BLASTX nr result

ID: Cimicifuga21_contig00006669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006669
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein ...   460   e-127
ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_002327243.1| predicted protein [Populus trichocarpa] gi|2...   435   e-119
ref|XP_004149414.1| PREDICTED: uncharacterized membrane protein ...   422   e-115
ref|NP_192696.3| SNARE associated Golgi protein [Arabidopsis tha...   421   e-115

>ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
            vinifera] gi|296081147|emb|CBI18173.3| unnamed protein
            product [Vitis vinifera]
          Length = 279

 Score =  460 bits (1183), Expect = e-127
 Identities = 229/279 (82%), Positives = 249/279 (89%), Gaps = 1/279 (0%)
 Frame = +3

Query: 336  MAAPRNFVSENGRQMDEENLKED-SPTSKKSSVAKFEGRFPLSRWELIAAIGVFLVFTTG 512
            MAAPRN  ++ GR  DEEN  ED SPT+KK +  K +GRFPL+RWE   A+GVF+ F+ G
Sbjct: 1    MAAPRNLGNDGGRLRDEENANEDDSPTTKKPAGVKIDGRFPLTRWEFTVALGVFVFFSIG 60

Query: 513  LISVYATMPAADYGRIKLPRTISDLRVLKDHLAMYANDYPAQFILGYCSTYIFMQTFMIP 692
            L  +Y TMPAA+YGRI+LPRTISDLR+LKD LA YANDYPAQFI+GYCSTYIFMQTFMIP
Sbjct: 61   LFCIYLTMPAAEYGRIRLPRTISDLRMLKDQLATYANDYPAQFIMGYCSTYIFMQTFMIP 120

Query: 693  GTIFMSLLAGALFGVIRGLVLVVVNATAGASSCYFLSKLIGRPLVSWLWPEKLRFFHAEI 872
            GTIFMSLLAGALFGV+RGL LVV NATAGASSCYFLSKLIGRPLV+WLWPEKLR F AEI
Sbjct: 121  GTIFMSLLAGALFGVVRGLFLVVFNATAGASSCYFLSKLIGRPLVNWLWPEKLRLFQAEI 180

Query: 873  AKRREKLLNYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATFVGLIPASYITVNAGLA 1052
            +KRREKLLNYMLFLRITPTLPN FINLASPIVDIPFHVFFLAT VGLIPASYITV AGLA
Sbjct: 181  SKRREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLA 240

Query: 1053 LGDLKSVKDLYDFKTLAVLFLIGSISIIPTILKRKRTYE 1169
            LGDLKSVKDLYDFKTL+VLFLIG ISI+PT+LKRKRTYE
Sbjct: 241  LGDLKSVKDLYDFKTLSVLFLIGFISILPTLLKRKRTYE 279


>ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|222862865|gb|EEF00372.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  437 bits (1123), Expect = e-120
 Identities = 218/264 (82%), Positives = 243/264 (92%), Gaps = 1/264 (0%)
 Frame = +3

Query: 381  DEENLKED-SPTSKKSSVAKFEGRFPLSRWELIAAIGVFLVFTTGLISVYATMPAADYGR 557
            DEE  KED SP++K+   AKFE RFPL+RWEL AA+GVF VF+TGL  +Y TMPAA+YG+
Sbjct: 3    DEEKAKEDDSPSAKR---AKFE-RFPLTRWELAAALGVFFVFSTGLFCIYLTMPAAEYGK 58

Query: 558  IKLPRTISDLRVLKDHLAMYANDYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 737
            +KLPRTISDLR+LKD+LA YAN+YPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV
Sbjct: 59   LKLPRTISDLRLLKDNLATYANEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 118

Query: 738  IRGLVLVVVNATAGASSCYFLSKLIGRPLVSWLWPEKLRFFHAEIAKRREKLLNYMLFLR 917
            +RG+ LVV NATAGASSC+FLSKLIGRPLV+WLWPEKLRFF AEIAKRR+KLLNYMLFLR
Sbjct: 119  VRGIFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKLRFFQAEIAKRRDKLLNYMLFLR 178

Query: 918  ITPTLPNTFINLASPIVDIPFHVFFLATFVGLIPASYITVNAGLALGDLKSVKDLYDFKT 1097
            +TPTLPN FINLASPIVDIPFH+FFLAT +GLIPASYITV AGLALGDLKSVKDLYD+KT
Sbjct: 179  VTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVRAGLALGDLKSVKDLYDYKT 238

Query: 1098 LAVLFLIGSISIIPTILKRKRTYE 1169
            L+VLF+IGSISI PT+LKRKR YE
Sbjct: 239  LSVLFIIGSISIFPTLLKRKRIYE 262


>ref|XP_002327243.1| predicted protein [Populus trichocarpa] gi|222835613|gb|EEE74048.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  435 bits (1119), Expect = e-119
 Identities = 217/264 (82%), Positives = 243/264 (92%), Gaps = 1/264 (0%)
 Frame = +3

Query: 381  DEENLKED-SPTSKKSSVAKFEGRFPLSRWELIAAIGVFLVFTTGLISVYATMPAADYGR 557
            DEE  KED SP++K+S   KFE RFPL+RWEL AA+GVFLVF+TGL  +Y TMPAADYG+
Sbjct: 3    DEEKAKEDDSPSAKRS---KFE-RFPLTRWELAAALGVFLVFSTGLFCIYLTMPAADYGK 58

