BLASTX nr result

ID: Cimicifuga21_contig00006921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006921
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248...    62   6e-08
emb|CBI15135.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002318586.1| PAF1 complex component [Populus trichocarpa]...    61   8e-08
ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221...    60   1e-07
ref|XP_002514667.1| RNA polymerase-associated protein LEO1, puta...    58   7e-07

>ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248444 [Vitis vinifera]
          Length = 623

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/97 (43%), Positives = 45/97 (46%)
 Frame = -2

Query: 338 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXSNRQPDYPSXXXXXXXXXXXXXXXXXEKQ 159
           MGE KRHQMMQNLFGDQ               N QP Y S                   Q
Sbjct: 1   MGEHKRHQMMQNLFGDQSEEEEEEIDSEHES-NPQPGYISDEGEGGPEPEGEGEIEG--Q 57

Query: 158 GXXXXXXXXELHNLDPDPGESEGERPQSSPEREVSDQ 48
           G        EL ++DPDPGESE ER QSS + EV DQ
Sbjct: 58  GEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGDQ 94


>emb|CBI15135.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/97 (43%), Positives = 45/97 (46%)
 Frame = -2

Query: 338 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXSNRQPDYPSXXXXXXXXXXXXXXXXXEKQ 159
           MGE KRHQMMQNLFGDQ               N QP Y S                   Q
Sbjct: 1   MGEHKRHQMMQNLFGDQSEEEEEEIDSEHES-NPQPGYISDEGEGGPEPEGEGEIEG--Q 57

Query: 158 GXXXXXXXXELHNLDPDPGESEGERPQSSPEREVSDQ 48
           G        EL ++DPDPGESE ER QSS + EV DQ
Sbjct: 58  GEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGDQ 94


>ref|XP_002318586.1| PAF1 complex component [Populus trichocarpa]
           gi|222859259|gb|EEE96806.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 620

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = -2

Query: 338 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXSNRQPDYPSXXXXXXXXXXXXXXXXXEKQ 159
           MGEEKRHQMMQNLFGDQ              SN QP+Y S                 E  
Sbjct: 1   MGEEKRHQMMQNLFGDQ--SEEEEEIDSEHESNPQPNYASDEAEGELRNDGEGEGEGEVD 58

Query: 158 G--XXXXXXXXELHNLDPDPGESEGERPQSSPEREVSDQ 48
           G          E+  ++PDPGESEGER QSS E ++ DQ
Sbjct: 59  GQEDVHVESEGEMREVEPDPGESEGEREQSSQEVDIGDQ 97


>ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221752 [Cucumis sativus]
           gi|449486962|ref|XP_004157455.1| PREDICTED:
           uncharacterized protein LOC101229895 [Cucumis sativus]
          Length = 623

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/94 (44%), Positives = 45/94 (47%)
 Frame = -2

Query: 338 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXSNRQPDYPSXXXXXXXXXXXXXXXXXEKQ 159
           MGEEKRHQMMQNLFGDQ              SN QP+Y S                    
Sbjct: 1   MGEEKRHQMMQNLFGDQ--SEEEEEIDSEHESNPQPNYASDEGEGGAEPEGEGEVEG--H 56

Query: 158 GXXXXXXXXELHNLDPDPGESEGERPQSSPEREV 57
           G        EL + DPDPGESEGER QSS E +V
Sbjct: 57  GEVEIESEGELQDADPDPGESEGERDQSSQEVDV 90


>ref|XP_002514667.1| RNA polymerase-associated protein LEO1, putative [Ricinus communis]
           gi|223546271|gb|EEF47773.1| RNA polymerase-associated
           protein LEO1, putative [Ricinus communis]
          Length = 629

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/97 (40%), Positives = 45/97 (46%)
 Frame = -2

Query: 338 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXSNRQPDYPSXXXXXXXXXXXXXXXXXEKQ 159
           MGEEKRHQMMQNLFGDQ              SN QP+Y S                 E  
Sbjct: 1   MGEEKRHQMMQNLFGDQ-SEDEEEEIDSEHESNPQPNYASDEAEGGLRNEGEGEDEVEGN 59

Query: 158 GXXXXXXXXELHNLDPDPGESEGERPQSSPEREVSDQ 48
                    E+  +DPDP ESEGER  SS E ++ D+
Sbjct: 60  EEAEVVSDVEMREVDPDPRESEGEREASSEEIDIGDE 96


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