BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006912
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...    59   5e-07
emb|CBI18968.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...    56   3e-06

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
 Frame = +2

Query: 2    REAGLHTLGEYSTEAAWTASEDVSSQ-------------------SSRYRVPENLSYIGN 124
            R+AGL  + +Y T+AA   S D  SQ                   S R+      S +  
Sbjct: 732  RQAGLCIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSV-- 789

Query: 125  SNSSKRVRLTEDTNHKEIPTD---------KMDSMKNNTSDESGKVSHAVLDVAAAIEDL 277
               +KR RL ED + K +P           KM+S     +  + + SH V DVAAAIEDL
Sbjct: 790  --HAKRARLLEDESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDL 847

Query: 278  LAESNKIQDTATQGRNG 328
            L +++KI D  + GR G
Sbjct: 848  LEQTSKIHDLKSPGRTG 864


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
 Frame = +2

Query: 2    REAGLHTLGEYSTEAAWTASEDVSSQ-------------------SSRYRVPENLSYIGN 124
            R+AGL  + +Y T+AA   S D  SQ                   S R+      S +  
Sbjct: 732  RQAGLCIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSV-- 789

Query: 125  SNSSKRVRLTEDTNHKEIPTD---------KMDSMKNNTSDESGKVSHAVLDVAAAIEDL 277
               +KR RL ED + K +P           KM+S     +  + + SH V DVAAAIEDL
Sbjct: 790  --HAKRARLLEDESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDL 847

Query: 278  LAESNKIQDTATQGRNG 328
            L +++KI D  + GR G
Sbjct: 848  LEQTSKIHDLKSPGRTG 864


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
 Frame = +2

Query: 2    REAGLHTLGEYSTEAAWTASE---DVSSQSSRYRVPEN-----------LSYIGNSNSSK 139
            R+AG+ T+ ++ T+A    S+    +SSQS   R   N            S+   SN SK
Sbjct: 751  RDAGICTVSQFPTQAVQMISDLPSQLSSQSQTLRGTTNKNVSCGVDNHETSFRIPSNYSK 810

Query: 140  RVRLTED---------TNHKEIPTDKMDSMKNNTSDESGKVSHAVLDVAAAIEDLLAESN 292
            + RL E+          ++  I  D  +  K+N   ++G+  HAV DVAAAIEDLL +++
Sbjct: 811  KARLVEEPCLSNKKPSASNSGIHADDKNFSKDNMLIDAGEAFHAVPDVAAAIEDLLEQTS 870

Query: 293  KIQDTATQGRNG 328
            K+ D  +  + G
Sbjct: 871  KMHDQRSPAQTG 882