BLASTX nr result

ID: Cimicifuga21_contig00006851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006851
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812...    60   1e-07
gb|AFK47840.1| unknown [Lotus japonicus]                               59   5e-07
ref|XP_003609494.1| F-box protein [Medicago truncatula] gi|35551...    57   2e-06
ref|XP_003622434.1| F-box/kelch-repeat protein [Medicago truncat...    57   2e-06

>ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max]
          Length = 975

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = -3

Query: 140 AKKSLPLELVMEILSWLAVKPLMRFRCVSKTWLRLLTVDSHFIKLH 3
           A   LP EL++EILSWL VKPLMRFRCVSK W  L+   S FIKLH
Sbjct: 5   ASPVLPQELIVEILSWLPVKPLMRFRCVSKAWYSLIFHPS-FIKLH 49


>gb|AFK47840.1| unknown [Lotus japonicus]
          Length = 190

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -3

Query: 158 KGSRSMAKKSLPLELVMEILSWLAVKPLMRFRCVSKTWLRLLTVDSHFIKLH 3
           K SR ++   LP EL+ EI SWL VK LMRF CVSK+W  L+  DS F+KLH
Sbjct: 2   KNSRDVS--ILPPELLTEIFSWLPVKTLMRFACVSKSWKSLIIDDSSFVKLH 51


>ref|XP_003609494.1| F-box protein [Medicago truncatula] gi|355510549|gb|AES91691.1|
           F-box protein [Medicago truncatula]
          Length = 425

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%)
 Frame = -3

Query: 179 RRRNRSEKGSRSMAKKSLPLELVMEILSWLAVKPLMRFRCVSKTWLRLLTVDSHFIKLH 3
           R + R+ K         LPLEL+++IL WL VK L+RF+CV K+W  L++ D+HF   H
Sbjct: 6   REKRRTVKKKEEKTAPYLPLELIIQILLWLPVKSLLRFKCVCKSWFSLIS-DTHFANSH 63


>ref|XP_003622434.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355497449|gb|AES78652.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 334

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 197 NPTKGARRRNRSEKGSRSMAKKSLPLELVMEILSWLAVKPLMRFRCVSKTWLRLLTVDSH 18
           N    +RRR+R    S S     LP +L+ EILSWL VKPLM+ +CVSK+W   L  DS+
Sbjct: 3   NEPPKSRRRSRHSNPSHSAI---LPDDLIFEILSWLTVKPLMKLKCVSKSW-NTLICDSN 58

Query: 17  FIKL 6
           F K+
Sbjct: 59  FAKI 62


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