Expect = 2e-22
 Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
 Frame = +3

Query: 132 NSRHIKKRALRNKALAISFDDKDLKDFVGGFHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311
           +++HIKKRALRNKAL++SF++KDL+DFVGGFH                            
Sbjct: 16  HAKHIKKRALRNKALSVSFNEKDLRDFVGGFHKRKKKRRKEAQQKLQESQRIKRIVERKK 75

Query: 312 XXXXXAFVQGGGAVPANGSEPESGNLDQDEE---TEPKAPLADTKTYDAGNLKIMVTTSE 482
                  VQ GGA  A GSEP+  + + ++     EP A ++ T  YD G+ K++VTTSE
Sbjct: 76  RKLERELVQYGGAPTATGSEPDECDDEHEQHDGVDEPIASVSGTTMYDNGDTKVIVTTSE 135

Query: 483 ISREEDEQKTHIIPRPSGA-------TEKKHNIPVTKKQPLKATPKRRSFSRTQ 623
           ISREE+    H+  +  GA       ++KKHN+PV+KK+  K   + RS  + Q
Sbjct: 136 ISREEE---NHLTEKTQGAAPPAIVGSKKKHNVPVSKKKAFKRVVRHRSQPKLQ 186


>ref|XP_002316654.1| predicted protein [Populus trichocarpa] gi|222859719|gb|EEE97266.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
 Frame = +3

Query: 87  KVEEETEPAIGIGQVNSRHIKKRALRNKALAISFDDKDLKDFVGGFHXXXXXXXXXXXXX 266
           K E E   AI I    + HIKKR L+NK +++SF++KDL+D+V GFH             
Sbjct: 2   KGEIEDNGAIQIPPTRAGHIKKRVLKNKGVSVSFNEKDLRDYVTGFHKRKKKRRKEAIKQ 61

Query: 267 XXXXXXXXXXXXXXXXXXXXAFVQGGGAVPANGSEPESGNLDQDEETEPKAPLADTKTYD 446
                                    GGA PA       G  + DEE EP A ++ T  YD
Sbjct: 62  QEVKLRHKRIAARKQRKLEKELALNGGAPPAADESDNYG--EDDEEIEPIASISGTTKYD 119

Query: 447 AGNLKIMVTTSEISREEDE---QKTHI-IPRPSGATEKKHNIPVTKKQPLKATPKRRSFS 614
            G++++ VTTSEISRE+++   +KT + +PR + A +K H + V+KK   K   K +S S
Sbjct: 120 NGDMQVTVTTSEISREDEDGHSEKTQVTVPRLNEA-DKSHKLSVSKKNSFKKVLKHKSRS 178

Query: 615 RTQ 623
           + Q
Sbjct: 179 KPQ 181


>ref|NP_563886.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17065324|gb|AAL32816.1| Unknown protein [Arabidopsis
           thaliana] gi|20260036|gb|AAM13365.1| unknown protein
           [Arabidopsis thaliana] gi|21536797|gb|AAM61129.1|
           unknown [Arabidopsis thaliana]
           gi|332190582|gb|AEE28703.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 200

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 66/168 (39%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
 Frame = +3

Query: 132 NSRHIKKRALRNKALAISFDDKDLKDFVGGFHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311
           ++RHI KRA +NK+L +SFD+KDLKDFV GFH                            
Sbjct: 18  SARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEAFRRKRIEARKN 77

Query: 312 XXXXXAFVQGGGAVPANGSEPESGNLDQDEETEPKAPLADTKTYDAGNLKIMVTTSEISR 491
                  V G G    +G E E     +DEE EP A  + T  YD G LK+ VTTSEISR
Sbjct: 78  RKLEELMVAGNGEDNEDG-EAEDEVDAEDEEAEPDASTSATTMYDTGELKVTVTTSEISR 136

Query: 492 EEDE--QKTHIIPRPSGATEK---KHNIPVTKKQPLKATPKRRSFSRT 620
           EE+E  +K       SG+T K   K  +PV K +P+K + +RRS ++T
Sbjct: 137 EEEEPIRKEKTQSTESGSTAKASTKQPVPVRKTKPMKQS-RRRSTTKT 183


>ref|XP_002305660.1| predicted protein [Populus trichocarpa] gi|222848624|gb|EEE86171.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 67/182 (36%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
 Frame = +3

Query: 93  EEETEPAIGIGQVNSRHIKKRALRNKALAISFDDKDLKDFVGGFHXXXXXXXXXXXXXXX 272
           E E   AI I      HIKKRAL+NKA+++SF+ KDL+D+V GFH               
Sbjct: 4   EIEDNGAIQIPPTRVGHIKKRALKNKAVSVSFNQKDLRDYVTGFHKRKKKRRKEAIKQQE 63

Query: 273 XXXXXXXXXXXXXXXXXXAFVQGGGAVPANGSEPESGNLDQD-EETEPKAPLADTKTYDA 449
                              F   GGA PA     ES   ++D EE+EP A +  T  YD 
Sbjct: 64  EKLRLKRIASRKQRKLEKEFALHGGAPPATN---ESDEYEEDHEESEPIASVNGTTKYDN 120

Query: 450 GNLKIMVTTSEISREEDE---QKTHI-IPRPSGATEKKHNIPVTKKQPLKATPKRRSFSR 617
           G++++ VTTSEISRE+ +   +KT   +PR   A +K H + V+KK+  K   KR+S ++
Sbjct: 121 GDMQVTVTTSEISREDKDGSSEKTQAEVPRLVEA-DKTHKLSVSKKKSFKKVSKRKSRTK 179

Query: 618 TQ 623
            Q
Sbjct: 180 PQ 181


>ref|XP_002892627.1| hypothetical protein ARALYDRAFT_471258 [Arabidopsis lyrata subsp.
           lyrata] gi|297338469|gb|EFH68886.1| hypothetical protein
           ARALYDRAFT_471258 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 63/164 (38%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
 Frame = +3

Query: 132 NSRHIKKRALRNKALAISFDDKDLKDFVGGFHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311
           ++RHI KRA +NK+L +SFD+KDLKDFV GFH                            
Sbjct: 18  SARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEALRRKRIEARKN 77

Query: 312 XXXXXAFVQGGGAVPANGSEPESGNLDQDEETEPKAPLADTKTYDAGNLKIMVTTSEISR 491
                  V G G    +G E E     +DEE EP A  + T  YD G LK+ VTTS IS 
Sbjct: 78  RKLEELMVAGHGEDNEDG-EAEDEEDAEDEEAEPDASTSGTTMYDTGELKVTVTTSAISC 136

Query: 492 EEDE--QKTHIIPRPSGATEK---KHNIPVTKKQPLKATPKRRS 608
           EE+E  +K       SG+T K   K  +PV K +P+K + KR S
Sbjct: 137 EEEEPIRKDKTQSTESGSTAKASTKQPVPVRKTKPMKQSRKRSS 180


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