BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006922
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533227.1| translation initiation factor if-3, putative...   280   5e-73
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   274   4e-71
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   262   2e-67
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   261   3e-67

>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  280 bits (716), Expect = 5e-73
 Identities = 163/277 (58%), Positives = 191/277 (68%), Gaps = 9/277 (3%)
 Frame = +1

Query: 124 MAGFTSNFSPFKPLVSRGTQXXXXXXXXXXXXXXIKTESNRFVYSVSLSLIT-------- 279
           MAG T++F PF PL+++ T                K    RF  S   SLI+        
Sbjct: 1   MAGITTSF-PFNPLLTQLTTATKTTQFILSSLES-KLFGLRFHCSKPDSLISLSRASVVT 58

Query: 280 -ARYGRPSFNXXXXXXXXXTESVTDPAVDISTIRSASVRLIDDKQNMVGIVSKSEAIQMA 456
            AR+G   F          ++S  D A+DISTIRSA+VRLID++QNMVG+V KSEAIQMA
Sbjct: 59  SARFGG-GFRSSGDRRSRQSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMA 117

Query: 457 EDAGFDLVILSPDADPPVVKIMDYNXXXXXXXXXXXXXXXXSSATRMDMKELKMGYNIDV 636
           E+A  DLVILSPDADPPVV+IMDYN                S+ATRMD+KELKMGYNID 
Sbjct: 118 ENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQ 177

Query: 637 HDYSVRLRAAQKFLNDGDKVKIIVQLKGRENEFRSNAIELIKRFQNDVGELATEESKNLR 816
           HDY VRLRAA+KFL DGDKVK+IV LKGRENEFR+ AIELI+RFQNDVGELATEE+KN R
Sbjct: 178 HDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFR 237

Query: 817 ERNIFIVLIPNKAIQQRAQEQPKKREKPVVSEVSDGV 927
           +RNIFI L PNKAI Q++QE PKKR+K  V+EVS GV
Sbjct: 238 DRNIFITLAPNKAILQKSQEPPKKRDKSAVNEVSAGV 274


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  274 bits (700), Expect = 4e-71
 Identities = 158/290 (54%), Positives = 184/290 (63%), Gaps = 22/290 (7%)
 Frame = +1

Query: 124 MAGFTSNFSPFKPLVSRGTQXXXXXXXXXXXXXXIKTESNRFVYSVSLSLITARYGRPSF 303
           MAG TS   PFKP + R                  KT S+   +S+   L   R   P+F
Sbjct: 1   MAGLTSGI-PFKPFIFR-----------------TKTTSSPLYFSLDSQLFGVRLCSPTF 42

Query: 304 NXXXXXXXXXTESVT----------------------DPAVDISTIRSASVRLIDDKQNM 417
           +           SVT                      D A+D+S+IRSASVRLID++QNM
Sbjct: 43  SKCRSFSSSLHRSVTARYGGYRSSGDAWRSRQRDSDDDQALDVSSIRSASVRLIDEQQNM 102

Query: 418 VGIVSKSEAIQMAEDAGFDLVILSPDADPPVVKIMDYNXXXXXXXXXXXXXXXXSSATRM 597
           VG+VSKS+AIQMAEDA  DLV+LSPDADPPVV+IMDYN                S+A RM
Sbjct: 103 VGVVSKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRM 162

Query: 598 DMKELKMGYNIDVHDYSVRLRAAQKFLNDGDKVKIIVQLKGRENEFRSNAIELIKRFQND 777
           D+KELKMGYNID HDYSVRL+AA+KFL DGDKVKIIV LKGRENEFR+ AIELI+RFQND
Sbjct: 163 DLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQND 222

Query: 778 VGELATEESKNLRERNIFIVLIPNKAIQQRAQEQPKKREKPVVSEVSDGV 927
           VGELATEESKN   RNIFIVL+PNKA+ Q+ QE  KK EK   +E+S GV
Sbjct: 223 VGELATEESKNFSVRNIFIVLVPNKALLQKGQESSKKTEKSAATEISAGV 272


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  264 bits (675), Expect = 3e-68
 Identities = 137/217 (63%), Positives = 165/217 (76%)
 Frame = +1

