BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006784
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloro...   510   e-142
ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloro...   493   e-137
emb|CBI32677.3| unnamed protein product [Vitis vinifera]              484   e-134
ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus...   483   e-134
ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana...   476   e-132

>ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloroplastic [Vitis vinifera]
          Length = 370

 Score =  510 bits (1313), Expect = e-142
 Identities = 265/371 (71%), Positives = 289/371 (77%), Gaps = 12/371 (3%)
 Frame = -3

Query: 1269 MAMKAIISLPLISSSRHSRT-------SLKPFQSPPQLHVITSRPFL-----RNPTSRVS 1126
            MA+ A ISLPL S +RHS T       ++ P  S     V  S   L     RNP  RVS
Sbjct: 1    MAIAATISLPLTSPTRHSVTRRSITSLNVSPSSSSSSSSVQPSFLTLETVAFRNPNFRVS 60

Query: 1125 ASSMSIEEAPLKTLKSSFLDRKESRILHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKL 946
            A+SMSIE A  K  ++SFLDRKES  LHFVKYHGLGNDFILVDNRDS EPK+TPEQAVKL
Sbjct: 61   ATSMSIE-ALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKL 119

Query: 945  CDRNFGVGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFITELDDLQGRN 766
            CDRNFG+GADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFI EL++L G+ 
Sbjct: 120  CDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQ 179

Query: 765  SFTVHTGAGLIVPEIQDDGKVRVDMGQPVLTASVVPTKLSATKDQAVVGAALEVDGVIWN 586
            SFT+HTGAGLIVPEIQDDGKV+VDMG+P+L A  VPTKL A KDQ+VV + L VDGV WN
Sbjct: 180  SFTLHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELNVDGVSWN 239

Query: 585  VTCVSMGNPHCVTFGTKQCQTLQVDNLELPDIGPKFEHHEVFPARTNTEFVQVFSRSHLK 406
            VTCVSMGNPHCVTFGTK  Q LQVD L L DIGPKFEHH +FPARTNTEFVQV SRSHLK
Sbjct: 240  VTCVSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQVISRSHLK 299

Query: 405  MRVWERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEKDNHVYMTGP 226
            MRVWER                   VLEG + RSCTVDLPGGPL+IEW+E+DNHVYMTGP
Sbjct: 300  MRVWERGAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIEWREEDNHVYMTGP 359

Query: 225  AEVVFYGSAPL 193
            AE+VFYGS PL
Sbjct: 360  AEIVFYGSVPL 370


>ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Cucumis
            sativus]
          Length = 364

 Score =  493 bits (1268), Expect = e-137
 Identities = 250/364 (68%), Positives = 283/364 (77%), Gaps = 5/364 (1%)
 Frame = -3

Query: 1269 MAMKAIISLPLISSSRHSRTSLKP----FQSPPQLHVITSRPFL-RNPTSRVSASSMSIE 1105
            MA+  IISLPL S S  S  S+      F S  QL  +       R+P   VSA+S  +E
Sbjct: 1    MAVATIISLPLTSPSSRSLASIPSLRLSFTSSLQLDSLPKYSARGRSPRLSVSATSAGLE 60

Query: 1104 EAPLKTLKSSFLDRKESRILHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 925
                K    SFLDR+ES +LHFVKYHGLGNDFILVDNRDS EP++TPEQA KLCDRNFG+
Sbjct: 61   VTE-KAPSFSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGI 119

Query: 924  GADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFITELDDLQGRNSFTVHTG 745
            GADGVIFAMPG+NGTDYTMRIFNSDGSEPEMCGNGVRCFARFI EL++LQGR+SFTVHTG
Sbjct: 120  GADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTG 179

Query: 744  AGLIVPEIQDDGKVRVDMGQPVLTASVVPTKLSATKDQAVVGAALEVDGVIWNVTCVSMG 565
            AGLI+PE+QDDG+V+VDMG+P+L A+ VPT+L+ TKDQ+VV AA+EVDGV W+VTCVSMG
Sbjct: 180  AGLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMG 239

