BLASTX nr result

ID: Cimicifuga21_contig00006880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006880
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278026.1| PREDICTED: uncharacterized protein LOC100265...   372   e-100
ref|XP_002521269.1| conserved hypothetical protein [Ricinus comm...   364   3e-98
ref|XP_002312946.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91
emb|CBI37844.3| unnamed protein product [Vitis vinifera]              339   7e-91
ref|XP_003555859.1| PREDICTED: uncharacterized protein LOC100794...   329   9e-88

>ref|XP_002278026.1| PREDICTED: uncharacterized protein LOC100265837 [Vitis vinifera]
          Length = 291

 Score =  372 bits (954), Expect = e-100
 Identities = 199/296 (67%), Positives = 232/296 (78%), Gaps = 1/296 (0%)
 Frame = -2

Query: 1094 ASSLSFGPNRVMTQFNSTIRSLWTRPMTRRSATKLLGKT-NSNHSCWGVVIPSRLTFARI 918
            A++L   PNR +   ++   S   RP  RRS +  +     +    WGV  PSR    R 
Sbjct: 2    AATLFLRPNRAVA--SAAAGSSRPRPPARRSGSAHVATLIRTRRFGWGVSSPSRRALFR- 58

Query: 917  PRLVLAGSRADDSVPYEMSVENALKLLGVSEGDSFDDILRAKKSIIASCRDDQEAIAQVE 738
                 AGSRADDS P+EMSVE+ALKLLGVSEG SFDDILRAK SI+ +C+D+QEAIAQVE
Sbjct: 59   ---TRAGSRADDSAPFEMSVESALKLLGVSEGASFDDILRAKNSIVKACKDNQEAIAQVE 115

Query: 737  AAYDMLLMQSLTQRRAGKVVSSSIRYADVKPVSSPGMSSMPRWLQTTVKNAPISIETPPA 558
            AAYDMLLMQSLTQRRAGKVV+S IRYADVKPV++ G+ SMP+WLQTTVK++P+S+ETP A
Sbjct: 116  AAYDMLLMQSLTQRRAGKVVNSGIRYADVKPVNASGLGSMPQWLQTTVKSSPVSVETPSA 175

Query: 557  SNVGIQAGVYGALMVLTYANGASTSSAGPYAGADVPGLILATSFGASLYFLTKKNIKLGK 378
             N+GIQAGVYGALM LTY NGASTSS GPYAGADVPGLILATSFGASLYF+TKKN+KLGK
Sbjct: 176  GNLGIQAGVYGALMGLTYINGASTSSVGPYAGADVPGLILATSFGASLYFMTKKNVKLGK 235

Query: 377  SSVITIXXXXXXXXXXXXVENWLQVDIVPFFGVHSPAVVVSEFIIFSQFLVSLYLR 210
            ++VIT+            VE+WLQVDIVPF G+H+PAVVVSEFI+FSQFLVSLYLR
Sbjct: 236  ATVITLGGLVAGAVVGSAVESWLQVDIVPFLGIHAPAVVVSEFILFSQFLVSLYLR 291


>ref|XP_002521269.1| conserved hypothetical protein [Ricinus communis]
            gi|223539537|gb|EEF41125.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 293

 Score =  364 bits (934), Expect = 3e-98
 Identities = 192/299 (64%), Positives = 230/299 (76%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1100 IAASSLSFGPNRVMTQFNSTIRSLWTRPMTRRSATKLLGKTNS-NHSCWGV-VIPSRLTF 927
            +AA+ LS  PN + +       S + RP T  ++T +  +  S     W + ++PSR  F
Sbjct: 1    MAAAPLSVRPNSLSSN------SAFPRPPTAPTSTTISTQLQSIKKEPWRLTILPSRRYF 54

Query: 926  ARIPRLVLAGSRADDSVPYEMSVENALKLLGVSEGDSFDDILRAKKSIIASCRDDQEAIA 747
            +       A SRADDS P+EMSVENALKLLGVSEG SFDDILRAKKSI+ASC+DDQEA+A
Sbjct: 55   SGKGARARASSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKKSILASCKDDQEAVA 114

Query: 746  QVEAAYDMLLMQSLTQRRAGKVVSSSIRYADVKPVSSPGMSSMPRWLQTTVKNAPISIET 567
            QVEAAYDMLLMQSLTQRRAGKV +S IRYADVKP++ PGM S+P+WLQ T+K  P+S+ET
Sbjct: 115  QVEAAYDMLLMQSLTQRRAGKVANSDIRYADVKPINGPGMGSVPQWLQATMKKTPVSVET 174

Query: 566  PPASNVGIQAGVYGALMVLTYANGASTSSAGPYAGADVPGLILATSFGASLYFLTKKNIK 387
            P   ++GI+AGVYGA+MVLTY NGAS+ S  PYAGADVPGLILAT+FGASLYFLTKKN+K
Sbjct: 175  PSTGDLGIRAGVYGAMMVLTYVNGASSISVAPYAGADVPGLILATTFGASLYFLTKKNVK 234

Query: 386  LGKSSVITIXXXXXXXXXXXXVENWLQVDIVPFFGVHSPAVVVSEFIIFSQFLVSLYLR 210
            LGK+++IT+            VENWLQVDIVPF G+HSPA VVSEFI+FSQFLVSLYLR
Sbjct: 235  LGKATLITLGGLAAGAVVGSAVENWLQVDIVPFLGIHSPAAVVSEFILFSQFLVSLYLR 293


>ref|XP_002312946.1| predicted protein [Populus trichocarpa] gi|222849354|gb|EEE86901.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  340 bits (871), Expect = 5e-91
 Identities = 173/235 (73%), Positives = 197/235 (83%), Gaps = 1/235 (0%)
 Frame = -2

Query: 911 LVLAGSRADDS-VPYEMSVENALKLLGVSEGDSFDDILRAKKSIIASCRDDQEAIAQVEA 735
           LV AGSRADDS  P+EMSVE+ALKLLGV +G SFD+ILRAKK I+A+C+DDQEAIAQVE 
Sbjct: 55  LVRAGSRADDSSAPFEMSVESALKLLGVPDGASFDEILRAKKLIVATCKDDQEAIAQVET 114

Query: 734 AYDMLLMQSLTQRRAGKVVSSSIRYADVKPVSSPGMSSMPRWLQTTVKNAPISIETPPAS 555
           AYDMLLM+SLTQRRAGKV SS+IRYADVKPV+ PGM SMP+WLQTT+K  P+S+ETP   
Sbjct: 115 AYDMLLMRSLTQRRAGKVASSNIRYADVKPVNGPGMGSMPQWLQTTIKKTPVSVETPSTG 174

Query: 554 NVGIQAGVYGALMVLTYANGASTSSAGPYAGADVPGLILATSFGASLYFLTKKNIKLGKS 375
            + +QAGVYGALMVLTY NG ST S  PYAGADVPGL+LATSFGASLYF+TKKN+KLGK+
Sbjct: 175 ELSLQAGVYGALMVLTYVNGTSTPSVAPYAGADVPGLLLATSFGASLYFMTKKNVKLGKA 234

Query: 374 SVITIXXXXXXXXXXXXVENWLQVDIVPFFGVHSPAVVVSEFIIFSQFLVSLYLR 210
           +VITI            VEN LQVD+VP  G+HSPA VVSEFI+FSQFLVSLYLR
Sbjct: 235 TVITIGGLAAGAVVGSAVENLLQVDVVPLLGLHSPAAVVSEFILFSQFLVSLYLR 289


>emb|CBI37844.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  339 bits (870), Expect = 7e-91
 Identities = 171/219 (78%), Positives = 195/219 (89%)
 Frame = -2

