BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006896
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated...   339   5e-91
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated...   335   9e-90
emb|CBI17936.3| unnamed protein product [Vitis vinifera]              332   5e-89
ref|XP_002306819.1| predicted protein [Populus trichocarpa] gi|2...   321   1e-85
gb|ACJ85598.1| unknown [Medicago truncatula]                          317   3e-84

>ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Vitis vinifera]
          Length = 569

 Score =  339 bits (869), Expect = 5e-91
 Identities = 179/263 (68%), Positives = 207/263 (78%), Gaps = 5/263 (1%)
 Frame = -1

Query: 775 EPKEENNAEVEIRDRQPAWVDEEEEEGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSRL 596
           E  EE+N E + + R+P WVDEEEE   TN NIAK +RL+KLR +EDE  I+ S Y SRL
Sbjct: 123 ELPEESNDEEDTKQRKPVWVDEEEER--TNINIAKVNRLRKLRKEEDESVISGSAYVSRL 180

Query: 595 RAQHANLNHGTEWAQLGSKKRNXXXXXXXXXXXANNA-----YEDNQDNDSILRTNEDLV 431
           RAQHA LN GTEWAQL S+ R+            N A     Y+D +  D ILRT+EDL+
Sbjct: 181 RAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRTDEDLI 240

Query: 430 VKSDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNAQLLLAAGLDHRLRFFQIDGKR 251
           VKS TKLLPGLLEY+RL+DANA+DPSNGPINSVQFHRNAQLLL AGLD RLRFFQIDGKR
Sbjct: 241 VKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQIDGKR 300

Query: 250 NTMMQSIVLEDLPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQLDRIGPLTGRDEKSLE 71
           NT +QSI L+D PI KASFLPDGS+VI+ GRRKFFYSFDLVKA++D+IGPLTGR+EKSLE
Sbjct: 301 NTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGREEKSLE 360

Query: 70  SFEISPDSRTIAFLGHGGYILLV 2
            FE+SPDS TIAF+G+ G ILLV
Sbjct: 361 VFEVSPDSGTIAFVGNEGCILLV 383


>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Vitis vinifera]
          Length = 568

 Score =  335 bits (858), Expect = 9e-90
 Identities = 177/260 (68%), Positives = 205/260 (78%), Gaps = 5/260 (1%)
 Frame = -1

Query: 766 EENNAEVEIRDRQPAWVDEEEEEGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSRLRAQ 587
           EE++ E + + R+P WVDEEEE+  TN NI+K +RL+KLR +EDE  I+ S Y SRLRAQ
Sbjct: 125 EESSGEEDTKQRKPVWVDEEEEK--TNINISKVNRLRKLRKEEDESLISGSVYVSRLRAQ 182

Query: 586 HANLNHGTEWAQLGSKKRNXXXXXXXXXXXANNA-----YEDNQDNDSILRTNEDLVVKS 422
           HA LN GTEWAQL S  R             N A     ++D +  D ILRTNEDLVVKS
Sbjct: 183 HAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNEDLVVKS 242

Query: 421 DTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNAQLLLAAGLDHRLRFFQIDGKRNTM 242
            TKLLPGLLEY+RLVDANA+DPSNGPINSVQFH NAQLLL AGLD R+RFFQIDG+RNT 
Sbjct: 243 GTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTK 302

Query: 241 MQSIVLEDLPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQLDRIGPLTGRDEKSLESFE 62
           +QSI LED PI KASFLPDGSQVI+ GRRKFFYSFDLVKA++D+IGPL GR+EKSLE+FE
Sbjct: 303 IQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFE 362

Query: 61  ISPDSRTIAFLGHGGYILLV 2
           +SPDS TIAF+G+ GYILLV
Sbjct: 363 VSPDSGTIAFVGNEGYILLV 382


>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  332 bits (852), Expect = 5e-89
 Identities = 175/255 (68%), Positives = 204/255 (80%)
 Frame = -1

Query: 766 EENNAEVEIRDRQPAWVDEEEEEGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSRLRAQ 587
           EE++ E + + R+P WVDEEEE+  TN NI+K +RL+KLR +EDE  I+ S Y SRLRAQ
Sbjct: 162 EESSGEEDTKQRKPVWVDEEEEK--TNINISKVNRLRKLRKEEDESLISGSVYVSRLRAQ 219

Query: 586 HANLNHGTEWAQLGSKKRNXXXXXXXXXXXANNAYEDNQDNDSILRTNEDLVVKSDTKLL 407
           HA LN GTEWAQL S  R             +  ++D +  D ILRTNEDLVVKS TKLL
Sbjct: 220 HAKLNPGTEWAQLDSWSRTYSS---------DYGHKDVEAVDDILRTNEDLVVKSGTKLL 270

