BLASTX nr result

ID: Cimicifuga21_contig00006872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006872
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   469   e-130
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   457   e-126
ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   456   e-126
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   424   e-116

>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
            TRMT61A [Vitis vinifera]
          Length = 324

 Score =  469 bits (1206), Expect = e-130
 Identities = 236/311 (75%), Positives = 259/311 (83%)
 Frame = +3

Query: 303  MIPIDGIKKISFQCLIANGDLVIVYERYDNMKAVIVCEGSELQNRFGVFKHSDWIGKPFG 482
            M+PID  K+ISF+  I++GDLVIVYER+DNMKAV VCEGS LQNRFGVFKHSDWIGKPFG
Sbjct: 1    MLPIDAEKRISFKRCISDGDLVIVYERHDNMKAVKVCEGSTLQNRFGVFKHSDWIGKPFG 60

Query: 483  SKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVSFLEIVPGCIVXXXXXXXX 662
            SK+ S+KGGFVYLLAPTPELWTLVLSHRTQILYIADIS V+ +LEI+PGC+V        
Sbjct: 61   SKVLSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISLVIMYLEIIPGCLVLESGTGSG 120

Query: 663  XXXXXXARAVAPTGHVYTFDFHEQRADSAREDFKKTGLSNLVTVGVRDIQGEGFSNEFCG 842
                  ARAVAP GHVYTFDFHEQRA SAREDF+K GLS+ VTVGVRDIQGEGF +EF G
Sbjct: 121  SLTTSLARAVAPNGHVYTFDFHEQRAASAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSG 180

Query: 843  AADSVFLDLPQPWLAIPSAGKMLKQDGVLCSFSPCIEQVQRSCETLRTNFTDVRTFEVLL 1022
             ADSVFLDLPQPWLAIPSAGKMLK+DGVLCSFSPCIEQVQRS ETL +NFTD+RTFEVLL
Sbjct: 181  LADSVFLDLPQPWLAIPSAGKMLKEDGVLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLL 240

Query: 1023 RTYEVREGKTDFGGSVNGGPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHT 1202
            RTYEVREGK D      GG LGP P KRRQ S E  N  +   +ST VMARP+AEA+GHT
Sbjct: 241  RTYEVREGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIP-TSTTVMARPAAEARGHT 299

Query: 1203 GYLTFARLKCL 1235
            G+LTFARLKCL
Sbjct: 300  GFLTFARLKCL 310


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
            subunit TRMT61A-like [Cucumis sativus]
            gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
            (adenine(58)-N(1))-methyltransferase catalytic subunit
            TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  457 bits (1175), Expect = e-126
 Identities = 231/311 (74%), Positives = 257/311 (82%)
 Frame = +3

Query: 303  MIPIDGIKKISFQCLIANGDLVIVYERYDNMKAVIVCEGSELQNRFGVFKHSDWIGKPFG 482
            M+P D +K ISF   I +GDLVIVYER+D MKAV VC+GS LQNRFGVFKHSDWIGKPFG
Sbjct: 1    MLPTDELKSISFTRSIRDGDLVIVYERHDIMKAVKVCDGSTLQNRFGVFKHSDWIGKPFG 60

Query: 483  SKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVSFLEIVPGCIVXXXXXXXX 662
            SK  S+KGGFVYLLAPTPELWTLVLSHRTQILYIADISFV+ FLEIVPGC+V        
Sbjct: 61   SKALSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMFLEIVPGCLVLESGTGSG 120

Query: 663  XXXXXXARAVAPTGHVYTFDFHEQRADSAREDFKKTGLSNLVTVGVRDIQGEGFSNEFCG 842
                  ARAVAPTGHVYTFDFHEQRA SAREDF+KTGL++LVTVGVRDIQG+GF  EF G
Sbjct: 121  SLTTSLARAVAPTGHVYTFDFHEQRASSAREDFEKTGLTSLVTVGVRDIQGQGFPEEFVG 180