Query: 564  NPHCVTFGTKQCQTLQVDNLELPDIGPKFEHHEVFPARTNTEFVQVFSRSHLKMRVWERX 385
            NPHCVTF  K  Q LQVD + L  IGPKFEHHE+FPARTNTEFVQV S SHLKMRVWER 
Sbjct: 240  NPHCVTFSNKIEQNLQVDGINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERG 299

Query: 384  XXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEKDNHVYMTGPAEVVFYG 205
                              VLEGR+ R+CTVDLPGGPL+IEW E+DNHVYMTGPAEVVFYG
Sbjct: 300  AGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEEDNHVYMTGPAEVVFYG 359

Query: 204  SAPL 193
            S PL
Sbjct: 360  SVPL 363


>emb|CBI32677.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  484 bits (1246), Expect = e-134
 Identities = 239/308 (77%), Positives = 258/308 (83%)
 Frame = -3

Query: 1116 MSIEEAPLKTLKSSFLDRKESRILHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDR 937
            MSIE A  K  ++SFLDRKES  LHFVKYHGLGNDFILVDNRDS EPK+TPEQAVKLCDR
Sbjct: 1    MSIE-ALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDR 59

Query: 936  NFGVGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFITELDDLQGRNSFT 757
            NFG+GADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFI EL++L G+ SFT
Sbjct: 60   NFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQSFT 119

Query: 756  VHTGAGLIVPEIQDDGKVRVDMGQPVLTASVVPTKLSATKDQAVVGAALEVDGVIWNVTC 577
            +HTGAGLIVPEIQDDGKV+VDMG+P+L A  VPTKL A KDQ+VV + L VDGV WNVTC
Sbjct: 120  LHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELNVDGVSWNVTC 179

Query: 576  VSMGNPHCVTFGTKQCQTLQVDNLELPDIGPKFEHHEVFPARTNTEFVQVFSRSHLKMRV 397
            VSMGNPHCVTFGTK  Q LQVD L L DIGPKFEHH +FPARTNTEFVQV SRSHLKMRV
Sbjct: 180  VSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQVISRSHLKMRV 239

Query: 396  WERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEKDNHVYMTGPAEV 217
            WER                   VLEG + RSCTVDLPGGPL+IEW+E+DNHVYMTGPAE+
Sbjct: 240  WERGAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIEWREEDNHVYMTGPAEI 299

Query: 216  VFYGSAPL 193
            VFYGS PL
Sbjct: 300  VFYGSVPL 307


>ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus communis]
            gi|223527214|gb|EEF29378.1| Diaminopimelate epimerase,
            putative [Ricinus communis]
          Length = 369

 Score =  483 bits (1243), Expect = e-134
 Identities = 247/370 (66%), Positives = 281/370 (75%), Gaps = 13/370 (3%)
 Frame = -3

Query: 1263 MKAIISLPLISSSRHSRTSLKPFQSP--------PQLHVITSRPFL--RNPTSR---VSA 1123
            M A +S     S+RH  TS+  F+S         P     + +P +  +NP  R   VSA
Sbjct: 1    MAATVSSAFTPSTRHHLTSVTRFRSLYLSNSISLPNFKSNSVKPLISSKNPNFRLLLVSA 60

Query: 1122 SSMSIEEAPLKTLKSSFLDRKESRILHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLC 943
            +SMS E AP K   +SFLDR+ES I HFVKY GLGNDFILVDNRDS EP++TPEQAV+LC
Sbjct: 61   ASMSAE-APEKISTASFLDRRESGIHHFVKYQGLGNDFILVDNRDSTEPRITPEQAVRLC 119

Query: 942  DRNFGVGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFITELDDLQGRNS 763
            DRNFG+GADGVIFAMPG NGTDY+MRIFNSDGSEPEMCGNGVRCFARFI EL++LQG+ S
Sbjct: 120  DRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKQS 179

