BLASTX nr result
ID: Cimicifuga21_contig00006707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006707
(832 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichoca... 163 5e-43
ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichoca... 161 1e-42
ref|XP_002521529.1| Disease resistance protein RGA2, putative [R... 160 8e-41
gb|ACP30629.1| disease resistance protein [Brassica rapa subsp. ... 166 1e-40
dbj|BAJ34431.1| unnamed protein product [Thellungiella halophila] 163 5e-40
>ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860619|gb|EEE98166.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 730
Score = 163 bits (412), Expect(2) = 5e-43
Identities = 94/207 (45%), Positives = 141/207 (68%), Gaps = 3/207 (1%)
Frame = +1
Query: 73 SLVELPKWIKKLQNLKILDLTKCKNLLSLHPDITFLQNLLVLDVGGCPFLQCLPRGLGSL 252
+L ELP I KL+NL++L L+ C NL L IT LQ L++LD+G CP +Q LP+G+G L
Sbjct: 483 ALKELPFSIGKLRNLQLLVLSGCNNLQKLPLSITALQKLILLDIGHCP-IQYLPQGIGRL 541
Query: 253 SKLQILSGFKLP-APGKNGATLRDLKGLKELRVLRIKLSKKDKIADEEVDFLSNLNKLEV 429
S LQ LSGFKL A K+G L +L+ L +LRVLR+ +S++ +IA+EE+ L++L +L+V
Sbjct: 542 SNLQELSGFKLVGADNKDGCRLAELQNLLQLRVLRVNISEESEIAEEELTVLTHLKQLKV 601
Query: 430 LSVGMKNWEKKQASQ-LDKLSAPRNLKRLCLKYYNEDVTPKWVNPGCLPKLEYLSIIDSQ 606
LS+ + +K++ Q L++LS P +L+ L L++Y +TP+W+NP L L+YL + +
Sbjct: 602 LSINSEGCDKEEIFQNLERLSPPPHLEELYLRHYRGVLTPQWINPTSLCHLQYLCMENGD 661
Query: 607 LKSMSTSFWESN-SNWKIEGLNLKSLP 684
+KS S F +N + WK+ GL LK LP
Sbjct: 662 IKSTSPVFEGTNGTTWKVVGLCLKFLP 688
Score = 38.1 bits (87), Expect(2) = 5e-43
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 687 LVMDWSTVQSKMKCLRYMKVRGCEKLCSFPC--DVFGNWKK 803
L M+W VQ M +RY++V C L SFPC D G W+K
Sbjct: 690 LHMEWEMVQRVMPRIRYVEVSHCYMLKSFPCNIDKLGVWRK 730
>ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|105923264|gb|ABF81467.1| NBS-LRR type disease
resistance protein [Populus trichocarpa]
gi|222867522|gb|EEF04653.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 855
Score = 161 bits (407), Expect(2) = 1e-42
Identities = 103/234 (44%), Positives = 144/234 (61%), Gaps = 7/234 (2%)
Frame = +1
Query: 4 VEDLLSQIKSQKLLAYLNLHGVDSLVELPKWIKKLQNLKILDLTKCKNLLSLHPDITFLQ 183
+E LLS I S + LAYLNL G L E+P I+KL+NL +L L +C +L LHP I++L+
Sbjct: 578 MEKLLSWIFSLQRLAYLNLSGAVGLKEMPSSIRKLRNLHLLILAECSDLTKLHPSISYLK 637
