BLASTX nr result

ID: Cimicifuga21_contig00006733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006733
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   445   e-122
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   424   e-116
ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   418   e-114
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...   412   e-112
ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...   404   e-110

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
            gi|296081277|emb|CBI17721.3| unnamed protein product
            [Vitis vinifera]
          Length = 774

 Score =  445 bits (1144), Expect = e-122
 Identities = 217/390 (55%), Positives = 281/390 (72%)
 Frame = -1

Query: 1171 VAMKLTLLCKGDGFHFPPCYMLDLCGFHILLDCPIDLSALKVFSPITSHSYQVPDVEDTE 992
            V MK T L KG  F+FPPC+++ + GF ILLDCP+DLS+L +FSPI +H++  P++   +
Sbjct: 80   VYMKFTCLSKGGNFYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHAFSNPELPSPD 139

Query: 991  SLEAKSSGSEDHEPKRQKVEKALEAKDLICAEPWFKTVTNLHLWDISFIDIVLISRPMGM 812
            S++ K          RQK E+ +++ +LI A+PWFKTVT+LHLW++ FID+VLIS PMGM
Sbjct: 140  SVDQK----------RQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGM 189

Query: 811  LGLPFLTRSKNFSAKIYASEATTRIGKLLMEDLVSMHMEFRQFYGPEESGCPKWMKWDEI 632
            LGLPFL+R   F AKIY +E T RIG+LLMEDLV M+ EFRQFYG EESG P+WM W+++
Sbjct: 190  LGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWMNWEKL 249

Query: 631  ELLPIALKEILMGEDGAALGSWEPLYSTADVKDCMQKFKTLKYAEETCYNDTLILKAFSS 452
            E LP   +EI++GEDG  LG W PLYS  DVK CMQK  TLKYA+E CYN TLI+KA SS
Sbjct: 250  ESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCMQKVHTLKYAQEVCYNGTLIIKAVSS 309

Query: 451  GLEIGASNWTINGPRRSVTYLSSSIFESAHAMNFDYHSLCGNDVVLFSDFSPLNGTISAS 272
            GLEIG  NWTINGP+R++  LSSSIF S+HAMNFDYH+L GND++++SD S         
Sbjct: 310  GLEIGTCNWTINGPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDLSSPVLEDVKD 369

Query: 271  NDANIGEITQDHQTTETDGFTVLRDELKNEEEIIKTDESSEEMDKIAFICSCAVDSVKQG 92
            N       +Q   T   D      D+  + E ++ T ES EEM+K+ FICSC +DSVK G
Sbjct: 370  NSCYSAPTSQKSSTLSAD-----NDQEASAELLLSTSESLEEMEKLNFICSCIIDSVKAG 424

Query: 91   GSVLVPFGRIGVVLQLLEQISIWLESSNLE 2
            GSVL+P GR+G++LQLLE IS+ LE+S+L+
Sbjct: 425  GSVLIPIGRLGIILQLLELISLSLEASSLK 454


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
            gi|223540437|gb|EEF42006.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 705

 Score =  424 bits (1091), Expect = e-116
 Identities = 214/395 (54%), Positives = 280/395 (70%), Gaps = 7/395 (1%)
 Frame = -1

Query: 1165 MKLTLLCKGDGFHFPPCYMLDLCGFHILLDCPIDLSALKVFSPITSHSYQVPDVEDTESL 986
            MK T L KG+GFHFPPC +LD+ G+ IL DCP+DLS+L +FSP+ +    +   E     
Sbjct: 1    MKFTCLSKGNGFHFPPCCILDMSGYRILFDCPLDLSSLTIFSPVPADFCPILPEEHPNCS 60

Query: 985  EAKSSGSEDHEPKRQKVEKALEAKDLICAEPWFKTVTNLHLWDISFIDIVLISRPMGMLG 806
               S   E    K   +EK L+ ++LI AEPW+KT  NLHLWD S IDIVLIS  MGMLG
Sbjct: 61   LHDSLRVELETGKMWGMEKPLDVQNLIYAEPWYKTAKNLHLWDPSSIDIVLISSTMGMLG 120

Query: 805  LPFLTRSKNFSAKIYASEATTRIGKLLMEDLVSMHMEFRQFYGPEESGCPKWMKWDEIEL 626
            LPFLT+ K FSAKIYA+EAT R+G+L+MEDLVSMH+EFRQFYG EES  P+WM+W+E+EL
Sbjct: 121  LPFLTQCKGFSAKIYATEATARVGQLIMEDLVSMHVEFRQFYGSEESD-PQWMRWEELEL 179

Query: 625  LPIALKEILMGEDGAALGSWEPLYSTADVKDCMQKFKTLKYAEETCYNDTLILKAFSSGL 446
            LP  L+E+ +G+DG+ LG+W PLYS+ DVKDCMQK + LKYAE  CYN  L++KAFSSG+
Sbjct: 180  LPSELREVTLGKDGSELGAWFPLYSSVDVKDCMQKIEMLKYAEAACYNGELVIKAFSSGI 239

