BLASTX nr result

ID: Cimicifuga21_contig00006710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006710
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325493.1| predicted protein [Populus trichocarpa] gi|1...    96   1e-17
ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase ...    86   7e-15
ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase ...    84   4e-14
ref|NP_001060644.1| Os07g0680300 [Oryza sativa Japonica Group] g...    82   1e-13
sp|P48505.2|UCR11_SOLTU RecName: Full=Ubiquinol-cytochrome c red...    80   5e-13

>ref|XP_002325493.1| predicted protein [Populus trichocarpa] gi|118482907|gb|ABK93367.1|
           unknown [Populus trichocarpa]
           gi|118483491|gb|ABK93644.1| unknown [Populus
           trichocarpa] gi|118487244|gb|ABK95450.1| unknown
           [Populus trichocarpa] gi|118488463|gb|ABK96046.1|
           unknown [Populus trichocarpa]
           gi|222862368|gb|EEE99874.1| predicted protein [Populus
           trichocarpa]
          Length = 59

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +2

Query: 197 SSLFKSIRPKLRIQSTDIQAAALWGVAAGTTALWLVQPFDWIKKTFFEKPATEEK 361
           +++FK + P+LR+QSTDIQ AA WGVAAGTTALWLVQPFDWIKKTFFEK  TEEK
Sbjct: 5   NAMFKFLSPRLRLQSTDIQTAAFWGVAAGTTALWLVQPFDWIKKTFFEKANTEEK 59


>ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
           protein-like [Cucumis sativus]
           gi|449529780|ref|XP_004171876.1| PREDICTED:
           ubiquinol-cytochrome c reductase complex 6.7 kDa
           protein-like [Cucumis sativus]
          Length = 57

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = +2

Query: 197 SSLFKSIRPKLRIQSTDIQAAALWGVAAGTTALWLVQPFDWIKKTFFEKP 346
           SSLFK + P  R QSTDIQAAA WGVAA TTALW++QPFDWIKKTFFEKP
Sbjct: 5   SSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDWIKKTFFEKP 54


>ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa protein
           [Vitis vinifera]
          Length = 59

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +2

Query: 188 ATGSSLFKSIRPKLRIQSTDIQAAALWGVAAGTTALWLVQPFDWIKKTFFEKPATEEK 361
           ++GS++FK ++P +R Q  DIQAAA WGVA  TTAL+LVQPFDW+KKTF EKP  EEK
Sbjct: 2   SSGSAMFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPDPEEK 59


>ref|NP_001060644.1| Os07g0680300 [Oryza sativa Japonica Group]
           gi|113612180|dbj|BAF22558.1| Os07g0680300 [Oryza sativa
           Japonica Group] gi|218200264|gb|EEC82691.1| hypothetical
           protein OsI_27348 [Oryza sativa Indica Group]
           gi|222637693|gb|EEE67825.1| hypothetical protein
           OsJ_25595 [Oryza sativa Japonica Group]
          Length = 61

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/56 (69%), Positives = 44/56 (78%)
 Frame = +2

Query: 188 ATGSSLFKSIRPKLRIQSTDIQAAALWGVAAGTTALWLVQPFDWIKKTFFEKPATE 355
           A+ S LF+ I P+ R QSTDI AAA WGV AGT A++LVQPFDWIKKTFFEKP  E
Sbjct: 5   ASSSGLFRFISPRRRPQSTDIAAAATWGVFAGTAAIYLVQPFDWIKKTFFEKPEPE 60


>sp|P48505.2|UCR11_SOLTU RecName: Full=Ubiquinol-cytochrome c reductase complex 6.7 kDa
           protein; Short=CR6 gi|633683|emb|CAA57768.1| cytochrome
           c reductase subunit [Solanum tuberosum]
          Length = 62

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = +2

Query: 173 MVAGSATGSSLFKSIRPKLRIQSTDIQAAALWGVAAGTTALWLVQPFDWIKKTFFEKPAT 352
           M + +A G+ LFK +RPKLR QSTDIQAAA WGVAA T ALW++QP+D+++KTF EK   
Sbjct: 1   MTSPAAAGNGLFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEE 60

Query: 353 EE 358
           E+
Sbjct: 61  EK 62


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