Query: 184 NLLVLDVGGCPFLQCLPRGLGSLSKLQILSGFKLPAPG-KNGATLRDLKGLKELRVLRIK 360
NL+VLD G C LQ LP+G+G+LS+LQ LSGF++ L +LK L +LRVLR+
Sbjct: 638 NLIVLDCGSCG-LQYLPQGIGNLSQLQELSGFRVVRQSTPQSCHLLELKQLVQLRVLRMN 696
Query: 361 LSKKDKIADEEVDFLSNLNKLEVLSVGMKNWEKKQ-ASQLDKLSAPRNLKRLCLKYYNED 537
LS + +I + E + LS L KL VL++ ++ + + LD+L P NLK L L+ Y
Sbjct: 697 LSNESEITESEGELLSKLVKLRVLAIDTEDCKDRTILEMLDRLHPPPNLKELYLRRYPHK 756
Query: 538 VTPKWVNPGCLPKLEYLSIID-SQLKSMSTSFWESNS---NWK-IEGLNLKSLP 684
PKW+NP L L+YL + + S LKS++ S +W +EGL LK LP
Sbjct: 757 SLPKWINPTKLSVLQYLCLENGSALKSINPSAHSEEEIAFSWNYLEGLCLKFLP 810
Score = 38.5 bits (88), Expect(2) = 1e-42
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 678 IAWLVMDWSTVQSKMKCLRYMKVRGCEKLCSFPCDVF--GNWKK 803
+ +L DW+ +Q M+ +RY++V C L +FPC V G W+K
Sbjct: 809 LPFLDEDWTDLQKTMQSIRYVEVSNCFNLKNFPCPVNKPGTWRK 852
>ref|XP_002521529.1| Disease resistance protein RGA2, putative [Ricinus communis]
gi|223539207|gb|EEF40800.1| Disease resistance protein
RGA2, putative [Ricinus communis]
Length = 848
Score = 160 bits (404), Expect(2) = 8e-41
Identities = 95/227 (41%), Positives = 135/227 (59%), Gaps = 3/227 (1%)
Frame = +1
Query: 10 DLLSQIKSQKLLAYLNLHGVDSLVELPKWIKKLQNLKILDLTKCKNLLSLHPDITFLQNL 189
+LL QI + L YL+L L+ELP ++KL+NL+ILD++ C+NL L P + + L
Sbjct: 572 NLLYQIGDLQHLTYLSLSNTHPLIELPPSLEKLKNLQILDMSYCQNLKMLPPYLITFKKL 631
Query: 190 LVLDVGGCPFLQCLPRGLGSLSKLQILSGFKLPAPGK-NGATLRDLKGLKELRVLRIKLS 366
VLDV C L+ LP+GLG LS L++L GF+ G+ G + +L+ L LR L + L+
Sbjct: 632 RVLDVSHCGSLEYLPKGLGRLSNLEVLMGFRPSRLGQLGGCRIAELRNLTRLRTLSLHLT 691
Query: 367 KKDKIADEEVDFLSNLNKLEVLSVGMKNWEKKQ-ASQLDKLSAPRNLKRLCLKYYNEDVT 543
+ D+I D EV+ L NL +LE L++ + + +LD+L P + L L +Y ++
Sbjct: 692 QGDEIEDNEVNALVNLQELEHLTISCFDSQGNDLIGKLDRLYPPPEIYELSLAFYPGKMS 751
Query: 544 PKWVNPGCLPKLEYLSIIDSQLKSMSTSFW-ESNSNWKIEGLNLKSL 681
P W+NP LP L YLSI L M SFW E NS WKIE L L+SL
Sbjct: 752 PVWLNPISLPMLRYLSISSGNLAQMHQSFWGEDNSVWKIEALLLESL 798
Score = 33.9 bits (76), Expect(2) = 8e-41
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 672 EVIAWLVMDWSTVQSKMKCLRYMKVRGCEKLCSFPCDVF----GNWKKE*RR 815
E ++ L MDWS +Q+ M LR + C L +FP + G W KE +R
Sbjct: 796 ESLSELGMDWSMIQNVMPSLRIVNSSWCPDLSAFPIEEIGFRGGVWTKEEQR 847
>gb|ACP30629.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 858
Score = 166 bits (419), Expect(2) = 1e-40