Query: 445  EIGASNWTINGPRRSVTYLSSSIFESAHAMNFDYHSLCGNDVVLFSDFSPLNGTISASND 266
            EIG+ NW I GP+ ++ ++SSSIF S HAM FDYH+L G D++L+SDFS           
Sbjct: 240  EIGSCNWLIEGPKENMAWVSSSIFLSTHAMEFDYHALRGTDLILYSDFS----------S 289

Query: 265  ANIGEITQDHQT---TETDGFTVLRDELKNEEE----IIKTDESSEEMDKIAFICSCAVD 107
             ++ E  + H++   +     + L  +  N +E    ++  DES EE DK+AF+CSC V 
Sbjct: 290  QDVIEDVEQHESYFVSANHNLSSLSADGDNWKELNDCLLSNDESIEESDKLAFLCSCVVG 349

Query: 106  SVKQGGSVLVPFGRIGVVLQLLEQISIWLESSNLE 2
            SVK GGSVLVP  R+G+++QLLEQISI+LESS ++
Sbjct: 350  SVKAGGSVLVPLNRLGIIMQLLEQISIFLESSAIK 384


>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
            [Glycine max]
          Length = 794

 Score =  418 bits (1075), Expect = e-114
 Identities = 212/392 (54%), Positives = 274/392 (69%), Gaps = 5/392 (1%)
 Frame = -1

Query: 1168 AMKLTLLCKGDGFHFPPCYMLDLCGFHILLDCPIDLSALKVFSPITSHSYQVPDVEDTES 989
            +MK T L KG GFHFPPC+ML+ CG  ILLDCP+DLSAL  FSP+ +    +P VE++ +
Sbjct: 87   SMKFTCLSKGGGFHFPPCHMLNFCGIRILLDCPLDLSALMAFSPVPTALDCLP-VEESYN 145

Query: 988  LEAKSS-GSEDHEPKRQKVEKALEAKDLICAEPWFKTVTNLHLWDISFIDIVLISRPMGM 812
             EA +   S     KRQK+E  L+AK L+ AEPW+KTV NLHLW+ SFID+VLIS PMG+
Sbjct: 146  TEANAFFDSRFGSGKRQKIENLLDAKSLLFAEPWYKTVNNLHLWNASFIDVVLISSPMGI 205

Query: 811  LGLPFLTRSKNFSAKIYASEATTRIGKLLMEDLVSMHMEFRQFYGPEESGCPKWMKWDEI 632
            +GLPFLTR+K FSAKIY +EA+ RIG+L+MEDLVSMH EFRQFYGP ES  P W++ +E+
Sbjct: 206  MGLPFLTRTKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPGESNFPSWLRHEEL 265

Query: 631  ELLPIALKEILMGEDGAALGSWEPLYSTADVKDCMQKFKTLKYAEETCYNDTLILKAFSS 452
            E+LP  L+E+++G+DG  LG W PLYS ADVKD M K  T+ YAEE C+N TL++KAFSS
Sbjct: 266  EVLPSELRELILGKDGVELGGWMPLYSAADVKDFMLKIHTVNYAEEVCFNGTLVIKAFSS 325

Query: 451  GLEIGASNWTINGPRRSVTYLSSSIFESAHAMNFDYHSLCGNDVVLFSDFSPLNGTISAS 272
            G+EIG+ NW +N P+  + YLS S F SAHAM FDYHSL G  V+++SDF  L  T    
Sbjct: 326  GIEIGSCNWILNSPKGDIAYLSGSSFISAHAMPFDYHSLQGTCVLIYSDFLSLGDTQDGE 385

Query: 271  NDANIGEITQDH----QTTETDGFTVLRDELKNEEEIIKTDESSEEMDKIAFICSCAVDS 104
            N  N    T D      + +  GF        N   +    E SEE +K+ FICS A++ 
Sbjct: 386  NGDNYSVSTADKLLPISSQDLAGF--------NHNSV----EYSEEKEKLVFICSHAMEH 433

Query: 103  VKQGGSVLVPFGRIGVVLQLLEQISIWLESSN 8
            +KQGGSVL+PF R+G +L LLE+++  LE+S+
Sbjct: 434  IKQGGSVLIPFDRLGTILLLLEEMTASLEASD 465


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
            lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
            ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  412 bits (1059), Expect = e-112
 Identities = 211/396 (53%), Positives = 273/396 (68%), Gaps = 8/396 (2%)
 Frame = -1

Query: 1165 MKLTLLCKGDGFHFPPCYMLDLCGFHILLDCPIDLSALKVFSPITSH-SYQVPDVEDTES 989
            MKLT L KGDGFH+PPC+ML+LCGF IL+DCP+DLSA+K+FSP+ S  + +       ES
Sbjct: 1    MKLTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVISCVASEASKYPSDES 60

Query: 988  LEAKSSGSEDHEPKRQKVEKALEAKDLICAEPWFKTVTNLHLWDISFIDIVLISRPMGML 809
            L+A++   + H     K+E+ L   DL+C EPW+KTV  LHLWD SFIDIVLIS PMG+L
Sbjct: 61   LDAQNPIQKKH-----KLERQLTFADLVCEEPWYKTVKPLHLWDASFIDIVLISNPMGLL 115

Query: 808  GLPFLTRSKNFSAKIYASEATTRIGKLLMEDLVSMHMEFRQFYGPEESGCPKWMKWDEIE 629
            GLPFLT++  FSAKIY +EAT +IG+L+MEDLVSMH EFR F+GP+ S  P W+K  + E
Sbjct: 116  GLPFLTQNPGFSAKIYMTEATAKIGQLMMEDLVSMHAEFRCFHGPDNSSFPGWIKNLDRE 175

Query: 628  LLPIALKEILMGEDGAALGSWEPLYSTADVKDCMQKFKTLKYAEETCYNDTLILKAFSSG 449
             +P  LK+++ GE G  LGSW  LYS  D++ CM+K + +K+AEE CYN TLI+KA SSG
Sbjct: 176  QVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQAVKFAEEVCYNGTLIIKALSSG 235

Query: 448  LEIGASNWTINGPRRSVTYLSSSIFESAHAMNFDYHSLCGNDVVLFSDFSPL-------N 290
            L+IGA NW INGP  S++Y+S SIF S HA NFD+H L G DV+++SDFS L       N
Sbjct: 236  LDIGACNWLINGPNGSLSYVSDSIFVSHHARNFDFHGLKGTDVLIYSDFSSLQSAEVTEN 295

Query: 289  GTISASNDANIGEITQDHQTTETDGFTVLRDELKNEEEIIKTDESSEEMDKIAFICSCAV 110
            G IS   D N    T D                 N++ ++ T++S EEM+K+ FICSCA 
Sbjct: 296  GCISPDPDNNYISTTSD-----------------NKDSLLNTEDSLEEMEKLEFICSCAA 338

Query: 109  DSVKQGGSVLVPFGRIGVVLQLLEQISIWLESSNLE 2
            +S   GGS L+   RIG+VLQLLE +S  LESS+L+
Sbjct: 339  ESADAGGSTLITITRIGIVLQLLELMSNSLESSSLK 374


>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
            gi|332641036|gb|AEE74557.1| integrator complex subunit 9
            [Arabidopsis thaliana]
          Length = 699

 Score =  404 bits (1039), Expect = e-110
 Identities = 200/388 (51%), Positives = 271/388 (69%)
 Frame = -1

Query: 1165 MKLTLLCKGDGFHFPPCYMLDLCGFHILLDCPIDLSALKVFSPITSHSYQVPDVEDTESL 986
            M+LT L KGDGFH+PPC+ML+LCGF IL+DCP+DLSA+K+FSP+ S        E +E L
Sbjct: 1    MELTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVPSGVGS----EASEYL 56

Query: 985  EAKSSGSEDHEPKRQKVEKALEAKDLICAEPWFKTVTNLHLWDISFIDIVLISRPMGMLG 806
              +S  +++   K+QK+E+ L   DL+C EPW+KTV  LHLW+ SFIDIVLIS PMG+LG
Sbjct: 57   SDESLDAQNPIQKKQKLERQLTCADLVCEEPWYKTVKALHLWEASFIDIVLISNPMGLLG 116

Query: 805  LPFLTRSKNFSAKIYASEATTRIGKLLMEDLVSMHMEFRQFYGPEESGCPKWMKWDEIEL 626
            LPFLT++  F AKIY +E T +IG+L+MED+VSMH EFR F+GP+ S  P W+K  + E 
Sbjct: 117  LPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWIKNLDSEQ 176

Query: 625  LPIALKEILMGEDGAALGSWEPLYSTADVKDCMQKFKTLKYAEETCYNDTLILKAFSSGL 446
            +P  LK+++ GE G  LGSW  LYS  D++ CM+K + +K+AEE CYN TLI+KA SSGL
Sbjct: 177  VPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLIIKALSSGL 236

Query: 445  EIGASNWTINGPRRSVTYLSSSIFESAHAMNFDYHSLCGNDVVLFSDFSPLNGTISASND 266
            +IGA NW INGP  S++Y+S SIF S HA +FD+H L   DV+++SDFS L         
Sbjct: 237  DIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQS------- 289

Query: 265  ANIGEITQDHQTTETDGFTVLRDELKNEEEIIKTDESSEEMDKIAFICSCAVDSVKQGGS 86
                E+T+D   +       +     N++ ++ T++S EEM+K+AF+CSCA +S   GGS
Sbjct: 290  ---AEVTEDGCISPDSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGS 346

Query: 85   VLVPFGRIGVVLQLLEQISIWLESSNLE 2
             L+   RIG+VLQLLE +S  LESS+L+
Sbjct: 347  TLITITRIGIVLQLLELLSNSLESSSLK 374


Top