Query: 843  AADSVFLDLPQPWLAIPSAGKMLKQDGVLCSFSPCIEQVQRSCETLRTNFTDVRTFEVLL 1022
             ADSVFLDLPQPWLAIPSA +MLKQDG+LCSFSPCIEQVQRS ETLR+ FTD+RTFEVLL
Sbjct: 181  LADSVFLDLPQPWLAIPSAERMLKQDGMLCSFSPCIEQVQRSVETLRSKFTDIRTFEVLL 240

Query: 1023 RTYEVREGKTDFGGSVNGGPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHT 1202
            RTYEV+EG+T+      GG +G  PCKRR  S E ++  DN+ SST VM RP +EA+GHT
Sbjct: 241  RTYEVKEGRTESNQVDGGGSVGLPPCKRRLRSKESDD-MDNE-SSTTVMVRPCSEARGHT 298

Query: 1203 GYLTFARLKCL 1235
            GYLTFARL+CL
Sbjct: 299  GYLTFARLRCL 309


>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
            putative [Ricinus communis]
          Length = 311

 Score =  456 bits (1173), Expect = e-126
 Identities = 228/311 (73%), Positives = 256/311 (82%)
 Frame = +3

Query: 303  MIPIDGIKKISFQCLIANGDLVIVYERYDNMKAVIVCEGSELQNRFGVFKHSDWIGKPFG 482
            M+  D  +++SF   I +GDLVIVYE++D MKA+ VCE S LQNRFGVFKHSDWIGKPFG
Sbjct: 1    MLHTDPTRRLSFTRCITDGDLVIVYEKHDTMKAIKVCETSVLQNRFGVFKHSDWIGKPFG 60

Query: 483  SKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVSFLEIVPGCIVXXXXXXXX 662
            SK+FS+KGGFVYLLAPTPELWTLVLSHRTQILYIADISF++++LEIVPGC+V        
Sbjct: 61   SKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFLITYLEIVPGCLVLESGTGSG 120

Query: 663  XXXXXXARAVAPTGHVYTFDFHEQRADSAREDFKKTGLSNLVTVGVRDIQGEGFSNEFCG 842
                  ARAVAPTGHVYTFDFHEQRA SAREDF+KTG+S+LVTVGVRDIQGEGF +E+ G
Sbjct: 121  SLTTSLARAVAPTGHVYTFDFHEQRAASAREDFEKTGVSSLVTVGVRDIQGEGFPDEYSG 180

Query: 843  AADSVFLDLPQPWLAIPSAGKMLKQDGVLCSFSPCIEQVQRSCETLRTNFTDVRTFEVLL 1022
              DSVFLDLPQPWLAIPSA KMLKQDGVLCSFSPCIEQVQRSCETLR+NFTD+RTFEVLL
Sbjct: 181  LVDSVFLDLPQPWLAIPSAAKMLKQDGVLCSFSPCIEQVQRSCETLRSNFTDIRTFEVLL 240

Query: 1023 RTYEVREGKTDFGGSVNGGPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHT 1202
            RTYEVRE K D G    G  LG  P KRRQ S+E  N + N  SS  +MARP  +++GHT
Sbjct: 241  RTYEVREVKMDCGQGEEGISLGSPPYKRRQRSSEGSNVQ-NSSSSPVIMARPCGDSRGHT 299

Query: 1203 GYLTFARLKCL 1235
            GYLTFARLKCL
Sbjct: 300  GYLTFARLKCL 310


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  427 bits (1099), Expect = e-117
 Identities = 218/311 (70%), Positives = 248/311 (79%)
 Frame = +3

Query: 303  MIPIDGIKKISFQCLIANGDLVIVYERYDNMKAVIVCEGSELQNRFGVFKHSDWIGKPFG 482
            M+  DG KK+SF   I +GDLVIVYE+ D MKAV VCE S LQNRFGVFKHSDWIGKPFG
Sbjct: 1    MLCSDGEKKLSFCRSIKDGDLVIVYEKRDVMKAVKVCETSVLQNRFGVFKHSDWIGKPFG 60

Query: 483  SKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVSFLEIVPGCIVXXXXXXXX 662
            SK+ S+KGGFVYLLAPTPELWTLVLSHRTQILYIADISF++++LEIVPG +V        
Sbjct: 61   SKVLSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFLITYLEIVPGSLVLESGTGSG 120