Query: 558  IKLPRTISDLRVLKDHLAMYANDYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV 737
            +KLPR+ISDLR+LKD+LA Y ++YPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFG+
Sbjct: 59   LKLPRSISDLRLLKDNLATYVSEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGI 118

Query: 738  IRGLVLVVVNATAGASSCYFLSKLIGRPLVSWLWPEKLRFFHAEIAKRREKLLNYMLFLR 917
            +RGL LVV NATAGASSC+FLSKLIGRPLV+WLWPEK+RFF +EIAKR+EKLLNYMLFLR
Sbjct: 119  VRGLFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKMRFFQSEIAKRKEKLLNYMLFLR 178

Query: 918  ITPTLPNTFINLASPIVDIPFHVFFLATFVGLIPASYITVNAGLALGDLKSVKDLYDFKT 1097
            +TPTLPN FINLASPIVDIPFH+FFLAT +GLIPASYITV AGLALGDLKSVKDLYDFKT
Sbjct: 179  VTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVKAGLALGDLKSVKDLYDFKT 238

Query: 1098 LAVLFLIGSISIIPTILKRKRTYE 1169
            L+VLFLIGSISI PT+LKRKR YE
Sbjct: 239  LSVLFLIGSISIFPTLLKRKRIYE 262


>ref|XP_004149414.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis
            sativus]
          Length = 270

 Score =  422 bits (1085), Expect = e-115
 Identities = 215/271 (79%), Positives = 238/271 (87%), Gaps = 1/271 (0%)
 Frame = +3

Query: 360  SENGRQMDEENLKED-SPTSKKSSVAKFEGRFPLSRWELIAAIGVFLVFTTGLISVYATM 536
            S N    DEE LKED SPT+KK    KFE RFPL++WEL AA+G+FL+ +TGL+ VY TM
Sbjct: 4    SRNVGMRDEEKLKEDDSPTAKKP---KFE-RFPLTKWELAAALGIFLLCSTGLVCVYLTM 59

Query: 537  PAADYGRIKLPRTISDLRVLKDHLAMYANDYPAQFILGYCSTYIFMQTFMIPGTIFMSLL 716
            P+A+Y  +KLPRT+SDLRVLKD  A YA D+PAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 60   PSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 119

Query: 717  AGALFGVIRGLVLVVVNATAGASSCYFLSKLIGRPLVSWLWPEKLRFFHAEIAKRREKLL 896
            AGALFGVIRGL+LVV NATAGASSC+FLSKLIGRPLV W+WPEKL+ F AEIAK REKLL
Sbjct: 120  AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLL 179

Query: 897  NYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATFVGLIPASYITVNAGLALGDLKSVK 1076
            NYMLFLRITPTLPN FINLASPIVDIPFHVFFLAT +GL+PASYITV AGLALG+LKSVK
Sbjct: 180  NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVK 239

Query: 1077 DLYDFKTLAVLFLIGSISIIPTILKRKRTYE 1169
            DLYDFKTL+VLF IG ISI+PT+LKRKR YE
Sbjct: 240  DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270


>ref|NP_192696.3| SNARE associated Golgi protein [Arabidopsis thaliana]
            gi|75153817|sp|Q8L586.1|Y4958_ARATH RecName:
            Full=Uncharacterized membrane protein At4g09580
            gi|20465630|gb|AAM20146.1| unknown protein [Arabidopsis
            thaliana] gi|21281237|gb|AAM45090.1| unknown protein
            [Arabidopsis thaliana] gi|332657367|gb|AEE82767.1| SNARE
            associated Golgi protein [Arabidopsis thaliana]
          Length = 287

 Score =  421 bits (1083), Expect = e-115
 Identities = 215/291 (73%), Positives = 244/291 (83%), Gaps = 13/291 (4%)
 Frame = +3

Query: 336  MAAPRNFVSENG-RQM--DEEN----------LKEDSPTSKKSSVAKFEGRFPLSRWELI 476
            MAAPRN   + G RQ+  DEE+          L +DSPT K++       RFPLSRWE  
Sbjct: 1    MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTK----SERFPLSRWEFA 56

Query: 477  AAIGVFLVFTTGLISVYATMPAADYGRIKLPRTISDLRVLKDHLAMYANDYPAQFILGYC 656
                VFLVFTTGL  +Y TMPAA+YG++K+PRTISDLR+LK++L  YA++Y A+FILGYC
Sbjct: 57   VFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYC 116

Query: 657  STYIFMQTFMIPGTIFMSLLAGALFGVIRGLVLVVVNATAGASSCYFLSKLIGRPLVSWL 836
            STYIFMQTFMIPGTIFMSLLAGALFGV+RG VLVV+NATAGA SC+FLSKL+GRPLV+WL
Sbjct: 117  STYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWL 176

Query: 837  WPEKLRFFHAEIAKRREKLLNYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATFVGLI 1016
            WPEKLRFF AEIAKRR++LLNYMLFLRITPTLPN FINL+SPIVDIPFHVFFLAT VGL+
Sbjct: 177  WPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLM 236

Query: 1017 PASYITVNAGLALGDLKSVKDLYDFKTLAVLFLIGSISIIPTILKRKRTYE 1169
            PASYITV AGLALGDL+SVKDLYDFKTL+VLFLIGSISI P +LKRKR YE
Sbjct: 237  PASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKRVYE 287


Top