Query: 277 TARYGRPSFNXXXXXXXXXTESVTDPAVDISTIRSASVRLIDDKQNMVGIVSKSEAIQMA 456
           TAR+G P            ++S  D A++IS+IRSA+VRLID +QNMVG+V+  +AIQMA
Sbjct: 64  TARFGGP--RSYDSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMA 121

Query: 457 EDAGFDLVILSPDADPPVVKIMDYNXXXXXXXXXXXXXXXXSSATRMDMKELKMGYNIDV 636
           ED   +LVI+SPDADPPVV+IMDYN                S+A+RMD+KELKMGYNID 
Sbjct: 122 EDTELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQ 181

Query: 637 HDYSVRLRAAQKFLNDGDKVKIIVQLKGRENEFRSNAIELIKRFQNDVGELATEESKNLR 816
           HDY VRLRAA+KFL DGDKVK+IV LKGRENEFR+NAIEL++RFQNDVGELATEESKN R
Sbjct: 182 HDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEESKNFR 241

Query: 817 ERNIFIVLIPNKAIQQRAQEQPKKREKPVVSEVSDGV 927
           +RN FI L+PNKA+ Q+AQE PKK++K    EVS GV
Sbjct: 242 DRNAFITLVPNKALLQKAQEPPKKKDKSAADEVSAGV 278


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
           sativus]
          Length = 299

 Score =  262 bits (669), Expect = 2e-67
 Identities = 140/235 (59%), Positives = 173/235 (73%), Gaps = 2/235 (0%)
 Frame = +1

Query: 229 KTESNRFVYS--VSLSLITARYGRPSFNXXXXXXXXXTESVTDPAVDISTIRSASVRLID 402
           K+ S R ++S  VS  + T+ + R               S  +  +DIS I+S +VRLID
Sbjct: 65  KSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLID 124

Query: 403 DKQNMVGIVSKSEAIQMAEDAGFDLVILSPDADPPVVKIMDYNXXXXXXXXXXXXXXXXS 582
            +QNMVG+VSK++AIQMAEDA  DLV++SPDADPPVV+IMDYN                S
Sbjct: 125 AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKS 184

Query: 583 SATRMDMKELKMGYNIDVHDYSVRLRAAQKFLNDGDKVKIIVQLKGRENEFRSNAIELIK 762
           +ATRMD+KELKMGYNID HDYSVRL+AA+KFL DGDKVK+IV LKGRENEFR+ AIELI+
Sbjct: 185 AATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIR 244

Query: 763 RFQNDVGELATEESKNLRERNIFIVLIPNKAIQQRAQEQPKKREKPVVSEVSDGV 927
           RFQ +VGELATEE+KN R+RNIFIVL+PNKA+ Q+AQE PKK++KP V+ VS  V
Sbjct: 245 RFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           IF-3-like [Cucumis sativus]
          Length = 299

 Score =  261 bits (666), Expect = 3e-67
 Identities = 140/235 (59%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
 Frame = +1

Query: 229 KTESNRFVYS--VSLSLITARYGRPSFNXXXXXXXXXTESVTDPAVDISTIRSASVRLID 402
           K+ S R ++S  VS  + T+ + R               S  +  +DIS I+S +VRLID
Sbjct: 65  KSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLID 124

Query: 403 DKQNMVGIVSKSEAIQMAEDAGFDLVILSPDADPPVVKIMDYNXXXXXXXXXXXXXXXXS 582
            +QNMVG+VSK++AIQMAEDA  DLV++SPDADPPVV+IMDYN                S
Sbjct: 125 AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKS 184

Query: 583 SATRMDMKELKMGYNIDVHDYSVRLRAAQKFLNDGDKVKIIVQLKGRENEFRSNAIELIK 762
           +ATRMD+KELKMGYNID HDYSVRL+AA+KFL DGDKVK+IV LKGRENEFR+ AIELI+
Sbjct: 185 AATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIR 244

Query: 763 RFQNDVGELATEESKNLRERNIFIVLIPNKAIQQRAQEQPKKREKPVVSEVSDGV 927
           RFQ +VGELATEE+KN R+RNIFIVL+PNKA+ Q+AQE PKK +KP V+ VS  V
Sbjct: 245 RFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKXDKPAVNGVSASV 299