BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006838
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279515.2| PREDICTED: flowering time control protein FC...   318   3e-84
emb|CBI22860.3| unnamed protein product [Vitis vinifera]              318   3e-84
ref|XP_002519252.1| Flowering time control protein FCA, putative...   302   2e-79
ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|2...   296   9e-78
ref|XP_003529516.1| PREDICTED: flowering time control protein FC...   288   3e-75

>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
          Length = 785

 Score =  318 bits (815), Expect = 3e-84
 Identities = 171/284 (60%), Positives = 201/284 (70%), Gaps = 5/284 (1%)
 Frame = +3

Query: 297  GGRDGSRPMEDSSGKPPFSFSGVRG--DNTDNGGYAKLFVASVPRKATEEDIRSLFEEHG 470
            GG   +  +  S  K  F F G  G  D  D GG+AKLFV SVPR ATEEDIR LFEEHG
Sbjct: 83   GGFASNYQVPLSGQKRGFGFPGRGGSPDRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHG 142

Query: 471  NVVEVVFIKDKRTGHQQRCCFVKYASFEDAERAIKALDNQYTFPGEFGPIEVRYADRERG 650
            NV+EV  IKDKRTG QQ CCF+KYA+ E+AERAI+AL NQYT PG  GPI+VRYAD ER 
Sbjct: 143  NVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHNQYTLPGGVGPIQVRYADGERE 202

Query: 651  RLPASEMKLFVTGLNKQATEKEIEEIFSPYGRVEDIFILYDEMKLSRGIAFVEFSHKDMA 830
            RL A E KLFV  LNKQATEKE++EIFSPYG+VED++++ DE+K SRG  FV+FSH+DMA
Sbjct: 203  RLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMA 262

Query: 831  VAAINALHGSYVVTGCHMPLIVRFAVPKRPKAGELRSDTAFRGSGFGPQAHSSLGIRSEP 1010
            +AAINAL+G Y + GC  PL VRFA PKRP+ GE R   AF G GFGP+  +  G+R   
Sbjct: 263  MAAINALNGIYTMRGCDQPLTVRFADPKRPRPGESRGAPAFGGPGFGPRFQAP-GVRPTM 321

Query: 1011 NQGDRTG-GHIQPNASWKTSPHSSGPSSQA--HDFACHSVAKTG 1133
            NQGD  G G I PNA    SP + GPSS A  H F   S+ ++G
Sbjct: 322  NQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSG 365



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = +3

Query: 1212 IPFRTHASTHPTFEWSEHTCPDGFNYYYNCITKESRWEEPEDLTYFKQQELSVWNVKVQS 1391
            +P  T A       W+EHT PDG+ YY+N +T ESRWE+PE+LT  +QQ+      + +S
Sbjct: 624  VPVTTQAVAPVKCNWTEHTSPDGYKYYHNSVTGESRWEKPEELTLLEQQQ-----QQQKS 678

Query: 1392 KVQNSVTSTAFVNQSHSNTTGSSSRKIP 1475
             VQ S        Q+ S+T   S+++IP
Sbjct: 679  SVQQS--------QAQSHTQVLSTQQIP 698


>emb|CBI22860.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  318 bits (815), Expect = 3e-84
 Identities = 171/284 (60%), Positives = 201/284 (70%), Gaps = 5/284 (1%)
 Frame = +3

Query: 297  GGRDGSRPMEDSSGKPPFSFSGVRG--DNTDNGGYAKLFVASVPRKATEEDIRSLFEEHG 470
            GG   +  +  S  K  F F G  G  D  D GG+AKLFV SVPR ATEEDIR LFEEHG
Sbjct: 6    GGFASNYQVPLSGQKRGFGFPGRGGSPDRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHG 65

Query: 471  NVVEVVFIKDKRTGHQQRCCFVKYASFEDAERAIKALDNQYTFPGEFGPIEVRYADRERG 650
            NV+EV  IKDKRTG QQ CCF+KYA+ E+AERAI+AL NQYT PG  GPI+VRYAD ER 
Sbjct: 66   NVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHNQYTLPGGVGPIQVRYADGERE 125

Query: 651  RLPASEMKLFVTGLNKQATEKEIEEIFSPYGRVEDIFILYDEMKLSRGIAFVEFSHKDMA 830
            RL A E KLFV  LNKQATEKE++EIFSPYG+VED++++ DE+K SRG  FV+FSH+DMA
Sbjct: 126  RLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMA 185

Query: 831  VAAINALHGSYVVTGCHMPLIVRFAVPKRPKAGELRSDTAFRGSGFGPQAHSSLGIRSEP 1010
            +AAINAL+G Y + GC  PL VRFA PKRP+ GE R   AF G GFGP+  +  G+R   
Sbjct: 186  MAAINALNGIYTMRGCDQPLTVRFADPKRPRPGESRGAPAFGGPGFGPRFQAP-GVRPTM 244

Query: 1011 NQGDRTG-GHIQPNASWKTSPHSSGPSSQA--HDFACHSVAKTG 1133
            NQGD  G G I PNA    SP + GPSS A  H F   S+ ++G
Sbjct: 245  NQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSG 288



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = +3

Query: 1212 IPFRTHASTHPTFEWSEHTCPDGFNYYYNCITKESRWEEPEDLTYFKQQELSVWNVKVQS 1391
            +P  T A       W+EHT PDG+ YY+N +T ESRWE+PE+LT  +QQ+      + +S
Sbjct: 547  VPVTTQAVAPVKCNWTEHTSPDGYKYYHNSVTGESRWEKPEELTLLEQQQ-----QQQKS 601

Query: 1392 KVQNSVTSTAFVNQSHSNTTGSSSRKIP 1475
             VQ S        Q+ S+T   S+++IP
Sbjct: 602  SVQQS--------QAQSHTQVLSTQQIP 621


>ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
            gi|223541567|gb|EEF43116.1| Flowering time control
            protein FCA, putative [Ricinus communis]
          Length = 811

 Score =  302 bits (774), Expect = 2e-79
 Identities = 159/280 (56%), Positives = 194/280 (69%), Gaps = 4/280 (1%)
 Frame = +3

Query: 315  RPMEDSSGKPPFSFSGVRGDNTDNGGYAKLFVASVPRKATEEDIRSLFEEHGNVVEVVFI 494
            +P+       PFS  G   D+T+ G +AKLFV SVPR A+EEDIR LFE+HGNV+EV  I
Sbjct: 134  QPLSGQKRGFPFSGRGNSPDHTECGSFAKLFVGSVPRTASEEDIRPLFEQHGNVIEVALI 193

Query: 495  KDKRTGHQQRCCFVKYASFEDAERAIKALDNQYTFPGEFGPIEVRYADRERGRLPASEMK 674
            KDKRTG QQ CCFVKYA+ E+A+RAI+AL NQ+T PG  GPI+VR+AD ER RL A E K
Sbjct: 194  KDKRTGQQQGCCFVKYATSEEADRAIRALHNQHTLPGGIGPIQVRFADGERERLGAVEYK 253

Query: 675  LFVTGLNKQATEKEIEEIFSPYGRVEDIFILYDEMKLSRGIAFVEFSHKDMAVAAINALH 854
            LFV  LNKQATEKE+EEIFSPYG VED++++ DEMK SRG  FV++S ++MA+AAINAL+
Sbjct: 254  LFVGSLNKQATEKEVEEIFSPYGHVEDVYLMRDEMKQSRGCGFVKYSSREMALAAINALN 313

Query: 855  GSYVVTGCHMPLIVRFAVPKRPKAGELRSDTAFRGSGFGPQAHSSLGIRSEPNQGDRTGG 1034
            G Y + GC  PL VRFA PKRP+ G+ R   AF G GFGP+  +  G R  PN GD  G 
Sbjct: 314  GIYKMRGCDQPLTVRFADPKRPRPGDSRGGPAFGGPGFGPRFQAP-GPRLPPNFGDAVGD 372

Query: 1035 HIQPNASWKTSPHSSGPSSQA--HDFACHSVAKTG--AAP 1142
             + P+A    SP   GPS  A  H F    + + G  AAP
Sbjct: 373  RVPPSAWRPMSPQDMGPSPNAAIHGFGSQLIPRPGELAAP 412



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +3

Query: 1254 WSEHTCPDGFNYYYNCITKESRWEEPEDLTYFKQQ 1358
            W+EHT P+GF YYYN +T+ESRWE+PE+LT F+QQ
Sbjct: 649  WTEHTSPEGFKYYYNSVTRESRWEKPEELTLFEQQ 683


>ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|222865091|gb|EEF02222.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  296 bits (759), Expect = 9e-78
 Identities = 157/263 (59%), Positives = 185/263 (70%), Gaps = 9/263 (3%)
 Frame = +3

Query: 372  DNTDNGG------YAKLFVASVPRKATEEDIRSLFEEHGNVVEVVFIKDKRTGHQQRCCF 533
            D  D GG      +AKLFV SVPR ATE DIR LFEEHGNV+EV  IKDKRTG QQ CCF
Sbjct: 74   DRFDGGGGRSGFAFAKLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCF 133

Query: 534  VKYASFEDAERAIKALDNQYTFPGEFGPIEVRYADRERGRLPASEMKLFVTGLNKQATEK 713
            +KYA+ E+A+RAI+AL NQ T PG  GPI+VRYAD ER RL A E KLFV  LNKQATEK
Sbjct: 134  IKYATSEEADRAIRALHNQRTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEK 193

Query: 714  EIEEIFSPYGRVEDIFILYDEMKLSRGIAFVEFSHKDMAVAAINALHGSYVVTGCHMPLI 893
            E+EEIF+PYGRVED++++ DEMK SRG  FV++SH+DMA+AAIN L+G Y + GC  PL 
Sbjct: 194  EVEEIFTPYGRVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLT 253

Query: 894  VRFAVPKRPK-AGELRSDTAFRGSGFGPQAHSSLGIRSEPNQGDRTGGHIQPNASWKTSP 1070
            VRFA PKRP+  G+ R   AF   G GP+  +S G+R  PN GD  G HI PNA    SP
Sbjct: 254  VRFADPKRPRPGGDSRGGPAFGSPGAGPRFQAS-GLRPPPNLGDPMGDHIPPNAWLPMSP 312

Query: 1071 HSSGPSSQA--HDFACHSVAKTG 1133
             + GPSS A  H F      ++G
Sbjct: 313  QNMGPSSNAGVHGFGNQLPPRSG 335


>ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
          Length = 737

 Score =  288 bits (738), Expect = 3e-75
 Identities = 155/272 (56%), Positives = 188/272 (69%), Gaps = 4/272 (1%)
 Frame = +3

Query: 294  FGGRDGSRPMEDSSGKPPFSFSGVRG---DNTDNGGYAKLFVASVPRKATEEDIRSLFEE 464
            F G     P+  +  K  F FSG  G   D+ D G +AKLFV SVPR ATEEDIR LFEE
Sbjct: 51   FNGHQAPPPL--AGQKRGFPFSGRGGGSPDHLDGGNFAKLFVGSVPRTATEEDIRPLFEE 108

Query: 465  HGNVVEVVFIKDKRTGHQQRCCFVKYASFEDAERAIKALDNQYTFPGEFGPIEVRYADRE 644
            HGNV+EV  IKDK+TG  Q CCF+KYA+ E+A++AI+AL NQ+T PG  GPI+VRYAD E
Sbjct: 109  HGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGE 168

Query: 645  RGRLPASEMKLFVTGLNKQATEKEIEEIFSPYGRVEDIFILYDEMKLSRGIAFVEFSHKD 824
            R RL A E KLFV  LNKQAT KE+EEIFS YGRVED++++ DE K SRG  FV++SH+D
Sbjct: 169  RERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRD 228

Query: 825  MAVAAINALHGSYVVTGCHMPLIVRFAVPKRPKAGELRSDTAFRGSGFGPQAHSSLGIRS 1004
            MA+AAINAL+G Y + GC  PLIVRFA PKRP+ G+ R   AF G GFGP+   + G R 
Sbjct: 229  MALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDSRG-LAFGGPGFGPR-FDAPGTRH 286

Query: 1005 EPNQGDRTGGHIQPNASW-KTSPHSSGPSSQA 1097
              N  D  G  + P+ +W    P + GPSS A
Sbjct: 287  PSNITDPMGDRMPPSNAWHPLHPPNMGPSSNA 318



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = +3

Query: 1254 WSEHTCPDGFNYYYNCITKESRWEEPEDLTYFKQQELSVWNVKVQSKVQN 1403
            W+EH  P+GF YYYN +T ESRWE+PE+LT  +QQ+        QS+ Q+
Sbjct: 596  WTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQRPSVQQSQTQS 645