Identities = 89/229 (38%), Positives = 140/229 (61%), Gaps = 3/229 (1%)
Frame = +1
Query: 4 VEDLLSQIKSQKLLAYLNLHGVDSLVELPKWIKKLQNLKILDLTKCKNLLSLHPDITFLQ 183
+ D+L +I S K LA L++ L++LP+ ++ LQNL+ILD + C+NL L P I +
Sbjct: 580 LSDILDEIASLKHLACLSMSNTHPLIQLPRSMEDLQNLQILDASYCQNLKQLQPCIVLFK 639
Query: 184 NLLVLDVGGCPFLQCLPRGLGSLSKLQILSGFKLPAPGKNGATLRDLKGLKELRVLRIKL 363
LLVLD+ C L+ P+G+GSL L++L GFK P+ NG L +++ L LR L + L
Sbjct: 640 KLLVLDMTNCGSLEYFPKGIGSLGNLEVLLGFK-PSMSSNGCKLSEVRNLTNLRKLGLSL 698
Query: 364 SKKDKIADEEVDFLSNLNKLEVLSVG-MKNWEKKQASQLDKLSAPRNLKRLCLKYYNEDV 540
++ D+I ++E+D L NL+KL +LS+ ++ +++D L+ P L L L++Y +
Sbjct: 699 TRGDQIEEDELDSLVNLSKLMLLSINCYDSYGDNLITKIDALTPPHQLHELSLEFYPGKL 758
Query: 541 TPKWVNPGCLPKLEYLSIIDSQLKSMSTSFW--ESNSNWKIEGLNLKSL 681
+P W++P LP L Y+SI L M FW E+N++W+IE L SL
Sbjct: 759 SPSWLSPKRLPMLRYMSICSGNLAKMHQRFWETETNTHWRIEALMFHSL 807
Score = 27.7 bits (60), Expect(2) = 1e-40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 687 LVMDWSTVQSKMKCLRYMKVRGCEKLCSFPCDVFG 791
L MDW +Q M LR + C +L +FP + G
Sbjct: 810 LEMDWEELQLSMPYLRTVHANWCPELETFPIEDVG 844
>dbj|BAJ34431.1| unnamed protein product [Thellungiella halophila]
Length = 669
Score = 163 bits (413), Expect(2) = 5e-40
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 3/229 (1%)
Frame = +1
Query: 4 VEDLLSQIKSQKLLAYLNLHGVDSLVELPKWIKKLQNLKILDLTKCKNLLSLHPDITFLQ 183
+ D+L +I S + LA L++ L++ P+ +++L NL+ILD + C+NL L P I +
Sbjct: 391 LSDILDEIASLQHLACLSMSNTHPLIQFPRSMEELHNLQILDASYCQNLKQLQPCIVLFK 450
Query: 184 NLLVLDVGGCPFLQCLPRGLGSLSKLQILSGFKLPAPGKNGATLRDLKGLKELRVLRIKL 363
LLVLD+ C L+ P+G+GSL L++L GFK P+ NG L +++ L LR L + L
Sbjct: 451 KLLVLDMTNCGSLEYFPKGIGSLGNLEVLLGFK-PSRSNNGCKLSEVRNLTNLRKLGLSL 509
Query: 364 SKKDKIADEEVDFLSNLNKLEVLSVG-MKNWEKKQASQLDKLSAPRNLKRLCLKYYNEDV 540
++ D+I ++E+D L NL+KL +S+ ++ ++LD L+ P L L L++Y
Sbjct: 510 TRGDQIEEDELDSLINLSKLMFISINCYDSYGDDLITKLDALTPPHQLHELSLQFYPGKC 569
Query: 541 TPKWVNPGCLPKLEYLSIIDSQLKSMSTSFW--ESNSNWKIEGLNLKSL 681
+P W++P LP L Y+SI L M FW E+N++W+IEGL L SL
Sbjct: 570 SPSWLSPISLPMLRYMSICSGNLVKMHERFWGTETNTHWRIEGLMLNSL 618
Score = 27.7 bits (60), Expect(2) = 5e-40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 687 LVMDWSTVQSKMKCLRYMKVRGCEKLCSFPCDVFG 791
L MDW +Q M LR + C +L +FP + G
Sbjct: 621 LDMDWEELQRSMPYLRTVHANWCPELETFPIEDVG 655