Query: 406 PGLLEYTRLVDANAQDPSNGPINSVQFHRNAQLLLAAGLDHRLRFFQIDGKRNTMMQSIV 227
           PGLLEY+RLVDANA+DPSNGPINSVQFH NAQLLL AGLD R+RFFQIDG+RNT +QSI 
Sbjct: 271 PGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTKIQSIF 330

Query: 226 LEDLPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQLDRIGPLTGRDEKSLESFEISPDS 47
           LED PI KASFLPDGSQVI+ GRRKFFYSFDLVKA++D+IGPL GR+EKSLE+FE+SPDS
Sbjct: 331 LEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFEVSPDS 390

Query: 46  RTIAFLGHGGYILLV 2
            TIAF+G+ GYILLV
Sbjct: 391 GTIAFVGNEGYILLV 405


>ref|XP_002306819.1| predicted protein [Populus trichocarpa] gi|222856268|gb|EEE93815.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  321 bits (823), Expect = 1e-85
 Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 10/268 (3%)
 Frame = -1

Query: 775 EPKEENNAEVEIR-----DRQPAWVDEEEEEGNTNANIAKKHRLKKLRTKEDEGSIALSD 611
           EP  E + E+        +R+  W+DEEEE+  T  NIAK +RL+KLR  EDE  I+ S 
Sbjct: 40  EPGHEEDVELMKESDIEEERKAVWLDEEEEK--TKVNIAKVNRLRKLRKDEDESLISGSQ 97

Query: 610 YGSRLRAQHANLNHGTEWAQLGSKKRNXXXXXXXXXXXANN-----AYEDNQDNDSILRT 446
           Y SRLRAQHA +N GT+WA+L S+ RN            N       Y+++   D ILRT
Sbjct: 98  YVSRLRAQHAKMNPGTDWARLDSQSRNDGLSDDELSDEENGIVLARGYKNDNAYDDILRT 157

Query: 445 NEDLVVKSDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNAQLLLAAGLDHRLRFFQ 266
           NEDLVVKS  KLLPGLLEY+RLVDANA+DPSNGPINSVQFH+NAQLLLAAGLD RLRFFQ
Sbjct: 158 NEDLVVKSRAKLLPGLLEYSRLVDANAEDPSNGPINSVQFHQNAQLLLAAGLDRRLRFFQ 217

Query: 265 IDGKRNTMMQSIVLEDLPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQLDRIGPLTGRD 86
           IDGKRNT +QSI ++D PI KASFLPDGS+VI+ GRRKFFYSFDLVKA++D+IGPL GR+
Sbjct: 218 IDGKRNTKIQSIFIDDCPIRKASFLPDGSKVIIAGRRKFFYSFDLVKAKVDKIGPLVGRE 277

Query: 85  EKSLESFEISPDSRTIAFLGHGGYILLV 2
           EKSLE FE+SPDS  IAF+G+ GYILLV
Sbjct: 278 EKSLEVFEVSPDSSMIAFVGNEGYILLV 305


>gb|ACJ85598.1| unknown [Medicago truncatula]
          Length = 555

 Score =  317 bits (811), Expect = 3e-84
 Identities = 164/246 (66%), Positives = 193/246 (78%), Gaps = 2/246 (0%)
 Frame = -1

Query: 733 RQPAWVDEEEEEGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSRLRAQHANLNHGTEWA 554
           R+P WVDEEEE+     NIAK +RL+KLR +EDE  I+ S+Y SRLRAQHA LN GT+WA
Sbjct: 126 RKPVWVDEEEEK--VTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDWA 183

Query: 553 QLGSKKRNXXXXXXXXXXXANNAYEDN--QDNDSILRTNEDLVVKSDTKLLPGLLEYTRL 380
           QL S+ +             N A      +D D ILRTNEDLVVKS +KLLPG LEY++L
Sbjct: 184 QLDSRSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLEYSKL 243

Query: 379 VDANAQDPSNGPINSVQFHRNAQLLLAAGLDHRLRFFQIDGKRNTMMQSIVLEDLPIYKA 200
           VDAN QDP+NGPINSVQFHRN QLLLAAGLD +L+FFQIDGKRNT ++SI LED PI KA
Sbjct: 244 VDANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCPIRKA 303

Query: 199 SFLPDGSQVIVGGRRKFFYSFDLVKAQLDRIGPLTGRDEKSLESFEISPDSRTIAFLGHG 20
           SFLPDGSQVI+ GRRKFFYS DLVKA++D+IGPL GR+EKS+E FE+SPDS+ IAF+G+ 
Sbjct: 304 SFLPDGSQVIISGRRKFFYSLDLVKARVDKIGPLLGREEKSIEVFEVSPDSQLIAFVGNE 363

Query: 19  GYILLV 2
           GYILLV
Sbjct: 364 GYILLV 369