BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006761
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   142   3e-32
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   140   8e-32
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum...   137   9e-31
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   136   2e-30
gb|AFO67221.1| putative chlorophyll a/b binding protein, partial...   135   3e-30

>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 MAASTMALSSPSLAGKAVKVAPSASEVFGEGRITMRKTVGKPKTV-SSSPWYGPDRVKYL 57
           MA+STMALSSPSLAGKAVK+ P+ASE+ GEGRITMRKT GKPKTV SSSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 56  GPFSGEAPSYLTGEFPGD 3
           GPFSGE+PSYLTGEFPGD
Sbjct: 61  GPFSGESPSYLTGEFPGD 78


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/78 (85%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 MAASTMALSSPSLAGKAVKVAPSASEVFGEGRITMRKTVGKPKTVSS-SPWYGPDRVKYL 57
           MA+STMALSSPSLAGKA+K+ P+ASE+ GEGR+TMRKT GKPK VSS SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 56  GPFSGEAPSYLTGEFPGD 3
           GPFSGEAPSYLTGEFPGD
Sbjct: 61  GPFSGEAPSYLTGEFPGD 78


>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/78 (85%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 MAASTMALSSPSLAGKAVKVAPSASEVFGEGRITMRKTVGKPKTVSS-SPWYGPDRVKYL 57
           MA+STMALSSPSLAGK VK+AP+ASE+ GEGRITMRKT GK K+VSS SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKMVKLAPTASEILGEGRITMRKTAGKTKSVSSDSPWYGPDRVKYL 60

Query: 56  GPFSGEAPSYLTGEFPGD 3
           GPFSGE+PSYLTGEFPGD
Sbjct: 61  GPFSGESPSYLTGEFPGD 78


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/78 (83%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 MAASTMALSSPSLAGKAVKVAPSASEVFGEGRITMRKTVGKPKTVSS-SPWYGPDRVKYL 57
           MAASTMALSSPSLAG+A+K+APS+S++ GEGR+TMRKT G+PK VSS SPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 56  GPFSGEAPSYLTGEFPGD 3
           GPFSGE PSYLTGEFPGD
Sbjct: 61  GPFSGEPPSYLTGEFPGD 78


>gb|AFO67221.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
          Length = 152

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/77 (85%), Positives = 69/77 (89%)
 Frame = -3

Query: 233 MAASTMALSSPSLAGKAVKVAPSASEVFGEGRITMRKTVGKPKTVSSSPWYGPDRVKYLG 54
           MAASTMALSSPS AGKAVKVAPS+SE+FG GRI+MRKT  KP   S SPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSFAGKAVKVAPSSSELFGNGRISMRKTGKKPVASSGSPWYGPDRVKYLG 60

Query: 53  PFSGEAPSYLTGEFPGD 3
           PFSGEAPSYLTGEFPGD
Sbjct: 61  PFSGEAPSYLTGEFPGD 77