Query: 663  XXXXXXARAVAPTGHVYTFDFHEQRADSAREDFKKTGLSNLVTVGVRDIQGEGFSNEFCG 842
                  ARAVAPTGHVYTFDFH+QRA SAREDF+ TG+ +LVTVG RDIQGEGF +E+ G
Sbjct: 121  SLTTSLARAVAPTGHVYTFDFHQQRAASAREDFQSTGVGSLVTVGARDIQGEGFPDEYSG 180

Query: 843  AADSVFLDLPQPWLAIPSAGKMLKQDGVLCSFSPCIEQVQRSCETLRTNFTDVRTFEVLL 1022
             ADSVFLDLPQPWLAI SAGKMLKQDG LCSFSPCIEQVQR+CE L++NF D+RTFEVLL
Sbjct: 181  LADSVFLDLPQPWLAILSAGKMLKQDGTLCSFSPCIEQVQRTCEALKSNFRDIRTFEVLL 240

Query: 1023 RTYEVREGKTDFGGSVNGGPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHT 1202
            RT+EV EGK D      G  +G  P KRRQ S+E    +D+  SS  + ARP A+A+GHT
Sbjct: 241  RTFEVHEGKMDSCQGDEGVSVGSPPYKRRQRSSEGSIVQDSS-SSPTIKARPCADARGHT 299

Query: 1203 GYLTFARLKCL 1235
            GYLTF+RLKCL
Sbjct: 300  GYLTFSRLKCL 310


>ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
            TRMT61A-like [Glycine max]
          Length = 309

 Score =  424 bits (1089), Expect = e-116
 Identities = 219/311 (70%), Positives = 245/311 (78%)
 Frame = +3

Query: 303  MIPIDGIKKISFQCLIANGDLVIVYERYDNMKAVIVCEGSELQNRFGVFKHSDWIGKPFG 482
            M+ +   KK+SF   I NGDLVIVYER+D MKAV V EGS LQNRFGVFKHS+WIGKPFG
Sbjct: 1    MLALHPAKKLSFNRPINNGDLVIVYERHDIMKAVTVSEGSVLQNRFGVFKHSEWIGKPFG 60

Query: 483  SKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVSFLEIVPGCIVXXXXXXXX 662
            SK+ SSKGGFVYLLAPTPELWTLVL+HRTQILYIADISFV+ +LEIVPGC+V        
Sbjct: 61   SKVVSSKGGFVYLLAPTPELWTLVLNHRTQILYIADISFVIMYLEIVPGCVVLESGTGSG 120

Query: 663  XXXXXXARAVAPTGHVYTFDFHEQRADSAREDFKKTGLSNLVTVGVRDIQGEGFSNEFCG 842
                  ARAVAP+GHVYTFDFHEQRA SAR DF++TGLS+LVTV VRDIQGEGF + F G
Sbjct: 121  SLTTSLARAVAPSGHVYTFDFHEQRAASARADFERTGLSSLVTVQVRDIQGEGFPDTFTG 180

Query: 843  AADSVFLDLPQPWLAIPSAGKMLKQDGVLCSFSPCIEQVQRSCETLRTNFTDVRTFEVLL 1022
             ADSVFLDLPQPWL IPSA K+L+ DG LCSFSPCIEQVQR+CETLRT FTD+RTFEVLL
Sbjct: 181  MADSVFLDLPQPWLVIPSAAKVLRHDGTLCSFSPCIEQVQRTCETLRTCFTDIRTFEVLL 240

Query: 1023 RTYEVREGKTDFGGSVNGGPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHT 1202
            RTYEVRE K     S+ G   G LP KRRQ S+       +  S ++VMARP  EA+GHT
Sbjct: 241  RTYEVREEKMQ---SLCGDGNGSLPSKRRQCSDGSYVLSSSSPSISSVMARPCGEARGHT 297

Query: 1203 GYLTFARLKCL 1235
            GYLTFAR+K L
Sbjct: 298  GYLTFARVKSL 308


Top