Query: 762  FTVHTGAGLIVPEIQDDGKVRVDMGQPVLTASVVPTKLSATKDQAVVGAALEVDGVIWNV 583
            FT+HTGAGLIVPEIQ+DGKV+VDMG+P+L AS VPT+L   K  AVV A L +DGV WNV
Sbjct: 180  FTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLRENKGDAVVKAKLNIDGVTWNV 239

Query: 582  TCVSMGNPHCVTFGTKQCQTLQVDNLELPDIGPKFEHHEVFPARTNTEFVQVFSRSHLKM 403
            TCVSMGNPHCVTFG+ + Q LQVD L L +IGPKFEHH+VFPARTNTEFVQV S SHLKM
Sbjct: 240  TCVSMGNPHCVTFGSNENQDLQVDKLNLAEIGPKFEHHDVFPARTNTEFVQVHSHSHLKM 299

Query: 402  RVWERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEKDNHVYMTGPA 223
            RVWER                   VLEGR+ R+CTVDLPGGPLEIEWKE+DNHVYMTGPA
Sbjct: 300  RVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLEIEWKEEDNHVYMTGPA 359

Query: 222  EVVFYGSAPL 193
            E VFYG+  L
Sbjct: 360  EAVFYGAVAL 369


>ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana]
            gi|75263858|sp|Q9LFG2.1|DAPF_ARATH RecName:
            Full=Diaminopimelate epimerase, chloroplastic; Short=DAP
            epimerase; Flags: Precursor gi|6729509|emb|CAB67665.1|
            diaminopimelate epimerase-like protein [Arabidopsis
            thaliana] gi|22022530|gb|AAM83223.1| AT3g53580/F4P12_280
            [Arabidopsis thaliana] gi|23505901|gb|AAN28810.1|
            At3g53580/F4P12_280 [Arabidopsis thaliana]
            gi|332645592|gb|AEE79113.1| diaminopimelate epimerase
            [Arabidopsis thaliana]
          Length = 362

 Score =  476 bits (1226), Expect = e-132
 Identities = 230/319 (72%), Positives = 261/319 (81%)
 Frame = -3

Query: 1149 RNPTSRVSASSMSIEEAPLKTLKSSFLDRKESRILHFVKYHGLGNDFILVDNRDSLEPKV 970
            ++P+ RVSA++        K   +SFLD+KE+ +LHFVKYHGLGNDFILVDNRDS EPK+
Sbjct: 44   KSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKI 103

Query: 969  TPEQAVKLCDRNFGVGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFITE 790
            T EQA KLCDRNFGVGADGVIFAMPG+NGTDY MRIFNSDGSEPEMCGNGVRCFARFI E
Sbjct: 104  TQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAE 163

Query: 789  LDDLQGRNSFTVHTGAGLIVPEIQDDGKVRVDMGQPVLTASVVPTKLSATKDQAVVGAAL 610
            L++LQG++SFT+HTGAGLIVPEIQDDG+V+VDMG P+L A  VPTKLS  K +AVV A L
Sbjct: 164  LENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAEL 223

Query: 609  EVDGVIWNVTCVSMGNPHCVTFGTKQCQTLQVDNLELPDIGPKFEHHEVFPARTNTEFVQ 430
             VDGV WNVTCVSMGNPHC+TFG K    L+VD+L LP+IGPKFEHHE+FPARTNTEFV+
Sbjct: 224  VVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVE 283

Query: 429  VFSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRSERSCTVDLPGGPLEIEWKEKD 250
            V SRSHLKMRVWER                   VLEGR++R CTVDLPGGPLEIEWK++D
Sbjct: 284  VLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQED 343

Query: 249  NHVYMTGPAEVVFYGSAPL 193
            NH+YMTGPAE VFYGSA L
Sbjct: 344  NHIYMTGPAEAVFYGSALL 362