Query: 866 MSVENALKLLGVSEGDSFDDILRAKKSIIASCRDDQEAIAQVEAAYDMLLMQSLTQRRAG 687
           MSVE+ALKLLGVSEG SFDDILRAK SI+ +C+D+QEAIAQVEAAYDMLLMQSLTQRRAG
Sbjct: 1   MSVESALKLLGVSEGASFDDILRAKNSIVKACKDNQEAIAQVEAAYDMLLMQSLTQRRAG 60

Query: 686 KVVSSSIRYADVKPVSSPGMSSMPRWLQTTVKNAPISIETPPASNVGIQAGVYGALMVLT 507
           KVV+S IRYADVKPV++ G+ SMP+WLQTTVK++P+S+ETP A N+GIQAGVYGALM LT
Sbjct: 61  KVVNSGIRYADVKPVNASGLGSMPQWLQTTVKSSPVSVETPSAGNLGIQAGVYGALMGLT 120

Query: 506 YANGASTSSAGPYAGADVPGLILATSFGASLYFLTKKNIKLGKSSVITIXXXXXXXXXXX 327
           Y NGASTSS GPYAGADVPGLILATSFGASLYF+TKKN+KLGK++VIT+           
Sbjct: 121 YINGASTSSVGPYAGADVPGLILATSFGASLYFMTKKNVKLGKATVITLGGLVAGAVVGS 180

Query: 326 XVENWLQVDIVPFFGVHSPAVVVSEFIIFSQFLVSLYLR 210
            VE+WLQVDIVPF G+H+PAVVVSEFI+FSQFLVSLYLR
Sbjct: 181 AVESWLQVDIVPFLGIHAPAVVVSEFILFSQFLVSLYLR 219


>ref|XP_003555859.1| PREDICTED: uncharacterized protein LOC100794285 [Glycine max]
          Length = 280

 Score =  329 bits (843), Expect = 9e-88
 Identities = 186/297 (62%), Positives = 217/297 (73%)
 Frame = -2

Query: 1100 IAASSLSFGPNRVMTQFNSTIRSLWTRPMTRRSATKLLGKTNSNHSCWGVVIPSRLTFAR 921
            +AA++LS  P+R+         S++ RP  +    K +         W    P       
Sbjct: 1    MAAATLSVRPDRLSPG------SVFPRPPVQPPLRKPIAAPEP----WRAAAPRIRIRTV 50

Query: 920  IPRLVLAGSRADDSVPYEMSVENALKLLGVSEGDSFDDILRAKKSIIASCRDDQEAIAQV 741
             P  V A SRADDS P+EMSVENALKLLGVSEG SFDDILRAK +I+A+C+DDQ+AIAQV
Sbjct: 51   AP--VQASSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNAIVANCKDDQDAIAQV 108

Query: 740  EAAYDMLLMQSLTQRRAGKVVSSSIRYADVKPVSSPGMSSMPRWLQTTVKNAPISIETPP 561
            EAAYDMLLMQSLTQRRAGKVV+SS+RYADVK V SP   SMP+WL    KN+P+SIE+P 
Sbjct: 109  EAAYDMLLMQSLTQRRAGKVVNSSVRYADVKRVKSPAGGSMPQWL----KNSPVSIESPS 164

Query: 560  ASNVGIQAGVYGALMVLTYANGASTSSAGPYAGADVPGLILATSFGASLYFLTKKNIKLG 381
             S++G+QAGVYGALM LTY NGAS  +AG YAGADVPGL+LA SFGASLYF+TKKN+KLG
Sbjct: 165  TSDLGLQAGVYGALMGLTYLNGASAPAAG-YAGADVPGLLLAGSFGASLYFMTKKNVKLG 223

Query: 380  KSSVITIXXXXXXXXXXXXVENWLQVDIVPFFGVHSPAVVVSEFIIFSQFLVSLYLR 210
            K++VITI            VENWLQVDIVPF G+HSPA VVSE II SQFLVSLYLR
Sbjct: 224  KATVITIGGLVAGAVVGSAVENWLQVDIVPFLGIHSPAAVVSEIIIISQFLVSLYLR 280


Top